RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 NT5C1AQ9BXI3 368 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 POLDIP3Q9BY77 421 aaKnown RBP2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 KRTAP3-1Q9BYR8 98 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 SCAND2PQ9GZW5 306 aaPredicted RBP2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 LIME1Q9H400 295 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 ZNF696Q9H7X3 374 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 SEC61A2Q9H9S3 476 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 MSL2Q9HCI7 577 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 AGPAT5Q9NUQ2 364 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 KBTBD4Q9NVX7 518 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 DEC1Q9P2X7 70 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 MAGEC2Q9UBF1 373 aaPredicted RBP2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 SLC9A2Q9UBY0 812 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 KCNN3Q9UGI6 736 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 PCDHA12Q9UN75 941 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 COA3Q9Y2R0 106 aaPredicted RBP2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 NUB1Q9Y5A7 615 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 RAD54BQ9Y620 910 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 HS3ST3A1Q9Y663 406 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 SLC4A4Q9Y6R1 1079 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 ZNF532Q9HCE3 1301 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 CADP27708 2225 aa2.31□□□□□ -2.04
TRAV1-1-201ENST00000542354 A0A087WZ62 844 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 LY6G6EA0A0G2JKS1 128 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 A0A1W2PR77 199 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 CASTOR2A6NHX0 329 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 DRGXA6NNA5 263 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 CLDN4O14493 209 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 SLC9A3R1O14745 358 aaPredicted RBP2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 RAD1O60671 282 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 MBD4O95243 580 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 RAF1P04049 648 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 CHGBP05060 677 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 SLC3A2P08195 630 aaKnown RBP2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 TKTP29401 623 aaKnown RBP2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 ETV5P41161 510 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 RECQLP46063 649 aaPredicted RBP2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 GLRBP48167 497 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 DNM2P50570 870 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 CCL11P51671 97 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 METAP1P53582 386 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 ACTR2P61160 394 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 KRT85P78386 507 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 APBA1Q02410 837 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 GAD2Q05329 585 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 NCBP1Q09161 790 aaKnown RBP2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 OVGP1Q12889 678 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 DRP2Q13474 957 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 SEMA5AQ13591 1074 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 SNTB1Q13884 538 aaKnown RBP2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 VEPH1Q14D04 833 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 DHCR24Q15392 516 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 ZNF77Q15935 545 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 CTXN3Q4LDR2 81 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 ATP1A1-AS1Q5TC04 95 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 TXNDC8Q6A555 127 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 ZCCHC8Q6NZY4 707 aaKnown RBP2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 KDELC2Q7Z4H8 507 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 ZNF410Q86VK4 478 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 IQCHQ86VS3 1027 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 SGMS1Q86VZ5 419 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 MEX3DQ86XN8 651 aaKnown RBP2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 SPATS2Q86XZ4 545 aaKnown RBP2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 P3H2Q8IVL5 708 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 LRRC71Q8N4P6 559 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 RBMXL3Q8N7X1 1067 aaKnown RBP2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 TMEM145Q8NBT3 493 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 GSTCDQ8NEC7 633 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 GOT1L1Q8NHS2 421 aaPredicted RBP2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 SCFD1Q8WVM8 642 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 NAT6Q93015 286 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 TAAR9Q96RI9 348 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 GFM1Q96RP9 751 aaKnown RBP2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 SDF4Q9BRK5 362 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 FDXACB1Q9BRP7 624 aaPredicted RBP2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 FEM1AQ9BSK4 669 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 NOL6Q9H6R4 1146 aaKnown RBP2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 RPF1Q9H9Y2 349 aaKnown RBP2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 PLEKHA5Q9HAU0 1116 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 SGK2Q9HBY8 427 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 AURKAIP1Q9NWT8 199 aaPredicted RBP2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 UCKL1Q9NWZ5 548 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 CACNG4Q9UBN1 327 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 NKX1-2Q9UD57 310 aaPredicted RBP2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 USP25Q9UHP3 1055 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 FBXL5Q9UKA1 691 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 B3GNT3Q9Y2A9 372 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 PCDHGA3Q9Y5H0 932 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 U3KQA8 63 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 ZBED9Q6R2W3 1325 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 ARID2Q68CP9 1835 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 DOCK5Q9H7D0 1870 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 ZNF638Q14966 1978 aaKnown RBP2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 TNRC6AQ8NDV7 1962 aaKnown RBP2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 SCN8AQ9UQD0 1980 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 CKAP5Q14008 2032 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 ROS1P08922 2347 aa2.3□□□□□ -2.04
TRAV1-1-201ENST00000542354 USF3Q68DE3 2245 aa2.29□□□□□ -2.04
TRAV1-1-201ENST00000542354 MYO5AQ9Y4I1 1855 aaKnown RBP2.29□□□□□ -2.04
TRAV1-1-201ENST00000542354 PLIN4Q96Q06 1357 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms