RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 POU6F2P78424 691 aaPredicted RBP12.2□□□□□ -0.46
SPIDR-217ENST00000522117 MFSD7Q6UXD7 560 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 SLCO6A1Q86UG4 719 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 EPHX4Q8IUS5 362 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 MCOLN2Q8IZK6 566 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 TP53I13Q8NBR0 393 aaPredicted RBP12.2□□□□□ -0.46
SPIDR-217ENST00000522117 FAM110BQ8TC76 370 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 ASB9Q96DX5 294 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 SLITRK1Q96PX8 696 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 OR52B2Q96RD2 323 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 CITED4Q96RK1 184 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 PCDHAC1Q9H158 963 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 COG4Q9H9E3 785 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 VAT1LQ9HCJ6 419 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 PNPLA8Q9NP80 782 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 IFT80Q9P2H3 777 aaPredicted RBP12.2□□□□□ -0.46
SPIDR-217ENST00000522117 COPG2Q9UBF2 871 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 PCDHGC3Q9UN70 934 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 PCDHB4Q9Y5E5 795 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 TEX264Q9Y6I9 313 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 GAKO14976 1311 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 TCRBV3S1A0A5B6 114 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 SAC3D1A6NKF1 404 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 AXIN1O15169 862 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 HDAC3O15379 428 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 MAN1A2O60476 641 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 SYNCRIPO60506 623 aaKnown RBP12.2□□□□□ -0.46
SPIDR-217ENST00000522117 NDUFS2O75306 463 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 NTRK1P04629 796 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 SERPINE1P05121 402 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 RALBP11234 206 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 RPL22P35268 128 aaKnown RBP12.2□□□□□ -0.46
SPIDR-217ENST00000522117 GABRB2P47870 512 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 AP2S1P53680 142 aaPredicted RBP12.2□□□□□ -0.46
SPIDR-217ENST00000522117 GJA9P57773 515 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 NLRP11P59045 1033 aaKnown RBP12.2□□□□□ -0.46
SPIDR-217ENST00000522117 PPP3CAQ08209 521 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 CEP55Q53EZ4 464 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 PAGE2BQ5JRK9 111 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 SUSD4Q5VX71 490 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 LYSMD2Q8IV50 215 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 LGI2Q8N0V4 545 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 PACRGLQ8N7B6 248 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 PSD4Q8NDX1 1056 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 RP9Q8TA86 221 aaKnown RBP12.2□□□□□ -0.46
SPIDR-217ENST00000522117 PNPT1Q8TCS8 783 aaKnown RBP12.2□□□□□ -0.46
SPIDR-217ENST00000522117 MAPK15Q8TD08 544 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 OMA1Q96E52 524 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 SLC39A13Q96H72 371 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 CNDP1Q96KN2 507 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 DEPDC7Q96QD5 511 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 GDF15Q99988 308 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 TMEM47Q9BQJ4 181 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 SLA2Q9H6Q3 261 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 SRP68Q9UHB9 627 aaKnown RBP12.2□□□□□ -0.46
SPIDR-217ENST00000522117 TRPC5Q9UL62 973 aaPredicted RBP12.2□□□□□ -0.46
SPIDR-217ENST00000522117 VANGL2Q9ULK5 521 aa12.2□□□□□ -0.46
SPIDR-217ENST00000522117 KIAA1551Q9HCM1 1747 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 C12orf71A8MTZ7 269 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 NRP1O14786 923 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 TIPRLO75663 272 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 CALCAP01258 141 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 ATF7P17544 494 aaPredicted RBP12.19□□□□□ -0.46
SPIDR-217ENST00000522117 CD9P21926 228 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 CYP2C18P33260 490 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 BST2Q10589 180 aaKnown RBP12.19□□□□□ -0.46
SPIDR-217ENST00000522117 IKQ13123 557 aaPredicted RBP12.19□□□□□ -0.46
SPIDR-217ENST00000522117 SNTA1Q13424 505 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 C2CD6Q53TS8 623 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 Q5BKY6 102 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 DALRD3Q5D0E6 543 aaKnown RBP12.19□□□□□ -0.46
SPIDR-217ENST00000522117 PMF1Q6P1K2 205 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 DCUN1D2Q6PH85 259 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 CRTC3Q6UUV7 619 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 OR6Q1Q8NGQ2 317 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 RBM14Q96PK6 669 aaKnown RBP12.19□□□□□ -0.46
SPIDR-217ENST00000522117 SMYD2Q9NRG4 433 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 MOCS1Q9NZB8 636 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 DNMT3LQ9UJW3 386 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 ZNRF3Q9ULT6 936 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 CAB39Q9Y376 341 aaPredicted RBP12.19□□□□□ -0.46
SPIDR-217ENST00000522117 PMF1-BGLAPU3KQ54 211 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 UGT2B11O75310 529 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 GSNP06396 782 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 EVI2BP34910 448 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 ARCN1P48444 511 aaKnown RBP12.19□□□□□ -0.46
SPIDR-217ENST00000522117 HCAR3P49019 387 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 ALDH7A1P49419 539 aaKnown RBP12.19□□□□□ -0.46
SPIDR-217ENST00000522117 HARS2P49590 506 aaKnown RBP12.19□□□□□ -0.46
SPIDR-217ENST00000522117 ADCY7P51828 1080 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 MRPS15P82914 257 aaKnown RBP12.19□□□□□ -0.46
SPIDR-217ENST00000522117 EN1Q05925 392 aaPredicted RBP12.19□□□□□ -0.46
SPIDR-217ENST00000522117 ILF2Q12905 390 aaKnown RBP12.19□□□□□ -0.46
SPIDR-217ENST00000522117 RFTN1Q14699 578 aaPredicted RBP12.19□□□□□ -0.46
SPIDR-217ENST00000522117 PCLAFQ15004 111 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 DESI1Q6ICB0 168 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 ZNF600Q6ZNG1 722 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 GALNT12Q8IXK2 581 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 GRPEL2Q8TAA5 225 aa12.19□□□□□ -0.46
SPIDR-217ENST00000522117 SLC35B2Q8TB61 432 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms