RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 ARSFP54793 590 aa7.81□□□□□ -1.16
NUP54-215ENST00000514313 GOLGA8DPQ0D2H9 430 aa7.81□□□□□ -1.16
NUP54-215ENST00000514313 EPS8Q12929 822 aa7.81□□□□□ -1.16
NUP54-215ENST00000514313 TAF11Q15544 211 aa7.81□□□□□ -1.16
NUP54-215ENST00000514313 CCDC96Q2M329 555 aa7.81□□□□□ -1.16
NUP54-215ENST00000514313 PLK5Q496M5 336 aa7.81□□□□□ -1.16
NUP54-215ENST00000514313 ATG9BQ674R7 924 aa7.81□□□□□ -1.16
NUP54-215ENST00000514313 KLHL35Q6PF15 583 aa7.81□□□□□ -1.16
NUP54-215ENST00000514313 GPAT4Q86UL3 456 aa7.81□□□□□ -1.16
NUP54-215ENST00000514313 FAM47BQ8NA70 645 aa7.81□□□□□ -1.16
NUP54-215ENST00000514313 FAR1Q8WVX9 515 aa7.81□□□□□ -1.16
NUP54-215ENST00000514313 KAT2AQ92830 837 aa7.81□□□□□ -1.16
NUP54-215ENST00000514313 KAT2BQ92831 832 aa7.81□□□□□ -1.16
NUP54-215ENST00000514313 ASB2Q96Q27 587 aa7.81□□□□□ -1.16
NUP54-215ENST00000514313 STRA6Q9BX79 667 aa7.81□□□□□ -1.16
NUP54-215ENST00000514313 ASB6Q9NWX5 421 aa7.81□□□□□ -1.16
NUP54-215ENST00000514313 FBXO40Q9UH90 709 aa7.81□□□□□ -1.16
NUP54-215ENST00000514313 A4GNTQ9UNA3 340 aa7.81□□□□□ -1.16
NUP54-215ENST00000514313 CYP2D7A0A087X1C5 515 aa7.8□□□□□ -1.16
NUP54-215ENST00000514313 CBY3A6NI87 242 aa7.8□□□□□ -1.16
NUP54-215ENST00000514313 MYO1GB0I1T2 1018 aa7.8□□□□□ -1.16
NUP54-215ENST00000514313 PLAUP00749 431 aa7.8□□□□□ -1.16
NUP54-215ENST00000514313 WT1P19544 449 aaPredicted RBP7.8□□□□□ -1.16
NUP54-215ENST00000514313 YPEL5P62699 121 aa7.8□□□□□ -1.16
NUP54-215ENST00000514313 IFI35P80217 286 aaPredicted RBP7.8□□□□□ -1.16
NUP54-215ENST00000514313 FRG1Q14331 258 aaKnown RBP7.8□□□□□ -1.16
NUP54-215ENST00000514313 DPCR1Q3MIW9 517 aa7.8□□□□□ -1.16
NUP54-215ENST00000514313 TBC1D9BQ66K14 1250 aa7.8□□□□□ -1.16
NUP54-215ENST00000514313 TXNDC8Q6A555 127 aa7.8□□□□□ -1.16
NUP54-215ENST00000514313 CHSY1Q86X52 802 aa7.8□□□□□ -1.16
NUP54-215ENST00000514313 ARL14EPQ8N8R7 260 aaPredicted RBP7.8□□□□□ -1.16
NUP54-215ENST00000514313 CAGE1Q8TC20 777 aa7.8□□□□□ -1.16
NUP54-215ENST00000514313 CMTM3Q96MX0 182 aa7.8□□□□□ -1.16
NUP54-215ENST00000514313 IKZF4Q9H2S9 585 aa7.8□□□□□ -1.16
NUP54-215ENST00000514313 TOR3AQ9H497 397 aa7.8□□□□□ -1.16
NUP54-215ENST00000514313 KAT14Q9H8E8 782 aa7.8□□□□□ -1.16
NUP54-215ENST00000514313 FBRSL1Q9HCM7 1045 aaKnown RBP7.8□□□□□ -1.16
NUP54-215ENST00000514313 ZNF304Q9HCX3 659 aa7.8□□□□□ -1.16
NUP54-215ENST00000514313 SLC17A6Q9P2U8 582 aa7.8□□□□□ -1.16
NUP54-215ENST00000514313 PCDHGB5Q9Y5G0 923 aa7.8□□□□□ -1.16
NUP54-215ENST00000514313 SLC22A23A1A5C7 686 aa7.79□□□□□ -1.16
NUP54-215ENST00000514313 FRMD3A2A2Y4 597 aa7.79□□□□□ -1.16
NUP54-215ENST00000514313 INPPL1O15357 1258 aa7.79□□□□□ -1.16
NUP54-215ENST00000514313 BEST1O76090 585 aa7.79□□□□□ -1.16
NUP54-215ENST00000514313 NFATC1O95644 943 aa7.79□□□□□ -1.16
NUP54-215ENST00000514313 HEXAP06865 529 aa7.79□□□□□ -1.16
NUP54-215ENST00000514313 ADRB2P07550 413 aa7.79□□□□□ -1.16
NUP54-215ENST00000514313 CYP2A6P11509 494 aaPredicted RBP7.79□□□□□ -1.16
NUP54-215ENST00000514313 CACNA2D1P54289 1103 aa7.79□□□□□ -1.16
NUP54-215ENST00000514313 SOX10P56693 466 aa7.79□□□□□ -1.16
NUP54-215ENST00000514313 STK4Q13043 487 aa7.79□□□□□ -1.16
NUP54-215ENST00000514313 PGM5Q15124 567 aa7.79□□□□□ -1.16
NUP54-215ENST00000514313 RNPS1Q15287 305 aaKnown RBP7.79□□□□□ -1.16
NUP54-215ENST00000514313 CERKLQ49MI3 558 aaPredicted RBP7.79□□□□□ -1.16
NUP54-215ENST00000514313 AKNAD1Q5T1N1 836 aa7.79□□□□□ -1.16
NUP54-215ENST00000514313 TMEM268Q5VZI3 342 aa7.79□□□□□ -1.16
NUP54-215ENST00000514313 WDR5BQ86VZ2 330 aa7.79□□□□□ -1.16
NUP54-215ENST00000514313 CCDC25Q86WR0 208 aa7.79□□□□□ -1.16
NUP54-215ENST00000514313 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.79□□□□□ -1.16
NUP54-215ENST00000514313 TAGAPQ8N103 731 aa7.79□□□□□ -1.16
NUP54-215ENST00000514313 PNLDC1Q8NA58 520 aaKnown RBP7.79□□□□□ -1.16
NUP54-215ENST00000514313 GTF3C6Q969F1 213 aa7.79□□□□□ -1.16
NUP54-215ENST00000514313 FEM1CQ96JP0 617 aa7.79□□□□□ -1.16
NUP54-215ENST00000514313 MAP7D2Q96T17 732 aa7.79□□□□□ -1.16
NUP54-215ENST00000514313 ZNF747Q9BV97 191 aa7.79□□□□□ -1.16
NUP54-215ENST00000514313 KLK15Q9H2R5 256 aa7.79□□□□□ -1.16
NUP54-215ENST00000514313 HIPK3Q9H422 1215 aa7.79□□□□□ -1.16
NUP54-215ENST00000514313 SMARCAD1Q9H4L7 1026 aa7.79□□□□□ -1.16
NUP54-215ENST00000514313 NFKBIL1Q9UBC1 381 aaPredicted RBP7.79□□□□□ -1.16
NUP54-215ENST00000514313 ADGRF5Q8IZF2 1346 aa7.78□□□□□ -1.16
NUP54-215ENST00000514313 LRRC53A6NM62 1247 aa7.78□□□□□ -1.16
NUP54-215ENST00000514313 EIF3CLB5ME19 914 aaKnown RBP7.78□□□□□ -1.16
NUP54-215ENST00000514313 OR2C1O95371 312 aa7.78□□□□□ -1.16
NUP54-215ENST00000514313 KRT4P19013 534 aa7.78□□□□□ -1.16
NUP54-215ENST00000514313 KLRC2P26717 231 aa7.78□□□□□ -1.16
NUP54-215ENST00000514313 CHRNA5P30532 468 aa7.78□□□□□ -1.16
NUP54-215ENST00000514313 UBA7P41226 1012 aa7.78□□□□□ -1.16
NUP54-215ENST00000514313 YWHAZP63104 245 aaKnown RBP7.78□□□□□ -1.16
NUP54-215ENST00000514313 POU5F1Q01860 360 aaKnown RBP7.78□□□□□ -1.16
NUP54-215ENST00000514313 IRF3Q14653 427 aa7.78□□□□□ -1.16
NUP54-215ENST00000514313 CRYMQ14894 314 aa7.78□□□□□ -1.16
NUP54-215ENST00000514313 ALG11Q2TAA5 492 aa7.78□□□□□ -1.16
NUP54-215ENST00000514313 FBLN7Q53RD9 439 aa7.78□□□□□ -1.16
NUP54-215ENST00000514313 FAM133BQ5BKY9 247 aaKnown RBP7.78□□□□□ -1.16
NUP54-215ENST00000514313 CHST9Q7L1S5 443 aa7.78□□□□□ -1.16
NUP54-215ENST00000514313 ARHGAP12Q8IWW6 846 aa7.78□□□□□ -1.16
NUP54-215ENST00000514313 ADGRF2Q8IZF7 708 aa7.78□□□□□ -1.16
NUP54-215ENST00000514313 NEK9Q8TD19 979 aa7.78□□□□□ -1.16
NUP54-215ENST00000514313 PSPC1Q8WXF1 523 aaKnown RBP7.78□□□□□ -1.16
NUP54-215ENST00000514313 SARAFQ96BY9 339 aa7.78□□□□□ -1.16
NUP54-215ENST00000514313 EFHD1Q9BUP0 239 aa7.78□□□□□ -1.16
NUP54-215ENST00000514313 AP1M1Q9BXS5 423 aa7.78□□□□□ -1.16
NUP54-215ENST00000514313 NUF2Q9BZD4 464 aa7.78□□□□□ -1.16
NUP54-215ENST00000514313 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.77□□□□□ -1.17
NUP54-215ENST00000514313 A0A1W2PQ09 198 aa7.77□□□□□ -1.17
NUP54-215ENST00000514313 ERAL1O75616 437 aaKnown RBP7.77□□□□□ -1.17
NUP54-215ENST00000514313 NEURL1O76050 574 aa7.77□□□□□ -1.17
NUP54-215ENST00000514313 SLC2A4P14672 509 aa7.77□□□□□ -1.17
NUP54-215ENST00000514313 IL11P20809 199 aa7.77□□□□□ -1.17
NUP54-215ENST00000514313 GPD1P21695 349 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms