RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 RNMTO43148 476 aaKnown RBP5.78□□□□□ -1.48
SSR3-208ENST00000496050 UGDHO60701 494 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 NEURL1O76050 574 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 TMCC1O94876 653 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 SLC2A4P14672 509 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 ZNF8P17098 575 aaPredicted RBP5.78□□□□□ -1.48
SSR3-208ENST00000496050 POU1F1P28069 291 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 SLC16A2P36021 539 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 MLH1P40692 756 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 SLC10A2Q12908 348 aaPredicted RBP5.78□□□□□ -1.48
SSR3-208ENST00000496050 VEPH1Q14D04 833 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 ALG10Q5BKT4 473 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 ALG10BQ5I7T1 473 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 LCE4AQ5TA78 99 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 SERTAD4-AS1Q5TG53 156 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 CPLX2Q6PUV4 134 aaKnown RBP5.78□□□□□ -1.48
SSR3-208ENST00000496050 PCSK4Q6UW60 755 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 MOB3CQ70IA8 216 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 GSTA5Q7RTV2 222 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 SLC46A3Q7Z3Q1 461 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 FAM185AQ8N0U4 392 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 SMARCE1Q969G3 411 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 NUDT16L1Q9BRJ7 211 aaKnown RBP5.78□□□□□ -1.48
SSR3-208ENST00000496050 PIMREGQ9BSJ6 248 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 H2AFJQ9BTM1 129 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 TUBB6Q9BUF5 446 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 ITPAQ9BY32 194 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 PCED1AQ9H1Q7 454 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 GHITMQ9H3K2 345 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 SYNCQ9H7C4 482 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 BRF2Q9HAW0 419 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 SNTG1Q9NSN8 517 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 C20orf141Q9NUB4 165 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 SEPT11Q9NVA2 429 aaKnown RBP5.78□□□□□ -1.48
SSR3-208ENST00000496050 HCFC1R1Q9NWW0 138 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 EHD2Q9NZN4 543 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 HSPB7Q9UBY9 170 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 CDH22Q9UJ99 828 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 ING1Q9UK53 422 aaPredicted RBP5.78□□□□□ -1.48
SSR3-208ENST00000496050 UTS2RQ9UKP6 389 aa5.78□□□□□ -1.48
SSR3-208ENST00000496050 POLR2AP24928 1970 aaKnown RBP5.77□□□□□ -1.49
SSR3-208ENST00000496050 LRRC53A6NM62 1247 aa5.77□□□□□ -1.49
SSR3-208ENST00000496050 RHODO00212 210 aa5.77□□□□□ -1.49
SSR3-208ENST00000496050 TGFB1I1O43294 461 aa5.77□□□□□ -1.49
SSR3-208ENST00000496050 NUDT3O95989 172 aa5.77□□□□□ -1.49
SSR3-208ENST00000496050 CERS1P27544 350 aa5.77□□□□□ -1.49
SSR3-208ENST00000496050 DPP6P42658 865 aa5.77□□□□□ -1.49
SSR3-208ENST00000496050 CLCNKBP51801 687 aa5.77□□□□□ -1.49
SSR3-208ENST00000496050 TMEM115Q12893 351 aaPredicted RBP5.77□□□□□ -1.49
SSR3-208ENST00000496050 FOXF2Q12947 444 aa5.77□□□□□ -1.49
SSR3-208ENST00000496050 MEA1Q16626 185 aa5.77□□□□□ -1.49
SSR3-208ENST00000496050 HIST2H2ACQ16777 129 aaPredicted RBP5.77□□□□□ -1.49
SSR3-208ENST00000496050 ZNF788Q6ZQV5 615 aa5.77□□□□□ -1.49
SSR3-208ENST00000496050 IKBIPQ70UQ0 350 aa5.77□□□□□ -1.49
SSR3-208ENST00000496050 GPAT4Q86UL3 456 aa5.77□□□□□ -1.49
SSR3-208ENST00000496050 TMC8Q8IU68 726 aa5.77□□□□□ -1.49
SSR3-208ENST00000496050 GALNT16Q8N428 558 aa5.77□□□□□ -1.49
SSR3-208ENST00000496050 DPP10Q8N608 796 aa5.77□□□□□ -1.49
SSR3-208ENST00000496050 CREB3L4Q8TEY5 395 aa5.77□□□□□ -1.49
SSR3-208ENST00000496050 TMEM170AQ8WVE7 144 aa5.77□□□□□ -1.49
SSR3-208ENST00000496050 SNRNP27Q8WVK2 155 aaKnown RBP5.77□□□□□ -1.49
SSR3-208ENST00000496050 CHFRQ96EP1 664 aa5.77□□□□□ -1.49
SSR3-208ENST00000496050 RSRC1Q96IZ7 334 aaKnown RBP5.77□□□□□ -1.49
SSR3-208ENST00000496050 AGAP2Q99490 1192 aa5.77□□□□□ -1.49
SSR3-208ENST00000496050 PIP5K1AQ99755 562 aa5.77□□□□□ -1.49
SSR3-208ENST00000496050 SCNM1Q9BWG6 230 aa5.77□□□□□ -1.49
SSR3-208ENST00000496050 HEMGNQ9BXL5 484 aa5.77□□□□□ -1.49
SSR3-208ENST00000496050 IKZF4Q9H2S9 585 aa5.77□□□□□ -1.49
SSR3-208ENST00000496050 MUC13Q9H3R2 512 aa5.77□□□□□ -1.49
SSR3-208ENST00000496050 CXorf56Q9H5V9 222 aa5.77□□□□□ -1.49
SSR3-208ENST00000496050 PAPOLBQ9NRJ5 636 aaKnown RBP5.77□□□□□ -1.49
SSR3-208ENST00000496050 LIMA1Q9UHB6 759 aaKnown RBP5.77□□□□□ -1.49
SSR3-208ENST00000496050 A4GNTQ9UNA3 340 aa5.77□□□□□ -1.49
SSR3-208ENST00000496050 KCNE2Q9Y6J6 123 aa5.77□□□□□ -1.49
SSR3-208ENST00000496050 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.76□□□□□ -1.49
SSR3-208ENST00000496050 C17orf102A2RUQ5 167 aa5.76□□□□□ -1.49
SSR3-208ENST00000496050 MANSC4A6NHS7 340 aaPredicted RBP5.76□□□□□ -1.49
SSR3-208ENST00000496050 FOXO6A8MYZ6 492 aa5.76□□□□□ -1.49
SSR3-208ENST00000496050 EIF3CLB5ME19 914 aaKnown RBP5.76□□□□□ -1.49
SSR3-208ENST00000496050 F8W810 466 aa5.76□□□□□ -1.49
SSR3-208ENST00000496050 PTPN2P17706 415 aa5.76□□□□□ -1.49
SSR3-208ENST00000496050 MAPK4P31152 587 aa5.76□□□□□ -1.49
SSR3-208ENST00000496050 HOXD13P35453 343 aa5.76□□□□□ -1.49
SSR3-208ENST00000496050 GABRB2P47870 512 aa5.76□□□□□ -1.49
SSR3-208ENST00000496050 GNAQP50148 359 aa5.76□□□□□ -1.49
SSR3-208ENST00000496050 RPS13P62277 151 aaKnown RBP5.76□□□□□ -1.49
SSR3-208ENST00000496050 COL10A1Q03692 680 aa5.76□□□□□ -1.49
SSR3-208ENST00000496050 GOLGA8DPQ0D2H9 430 aa5.76□□□□□ -1.49
SSR3-208ENST00000496050 ME3Q16798 604 aa5.76□□□□□ -1.49
SSR3-208ENST00000496050 ZNF782Q6ZMW2 699 aaPredicted RBP5.76□□□□□ -1.49
SSR3-208ENST00000496050 CADM4Q8NFZ8 388 aa5.76□□□□□ -1.49
SSR3-208ENST00000496050 NEK9Q8TD19 979 aa5.76□□□□□ -1.49
SSR3-208ENST00000496050 INTS12Q96CB8 462 aaKnown RBP5.76□□□□□ -1.49
SSR3-208ENST00000496050 MAP7D2Q96T17 732 aa5.76□□□□□ -1.49
SSR3-208ENST00000496050 TMEM45AQ9NWC5 275 aa5.76□□□□□ -1.49
SSR3-208ENST00000496050 VPS28Q9UK41 221 aa5.76□□□□□ -1.49
SSR3-208ENST00000496050 SLC4A4Q9Y6R1 1079 aa5.76□□□□□ -1.49
SSR3-208ENST00000496050 A0A0A0MQY5 61 aa5.75□□□□□ -1.49
SSR3-208ENST00000496050 KIR2DS5A0A0G2JLQ3 304 aa5.75□□□□□ -1.49
SSR3-208ENST00000496050 PTGES3LE9PB15 166 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms