RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 LRRN4Q8WUT4 740 aa13.82□□□□□ -0.2
FDPS-219ENST00000495308 ISG20Q96AZ6 181 aaKnown RBP13.82□□□□□ -0.2
FDPS-219ENST00000495308 RNF157Q96PX1 679 aa13.82□□□□□ -0.2
FDPS-219ENST00000495308 OMDQ99983 421 aa13.82□□□□□ -0.2
FDPS-219ENST00000495308 GPR174Q9BXC1 333 aa13.82□□□□□ -0.2
FDPS-219ENST00000495308 ZDHHC6Q9H6R6 413 aa13.82□□□□□ -0.2
FDPS-219ENST00000495308 FBXL12Q9NXK8 326 aa13.82□□□□□ -0.2
FDPS-219ENST00000495308 WSB2Q9NYS7 404 aaPredicted RBP13.82□□□□□ -0.2
FDPS-219ENST00000495308 NCDNQ9UBB6 729 aa13.82□□□□□ -0.2
FDPS-219ENST00000495308 HECAQ9UBI9 543 aaPredicted RBP13.82□□□□□ -0.2
FDPS-219ENST00000495308 LHX3Q9UBR4 397 aa13.82□□□□□ -0.2
FDPS-219ENST00000495308 IL36AQ9UHA7 158 aa13.82□□□□□ -0.2
FDPS-219ENST00000495308 IPO11Q9UI26 975 aaKnown RBP13.82□□□□□ -0.2
FDPS-219ENST00000495308 PPM1HQ9ULR3 514 aa13.82□□□□□ -0.2
FDPS-219ENST00000495308 SCML1Q9UN30 329 aa13.82□□□□□ -0.2
FDPS-219ENST00000495308 FARP1Q9Y4F1 1045 aaPredicted RBP13.82□□□□□ -0.2
FDPS-219ENST00000495308 CAPN6Q9Y6Q1 641 aa13.82□□□□□ -0.2
FDPS-219ENST00000495308 ADAMTS9Q9P2N4 1935 aa13.82□□□□□ -0.2
FDPS-219ENST00000495308 RIF1Q5UIP0 2472 aaKnown RBP13.81□□□□□ -0.2
FDPS-219ENST00000495308 C1QTNF3-AMACRE9PGA6 284 aa13.81□□□□□ -0.2
FDPS-219ENST00000495308 KPNA3O00505 521 aaPredicted RBP13.81□□□□□ -0.2
FDPS-219ENST00000495308 LEFTY1O75610 366 aa13.81□□□□□ -0.2
FDPS-219ENST00000495308 PALMO75781 387 aa13.81□□□□□ -0.2
FDPS-219ENST00000495308 RHOBTB1O94844 696 aa13.81□□□□□ -0.2
FDPS-219ENST00000495308 DRD3P35462 400 aa13.81□□□□□ -0.2
FDPS-219ENST00000495308 PTGER3P43115 390 aa13.81□□□□□ -0.2
FDPS-219ENST00000495308 DHPSP49366 369 aaPredicted RBP13.81□□□□□ -0.2
FDPS-219ENST00000495308 DYNLT1P63172 113 aa13.81□□□□□ -0.2
FDPS-219ENST00000495308 IL10RBQ08334 325 aa13.81□□□□□ -0.2
FDPS-219ENST00000495308 GSE1Q14687 1217 aa13.81□□□□□ -0.2
FDPS-219ENST00000495308 CCDC6Q16204 474 aa13.81□□□□□ -0.2
FDPS-219ENST00000495308 ARSIQ5FYB1 569 aa13.81□□□□□ -0.2
FDPS-219ENST00000495308 ALYREFQ86V81 257 aaKnown RBP13.81□□□□□ -0.2
FDPS-219ENST00000495308 RFX6Q8HWS3 928 aa13.81□□□□□ -0.2
FDPS-219ENST00000495308 KATNAL2Q8IYT4 538 aa13.81□□□□□ -0.2
FDPS-219ENST00000495308 HDDC3Q8N4P3 179 aa13.81□□□□□ -0.2
FDPS-219ENST00000495308 PLD5Q8N7P1 536 aa13.81□□□□□ -0.2
FDPS-219ENST00000495308 OR2AP1Q8NGE2 309 aa13.81□□□□□ -0.2
FDPS-219ENST00000495308 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.81□□□□□ -0.2
FDPS-219ENST00000495308 CASKIN2Q8WXE0 1202 aa13.81□□□□□ -0.2
FDPS-219ENST00000495308 ANP32BQ92688 251 aaKnown RBP13.81□□□□□ -0.2
FDPS-219ENST00000495308 ARRDC3Q96B67 414 aa13.81□□□□□ -0.2
FDPS-219ENST00000495308 CALR3Q96L12 384 aaKnown RBP13.81□□□□□ -0.2
FDPS-219ENST00000495308 HINFPQ9BQA5 517 aa13.81□□□□□ -0.2
FDPS-219ENST00000495308 GUCA1BQ9UMX6 200 aa13.81□□□□□ -0.2
FDPS-219ENST00000495308 NCKAP1Q9Y2A7 1128 aa13.81□□□□□ -0.2
FDPS-219ENST00000495308 WASF2Q9Y6W5 498 aa13.81□□□□□ -0.2
FDPS-219ENST00000495308 ATXN2Q99700 1313 aaKnown RBP13.81□□□□□ -0.2
FDPS-219ENST00000495308 EP300Q09472 2414 aaPredicted RBP13.81□□□□□ -0.2
FDPS-219ENST00000495308 PIEZO1Q92508 2521 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 ZNF487B1APH4 448 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 KRIT1O00522 736 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 NRDCO43847 1150 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 MAFKO60675 156 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 EPN2O95208 641 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 FTCDO95954 541 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 IGSF6O95976 241 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 GSRP00390 522 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 PRNPP04156 253 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 CCDC175P0C221 793 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 KRT10P13645 584 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 C5AR1P21730 350 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 OXTRP30559 389 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 CTNNA1P35221 906 aaKnown RBP13.8□□□□□ -0.2
FDPS-219ENST00000495308 CDKN2BP42772 138 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 RGRP47804 291 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 SNRPD1P62314 119 aaKnown RBP13.8□□□□□ -0.2
FDPS-219ENST00000495308 GALNT2Q10471 571 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 CNTN1Q12860 1018 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 SLC10A2Q12908 348 aaPredicted RBP13.8□□□□□ -0.2
FDPS-219ENST00000495308 IFI16Q16666 785 aaKnown RBP13.8□□□□□ -0.2
FDPS-219ENST00000495308 FAM46CQ5VWP2 391 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 KAZNQ674X7 775 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 NPNTQ6UXI9 565 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 SPOCD1Q6ZMY3 1216 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 USP30Q70CQ3 517 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 NT5DC3Q86UY8 548 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 SLC41A1Q8IVJ1 513 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 CCDC50Q8IVM0 306 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 TSEN2Q8NCE0 465 aaKnown RBP13.8□□□□□ -0.2
FDPS-219ENST00000495308 TMIEQ8NEW7 156 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 VOPP1Q96AW1 172 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 HSPA12BQ96MM6 686 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 GDAP1L1Q96MZ0 367 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 ZNF830Q96NB3 372 aaPredicted RBP13.8□□□□□ -0.2
FDPS-219ENST00000495308 HEPHQ9BQS7 1158 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 CINPQ9BW66 212 aaPredicted RBP13.8□□□□□ -0.2
FDPS-219ENST00000495308 MAK16Q9BXY0 300 aaKnown RBP13.8□□□□□ -0.2
FDPS-219ENST00000495308 BTBD1Q9H0C5 482 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 NEUROG2Q9H2A3 272 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 ARRDC1-AS1Q9H2J1 176 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 C6orf106Q9H6K1 298 aaPredicted RBP13.8□□□□□ -0.2
FDPS-219ENST00000495308 LZTFL1Q9NQ48 299 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 DTLQ9NZJ0 730 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 EVLQ9UI08 416 aaPredicted RBP13.8□□□□□ -0.2
FDPS-219ENST00000495308 GMEB2Q9UKD1 530 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 PACSIN2Q9UNF0 486 aaPredicted RBP13.8□□□□□ -0.2
FDPS-219ENST00000495308 HEY1Q9Y5J3 304 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 GON4LQ3T8J9 2241 aa13.8□□□□□ -0.2
FDPS-219ENST00000495308 FAM186AA6NE01 2351 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms