RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 PCDHB9Q9Y5E1 797 aa11.42□□□□□ -0.58
RFFL-204ENST00000414419 ACTL7AQ9Y615 435 aa11.42□□□□□ -0.58
RFFL-204ENST00000414419 ARHGAP42A6NI28 874 aa11.41□□□□□ -0.58
RFFL-204ENST00000414419 UPK3BL1B0FP48 263 aa11.41□□□□□ -0.58
RFFL-204ENST00000414419 RASA4BC9J798 803 aa11.41□□□□□ -0.58
RFFL-204ENST00000414419 UPK3BL2E5RIL1 263 aa11.41□□□□□ -0.58
RFFL-204ENST00000414419 MYO1FO00160 1098 aa11.41□□□□□ -0.58
RFFL-204ENST00000414419 RASA4O43374 803 aa11.41□□□□□ -0.58
RFFL-204ENST00000414419 LRCH4O75427 683 aa11.41□□□□□ -0.58
RFFL-204ENST00000414419 MAT2AP31153 395 aaKnown RBP11.41□□□□□ -0.58
RFFL-204ENST00000414419 PCK1P35558 622 aa11.41□□□□□ -0.58
RFFL-204ENST00000414419 NUDT1P36639 197 aa11.41□□□□□ -0.58
RFFL-204ENST00000414419 EIF4A3P38919 411 aaKnown RBP11.41□□□□□ -0.58
RFFL-204ENST00000414419 ZNF135P52742 658 aaPredicted RBP11.41□□□□□ -0.58
RFFL-204ENST00000414419 NDST2P52849 883 aa11.41□□□□□ -0.58
RFFL-204ENST00000414419 RAD51Q06609 339 aa11.41□□□□□ -0.58
RFFL-204ENST00000414419 ZNF252P-AS1Q0IIN9 211 aa11.41□□□□□ -0.58
RFFL-204ENST00000414419 SEMA3BQ13214 749 aa11.41□□□□□ -0.58
RFFL-204ENST00000414419 SUZ12Q15022 739 aaKnown RBP11.41□□□□□ -0.58
RFFL-204ENST00000414419 BOLA3Q53S33 107 aa11.41□□□□□ -0.58
RFFL-204ENST00000414419 N4BP2L1Q5TBK1 243 aaPredicted RBP11.41□□□□□ -0.58
RFFL-204ENST00000414419 AGBL4Q5VU57 503 aa11.41□□□□□ -0.58
RFFL-204ENST00000414419 FBXL19Q6PCT2 694 aa11.41□□□□□ -0.58
RFFL-204ENST00000414419 LEKR1Q6ZMV7 388 aa11.41□□□□□ -0.58
RFFL-204ENST00000414419 ERN2Q76MJ5 926 aaKnown RBP11.41□□□□□ -0.58
RFFL-204ENST00000414419 PLPP6Q8IY26 295 aa11.41□□□□□ -0.58
RFFL-204ENST00000414419 UMODL1-AS1Q8N2C9 162 aa11.41□□□□□ -0.58
RFFL-204ENST00000414419 ARFGAP1Q8N6T3 406 aa11.41□□□□□ -0.58
RFFL-204ENST00000414419 HMCESQ96FZ2 354 aa11.41□□□□□ -0.58
RFFL-204ENST00000414419 SERAC1Q96JX3 654 aa11.41□□□□□ -0.58
RFFL-204ENST00000414419 NUP85Q9BW27 656 aa11.41□□□□□ -0.58
RFFL-204ENST00000414419 TRIM7Q9C029 511 aa11.41□□□□□ -0.58
RFFL-204ENST00000414419 ZWILCHQ9H900 591 aa11.41□□□□□ -0.58
RFFL-204ENST00000414419 PREBQ9HCU5 417 aa11.41□□□□□ -0.58
RFFL-204ENST00000414419 ARHGAP20Q9P2F6 1191 aa11.41□□□□□ -0.58
RFFL-204ENST00000414419 ANAPC7Q9UJX3 599 aa11.41□□□□□ -0.58
RFFL-204ENST00000414419 WASF2Q9Y6W5 498 aa11.41□□□□□ -0.58
RFFL-204ENST00000414419 NCOR2Q9Y618 2525 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 SHROOM3Q8TF72 1996 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 KRIT1O00522 736 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 GIPC1O14908 333 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 AKR1B10O60218 316 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 RNGTTO60942 597 aaKnown RBP11.4□□□□□ -0.58
RFFL-204ENST00000414419 ZNF821O75541 412 aaPredicted RBP11.4□□□□□ -0.58
RFFL-204ENST00000414419 PCDH8O95206 1070 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 POP4O95707 220 aaKnown RBP11.4□□□□□ -0.58
RFFL-204ENST00000414419 CD160O95971 181 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 IGSF6O95976 241 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 GSRP00390 522 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 ITGB7P26010 798 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 CD38P28907 300 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 HNRNPH3P31942 346 aaKnown RBP11.4□□□□□ -0.58
RFFL-204ENST00000414419 ARL4AP40617 200 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 SSR1P43307 286 aaKnown RBP11.4□□□□□ -0.58
RFFL-204ENST00000414419 NEK3P51956 506 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 RHOAP61586 193 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 PPP2CBP62714 309 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 PPP2CAP67775 309 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 SERINC3Q13530 473 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 HNRNPDQ14103 355 aaKnown RBP11.4□□□□□ -0.58
RFFL-204ENST00000414419 STAT4Q14765 748 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 CA9Q16790 459 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 KIF19Q2TAC6 998 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 SETMARQ53H47 684 aaPredicted RBP11.4□□□□□ -0.58
RFFL-204ENST00000414419 INO80DQ53TQ3 878 aaPredicted RBP11.4□□□□□ -0.58
RFFL-204ENST00000414419 NEK5Q6P3R8 708 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 RFX8Q6ZV50 586 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 TRIM69Q86WT6 500 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 VSTM4Q8IW00 320 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 OR2AP1Q8NGE2 309 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 SETD7Q8WTS6 366 aaKnown RBP11.4□□□□□ -0.58
RFFL-204ENST00000414419 CTNNBL1Q8WYA6 563 aaPredicted RBP11.4□□□□□ -0.58
RFFL-204ENST00000414419 FAM131CQ96AQ9 280 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 ARRDC3Q96B67 414 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 LRIG1Q96JA1 1093 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 GDAP1L1Q96MZ0 367 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 SLC6A18Q96N87 628 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 PEBP4Q96S96 227 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 KCTD15Q96SI1 283 aaPredicted RBP11.4□□□□□ -0.58
RFFL-204ENST00000414419 HDAC8Q9BY41 377 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 NOL6Q9H6R4 1146 aaKnown RBP11.4□□□□□ -0.58
RFFL-204ENST00000414419 EBF2Q9HAK2 575 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 TM7SF3Q9NS93 570 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 CTTNBP2NLQ9P2B4 639 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 UBA2Q9UBT2 640 aaPredicted RBP11.4□□□□□ -0.58
RFFL-204ENST00000414419 DMTF1Q9Y222 760 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 SNX11Q9Y5W9 270 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 SLCO1B1Q9Y6L6 691 aa11.4□□□□□ -0.58
RFFL-204ENST00000414419 ANKRD36A6QL64 1941 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 TDRD6O60522 2096 aaKnown RBP11.39□□□□□ -0.59
RFFL-204ENST00000414419 H3BRJ5 948 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 VILLO15195 856 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 LATO43561 262 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 DFNA5O60443 496 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 MAGEC1O60732 1142 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 GJB3O75712 270 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 TMCC1O94876 653 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 CYP1A2P05177 515 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 H2AFZP0C0S5 128 aa11.39□□□□□ -0.59
RFFL-204ENST00000414419 ZNF883P0CG24 379 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms