RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 WDR11Q9BZH6 1224 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 TINAGL1Q9GZM7 467 aaPredicted RBP5.14□□□□□ -1.59
GABPB1-204ENST00000396464 SERINC1Q9NRX5 453 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 WSB2Q9NYS7 404 aaPredicted RBP5.14□□□□□ -1.59
GABPB1-204ENST00000396464 MPP6Q9NZW5 540 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 DNMT3BQ9UBC3 853 aaKnown RBP5.14□□□□□ -1.59
GABPB1-204ENST00000396464 CLIP2Q9UDT6 1046 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 FAM153AQ9UHL3 310 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 CDH22Q9UJ99 828 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 OSGIN1Q9UJX0 560 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 MKLN1Q9UL63 735 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 SUFUQ9UMX1 484 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 AGAP1Q9UPQ3 857 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 CHKBQ9Y259 395 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 TMED5Q9Y3A6 229 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 NFS1Q9Y697 457 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 CLCA3PQ9Y6N3 262 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 A0A0G2JPF8 293 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 LINC00854A0A1B0GVQ3 168 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 SMIM30A4D0T7 59 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 C16orf96A6NNT2 1141 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 HNRNPCL3B7ZW38 293 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 KLHL18O94889 574 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 SLCO2B1O94956 709 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 PENKP01210 267 aaPredicted RBP5.14□□□□□ -1.59
GABPB1-204ENST00000396464 LMNAP02545 664 aaKnown RBP5.14□□□□□ -1.59
GABPB1-204ENST00000396464 CFIP05156 583 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 HNRNPCL4P0DMR1 293 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 ERCC2P18074 760 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 HSPA1LP34931 641 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 MTIF2P46199 727 aaKnown RBP5.14□□□□□ -1.59
GABPB1-204ENST00000396464 ALDH1A3P47895 512 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 ZNF135P52742 658 aaPredicted RBP5.14□□□□□ -1.59
GABPB1-204ENST00000396464 CAPZA1P52907 286 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 TRA2BP62995 288 aaKnown RBP5.14□□□□□ -1.59
GABPB1-204ENST00000396464 RNASELQ05823 741 aaKnown RBP5.14□□□□□ -1.59
GABPB1-204ENST00000396464 RUNX1T1Q06455 604 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 TUBB3Q13509 450 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 PPP1R7Q15435 360 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 LETM2Q2VYF4 491 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 CCDC40Q4G0X9 1142 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 CES4AQ5XG92 561 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 KIAA0930Q6ICG6 404 aaPredicted RBP5.14□□□□□ -1.59
GABPB1-204ENST00000396464 MSANTD2Q6P1R3 559 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 SEM1Q6ZVN7 128 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 GAS2L3Q86XJ1 694 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 UNC5CLQ8IV45 518 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 ARHGAP12Q8IWW6 846 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 REXO1L1PQ8IX06 675 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 MINDY1Q8N5J2 469 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 STPG3Q8N7X2 389 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 PTGR2Q8N8N7 351 aaPredicted RBP5.14□□□□□ -1.59
GABPB1-204ENST00000396464 KDM1BQ8NB78 822 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 TNIP2Q8NFZ5 429 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 CCDC110Q8TBZ0 833 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 RAB7BQ96AH8 199 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 CFAP36Q96G28 342 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 MASTLQ96GX5 879 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 COG3Q96JB2 828 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 WWC2-AS2Q96NR7 200 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 INTS14Q96SY0 518 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 PAIP2Q9BPZ3 127 aaKnown RBP5.14□□□□□ -1.59
GABPB1-204ENST00000396464 MGME1Q9BQP7 344 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 SRSF8Q9BRL6 282 aaKnown RBP5.14□□□□□ -1.59
GABPB1-204ENST00000396464 SLC25A23Q9BV35 468 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 UTP14AQ9BVJ6 771 aaKnown RBP5.14□□□□□ -1.59
GABPB1-204ENST00000396464 MRPL1Q9BYD6 325 aaKnown RBP5.14□□□□□ -1.59
GABPB1-204ENST00000396464 OR10A5Q9H207 317 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 MMRN2Q9H8L6 949 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 SYNPO2LQ9H987 977 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 C17orf75Q9HAS0 396 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 TM9SF3Q9HD45 589 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 FBXO34Q9NWN3 711 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 NMRK1Q9NWW6 199 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 CYP39A1Q9NYL5 469 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 NCDNQ9UBB6 729 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 ARMCX3Q9UH62 379 aaPredicted RBP5.14□□□□□ -1.59
GABPB1-204ENST00000396464 NENFQ9UMX5 172 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 DRG1Q9Y295 367 aaKnown RBP5.14□□□□□ -1.59
GABPB1-204ENST00000396464 WDR37Q9Y2I8 494 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 CAB39Q9Y376 341 aaPredicted RBP5.14□□□□□ -1.59
GABPB1-204ENST00000396464 JRKLQ9Y4A0 524 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 ENTPD2Q9Y5L3 495 aa5.14□□□□□ -1.59
GABPB1-204ENST00000396464 TEX13CA0A0J9YWL9 993 aa5.13□□□□□ -1.59
GABPB1-204ENST00000396464 CDRT15L2A8MXV6 281 aa5.13□□□□□ -1.59
GABPB1-204ENST00000396464 LACTBL1A8MY62 500 aa5.13□□□□□ -1.59
GABPB1-204ENST00000396464 TEX22C9J3V5 150 aa5.13□□□□□ -1.59
GABPB1-204ENST00000396464 ADAMDEC1O15204 470 aa5.13□□□□□ -1.59
GABPB1-204ENST00000396464 NEMFO60524 1076 aa5.13□□□□□ -1.59
GABPB1-204ENST00000396464 DDHD2O94830 711 aa5.13□□□□□ -1.59
GABPB1-204ENST00000396464 KNG1P01042 644 aa5.13□□□□□ -1.59
GABPB1-204ENST00000396464 C1SP09871 688 aa5.13□□□□□ -1.59
GABPB1-204ENST00000396464 COX7A2P14406 83 aa5.13□□□□□ -1.59
GABPB1-204ENST00000396464 GDI1P31150 447 aa5.13□□□□□ -1.59
GABPB1-204ENST00000396464 CRHR1P34998 444 aa5.13□□□□□ -1.59
GABPB1-204ENST00000396464 ARCN1P48444 511 aaKnown RBP5.13□□□□□ -1.59
GABPB1-204ENST00000396464 PMS2P54278 862 aa5.13□□□□□ -1.59
GABPB1-204ENST00000396464 INHBEP58166 350 aa5.13□□□□□ -1.59
GABPB1-204ENST00000396464 FAM3BP58499 235 aaPredicted RBP5.13□□□□□ -1.59
GABPB1-204ENST00000396464 RAC3P60763 192 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms