RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 FBXO10Q9UK96 956 aa13.27□□□□□ -0.28
PTPRN2-202ENST00000389416 TCRBV9S1A1TA0A576 114 aa13.27□□□□□ -0.28
PTPRN2-202ENST00000389416 ADH1CP00326 375 aa13.27□□□□□ -0.28
PTPRN2-202ENST00000389416 CHRNA1P02708 482 aa13.27□□□□□ -0.28
PTPRN2-202ENST00000389416 GNA12Q03113 381 aa13.27□□□□□ -0.28
PTPRN2-202ENST00000389416 TRIP4Q15650 581 aaPredicted RBP13.27□□□□□ -0.28
PTPRN2-202ENST00000389416 MED8Q96G25 268 aa13.27□□□□□ -0.28
PTPRN2-202ENST00000389416 PPP1R16AQ96I34 528 aa13.27□□□□□ -0.28
PTPRN2-202ENST00000389416 XYLT2Q9H1B5 865 aa13.27□□□□□ -0.28
PTPRN2-202ENST00000389416 TBC1D14Q9P2M4 693 aa13.27□□□□□ -0.28
PTPRN2-202ENST00000389416 YIPF1Q9Y548 306 aa13.27□□□□□ -0.28
PTPRN2-202ENST00000389416 ZFP37Q9Y6Q3 630 aaPredicted RBP13.27□□□□□ -0.28
PTPRN2-202ENST00000389416 ALOX15BO15296 676 aa13.27□□□□□ -0.29
PTPRN2-202ENST00000389416 H2AFYO75367 372 aaKnown RBP13.27□□□□□ -0.29
PTPRN2-202ENST00000389416 GPR32O75388 356 aa13.27□□□□□ -0.29
PTPRN2-202ENST00000389416 IL1R2P27930 398 aa13.27□□□□□ -0.29
PTPRN2-202ENST00000389416 GPR15P49685 360 aa13.27□□□□□ -0.29
PTPRN2-202ENST00000389416 RAP1GDS1P52306 607 aa13.27□□□□□ -0.29
PTPRN2-202ENST00000389416 ACTN3Q08043 901 aaPredicted RBP13.27□□□□□ -0.29
PTPRN2-202ENST00000389416 PTP4A2Q12974 167 aa13.27□□□□□ -0.29
PTPRN2-202ENST00000389416 TMEM259Q4ZIN3 620 aa13.27□□□□□ -0.29
PTPRN2-202ENST00000389416 ACBD5Q5T8D3 534 aaPredicted RBP13.27□□□□□ -0.29
PTPRN2-202ENST00000389416 PANX3Q96QZ0 392 aa13.27□□□□□ -0.29
PTPRN2-202ENST00000389416 ELOVL6Q9H5J4 265 aa13.27□□□□□ -0.29
PTPRN2-202ENST00000389416 PTPRHQ9HD43 1115 aa13.27□□□□□ -0.29
PTPRN2-202ENST00000389416 ZNF446Q9NWS9 450 aa13.27□□□□□ -0.29
PTPRN2-202ENST00000389416 NOP53Q9NZM5 478 aaKnown RBP13.27□□□□□ -0.29
PTPRN2-202ENST00000389416 EVLQ9UI08 416 aaPredicted RBP13.27□□□□□ -0.29
PTPRN2-202ENST00000389416 GNEQ9Y223 722 aaKnown RBP13.27□□□□□ -0.29
PTPRN2-202ENST00000389416 RWDD3Q9Y3V2 267 aa13.27□□□□□ -0.29
PTPRN2-202ENST00000389416 A0A1B0GVM2 712 aa13.27□□□□□ -0.29
PTPRN2-202ENST00000389416 TCAF2A6NFQ2 919 aa13.27□□□□□ -0.29
PTPRN2-202ENST00000389416 LMNAP02545 664 aaKnown RBP13.27□□□□□ -0.29
PTPRN2-202ENST00000389416 UGT2B4P06133 528 aa13.27□□□□□ -0.29
PTPRN2-202ENST00000389416 LPOP22079 712 aaPredicted RBP13.27□□□□□ -0.29
PTPRN2-202ENST00000389416 LMO3Q8TAP4 145 aa13.27□□□□□ -0.29
PTPRN2-202ENST00000389416 SLC35F5Q8WV83 523 aa13.27□□□□□ -0.29
PTPRN2-202ENST00000389416 NSL1Q96IY1 281 aa13.27□□□□□ -0.29
PTPRN2-202ENST00000389416 PIGVQ9NUD9 493 aa13.27□□□□□ -0.29
PTPRN2-202ENST00000389416 ZNF510Q9Y2H8 683 aa13.27□□□□□ -0.29
PTPRN2-202ENST00000389416 TDRKHQ9Y2W6 561 aaKnown RBP13.27□□□□□ -0.29
PTPRN2-202ENST00000389416 IRAK2O43187 625 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 CCDC166P0CW27 439 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 HOXA11P31270 313 aaPredicted RBP13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 HADHBP55084 474 aaKnown RBP13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 RPS24P62847 133 aaKnown RBP13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 AP2B1P63010 937 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 GPM6BQ13491 265 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 DNAL1Q4LDG9 190 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 ANKS6Q68DC2 871 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 SLC41A1Q8IVJ1 513 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 SLC9A7Q96T83 725 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 IL1RAPL1Q9NZN1 696 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 PCDHA11Q9Y5I1 949 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 STBD1O95210 358 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 STAU1O95793 577 aaKnown RBP13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 COL6A1P12109 1028 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 NAGLUP54802 743 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 DSC2Q02487 901 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 PARP15Q460N3 678 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 MCOLN3Q8TDD5 553 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 CPT1BQ92523 772 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 RPL10LQ96L21 214 aaKnown RBP13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 PAAF1Q9BRP4 392 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 ACSS3Q9H6R3 686 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 HBS1LQ9Y450 684 aaKnown RBP13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 RAD54BQ9Y620 910 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 MYH11P35749 1972 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 C1QTNF3-AMACRE9PGA6 284 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 PIRO00625 290 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 MT-CYBP00156 380 aaPredicted RBP13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 SERPINE1P05121 402 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 RPA3P35244 121 aaPredicted RBP13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 NUDT2P50583 147 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 IL2P60568 153 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 NR6A1Q15406 480 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 TXNDC8Q6A555 127 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 POTEHQ6S545 545 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 SLC22A9Q8IVM8 553 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 SMG8Q8ND04 991 aaKnown RBP13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 VPS37AQ8NEZ2 397 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 ALG9Q9H6U8 611 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 CCSER2Q9H7U1 834 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 PCDHGC4Q9Y5F7 938 aa13.26□□□□□ -0.29
PTPRN2-202ENST00000389416 MAP2K7O14733 419 aa13.25□□□□□ -0.29
PTPRN2-202ENST00000389416 RAD51BO15315 384 aa13.25□□□□□ -0.29
PTPRN2-202ENST00000389416 FGF1P05230 155 aa13.25□□□□□ -0.29
PTPRN2-202ENST00000389416 HLA-DPA1P20036 260 aa13.25□□□□□ -0.29
PTPRN2-202ENST00000389416 TM4SF4P48230 202 aa13.25□□□□□ -0.29
PTPRN2-202ENST00000389416 CCNG1P51959 295 aa13.25□□□□□ -0.29
PTPRN2-202ENST00000389416 THOP1P52888 689 aa13.25□□□□□ -0.29
PTPRN2-202ENST00000389416 CCDC153Q494R4 210 aa13.25□□□□□ -0.29
PTPRN2-202ENST00000389416 RARS2Q5T160 578 aaKnown RBP13.25□□□□□ -0.29
PTPRN2-202ENST00000389416 RASIP1Q5U651 963 aa13.25□□□□□ -0.29
PTPRN2-202ENST00000389416 MTDHQ86UE4 582 aaKnown RBP13.25□□□□□ -0.29
PTPRN2-202ENST00000389416 ZC3H3Q8IXZ2 948 aaKnown RBP13.25□□□□□ -0.29
PTPRN2-202ENST00000389416 CXorf40AQ8TE69 158 aa13.25□□□□□ -0.29
PTPRN2-202ENST00000389416 PSMG2Q969U7 264 aa13.25□□□□□ -0.29
PTPRN2-202ENST00000389416 SERAC1Q96JX3 654 aa13.25□□□□□ -0.29
PTPRN2-202ENST00000389416 SMOQ99835 787 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms