RNA–Protein interactions for RNA: ENST00000363192.1

RNU4-58P-201, Transcript of RNA, U4 small nuclear 58, pseudogene, humanhuman

BASIC

Gene RNU4-58P, Length 141 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-58P-201ENST00000363192 MECRQ9BV79 373 aa0.78□□□□□ -2.28
RNU4-58P-201ENST00000363192 APOL5Q9BWW9 433 aa0.78□□□□□ -2.28
RNU4-58P-201ENST00000363192 HDHD5Q9BXW7 423 aa0.78□□□□□ -2.28
RNU4-58P-201ENST00000363192 NPFFR1Q9GZQ6 430 aa0.78□□□□□ -2.28
RNU4-58P-201ENST00000363192 NUP62CLQ9H1M0 184 aa0.78□□□□□ -2.28
RNU4-58P-201ENST00000363192 LRRC4Q9HBW1 653 aa0.78□□□□□ -2.28
RNU4-58P-201ENST00000363192 FBRSL1Q9HCM7 1045 aaKnown RBP0.78□□□□□ -2.28
RNU4-58P-201ENST00000363192 ZNF334Q9HCZ1 680 aaPredicted RBP0.78□□□□□ -2.28
RNU4-58P-201ENST00000363192 HELLSQ9NRZ9 838 aa0.78□□□□□ -2.28
RNU4-58P-201ENST00000363192 CDH22Q9UJ99 828 aa0.78□□□□□ -2.28
RNU4-58P-201ENST00000363192 CNTN6Q9UQ52 1028 aa0.78□□□□□ -2.28
RNU4-58P-201ENST00000363192 MAN2B2Q9Y2E5 1009 aa0.78□□□□□ -2.28
RNU4-58P-201ENST00000363192 SNX13Q9Y5W8 968 aa0.78□□□□□ -2.28
RNU4-58P-201ENST00000363192 FAM90A18PA6NE21 464 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 FAM90A16PA6NEW6 464 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 MBD3L5A6NJ08 208 aaPredicted RBP0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 NPIPB13A6NJU9 1138 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 FAM90A9PA6NNJ1 464 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 NPIPB5A8MRT5 1133 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 FAM90A5PA8MXJ8 464 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 VSTM5A8MXK1 200 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 KDM4EB2RXH2 506 aaPredicted RBP0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 KIF28PB7ZC32 967 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 NPIPB4C9JG80 1138 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 APOL1O14791 398 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 KPNA5O15131 536 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 RNMTO43148 476 aaKnown RBP0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 FGF17O60258 216 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 CLDN14O95500 239 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 GLP2RO95838 553 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 CH25HO95992 272 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 MMP3P08254 477 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 FAM90A15PP0C7V4 464 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 FAM90A14PP0C7W9 464 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 RNF224P0DH78 156 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 FCGR2AP12318 317 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 CKMT1AP12532 417 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 SRCP12931 536 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 SLC5A1P13866 664 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 IDEP14735 1019 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 NR1D1P20393 614 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 ZNF10P21506 573 aaPredicted RBP0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 PRIM2P49643 509 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 PEX5P50542 639 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 CLCN3P51790 818 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 CLCNKBP51801 687 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 NLRP5P59047 1200 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 PMP22Q01453 160 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 CYP4A11Q02928 519 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 FAM27E3Q08E93 113 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 PPIGQ13427 754 aaKnown RBP eCLIP0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 SLC35G1Q2M3R5 365 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 TRIM60Q495X7 471 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 ACCSLQ4AC99 568 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 SPINK14Q6IE38 97 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 TYW3Q6IPR3 259 aaKnown RBP0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 ARHGAP11AQ6P4F7 1023 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 CCDC129Q6ZRS4 1044 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 BEND5Q7L4P6 421 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 NOTCH2NLQ7Z3S9 236 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 DSG4Q86SJ6 1040 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 AADATQ8N5Z0 425 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 ENDOVQ8N8Q3 282 aaKnown RBP0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 CCDC150Q8NCX0 1101 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 STT3BQ8TCJ2 826 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 FAR1Q8WVX9 515 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 LGALS12Q96DT0 336 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 REXO5Q96IC2 774 aaKnown RBP0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 ZNF414Q96IQ9 312 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 C17orf77Q96MU5 243 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 ZNF599Q96NL3 588 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 F2RL3Q96RI0 385 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 ATOH8Q96SQ7 321 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 DDX24Q9GZR7 859 aaKnown RBP eCLIP0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 LHPPQ9H008 270 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 CCDC134Q9H6E4 229 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 EPS8L2Q9H6S3 715 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 NECTIN3Q9NQS3 549 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 DDX21Q9NR30 783 aaKnown RBP eCLIP0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 KLHL1Q9NR64 748 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 TMEM51Q9NW97 253 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 SMARCAL1Q9NZC9 954 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 ZNF224Q9NZL3 707 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 NOP58Q9Y2X3 529 aaKnown RBP0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 MORC2Q9Y6X9 1032 aaPredicted RBP0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 CGNL1Q0VF96 1302 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 FRMPD2Q68DX3 1309 aaPredicted RBP0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 PCNX3Q9H6A9 2034 aa0.77□□□□□ -2.29
RNU4-58P-201ENST00000363192 TBC1D3DA0A087WVF3 549 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 TBC1D3IA0A087WXS9 549 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 TBC1D3EA0A087X179 549 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 TBC1D3KA0A087X1G2 549 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 TNFSF12-TNFSF13A0A0A6YY99 330 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 A0A1W2PS18 150 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 TBC1D3BA6NDS4 549 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 TBC1D3FA6NER0 549 aaPredicted RBP0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 AGAP5A6NIR3 686 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 TBC1D3LB9A6J9 549 aa0.76□□□□□ -2.29
RNU4-58P-201ENST00000363192 GRM8O00222 908 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms