RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 STMN4Q9H169 189 aaPredicted RBP14.95□□□□□ -0.02
CXCL12-201ENST00000343575 EPB41L4BQ9H329 900 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 KIF9Q9HAQ2 790 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 SPHK2Q9NRA0 654 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 DNAJC17Q9NVM6 304 aaKnown RBP14.95□□□□□ -0.02
CXCL12-201ENST00000343575 KLHL8Q9P2G9 620 aaPredicted RBP14.95□□□□□ -0.02
CXCL12-201ENST00000343575 TRHDEQ9UKU6 1024 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 CDH7Q9ULB5 785 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 CCT8L1PA6NM43 557 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 H0Y626 953 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 KDELR3O43731 214 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 ZMPSTE24O75844 475 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 HLA-DQB2P05538 268 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 NFKB1P19838 968 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 IGFBP4P22692 258 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 GRIA1P42261 906 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 TNK2Q07912 1038 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 DHX9Q08211 1270 aaKnown RBP14.95□□□□□ -0.02
CXCL12-201ENST00000343575 KRT71Q3SY84 523 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 MSS51Q4VC12 460 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 LY6G5CQ5SRR4 150 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 FNBP1LQ5T0N5 605 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 ASTLQ6HA08 431 aaPredicted RBP14.95□□□□□ -0.02
CXCL12-201ENST00000343575 TIGD7Q6NT04 549 aaPredicted RBP14.95□□□□□ -0.02
CXCL12-201ENST00000343575 OTOP3Q7RTS5 596 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 PCGF5Q86SE9 256 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 MFN1Q8IWA4 741 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 KLHDC8BQ8IXV7 354 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 AGGF1Q8N302 714 aaeCLIP14.95□□□□□ -0.02
CXCL12-201ENST00000343575 PGBD5Q8N414 524 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 IRF7Q92985 503 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 PGM2Q96G03 612 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 RSRC1Q96IZ7 334 aaKnown RBP14.95□□□□□ -0.02
CXCL12-201ENST00000343575 XPO6Q96QU8 1125 aaKnown RBP14.95□□□□□ -0.02
CXCL12-201ENST00000343575 WDR83Q9BRX9 315 aaKnown RBP14.95□□□□□ -0.02
CXCL12-201ENST00000343575 MLPHQ9BV36 600 aaPredicted RBP14.95□□□□□ -0.02
CXCL12-201ENST00000343575 NSRP1Q9H0G5 558 aaKnown RBP14.95□□□□□ -0.02
CXCL12-201ENST00000343575 GBA3Q9H227 469 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 RBM22Q9NW64 420 aaKnown RBP eCLIP14.95□□□□□ -0.02
CXCL12-201ENST00000343575 TBC1D14Q9P2M4 693 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 INTS6Q9UL03 887 aaKnown RBP14.95□□□□□ -0.02
CXCL12-201ENST00000343575 NOVA2Q9UNW9 492 aaKnown RBP14.95□□□□□ -0.02
CXCL12-201ENST00000343575 DENND4AQ7Z401 1863 aa14.94□□□□□ -0.02
CXCL12-201ENST00000343575 MUSKO15146 869 aa14.94□□□□□ -0.02
CXCL12-201ENST00000343575 SNAP91O60641 907 aa14.94□□□□□ -0.02
CXCL12-201ENST00000343575 ZNF189O75820 626 aaPredicted RBP14.94□□□□□ -0.02
CXCL12-201ENST00000343575 STK10O94804 968 aaKnown RBP14.94□□□□□ -0.02
CXCL12-201ENST00000343575 APRTP07741 180 aa14.94□□□□□ -0.02
CXCL12-201ENST00000343575 CSKP41240 450 aa14.94□□□□□ -0.02
CXCL12-201ENST00000343575 ARF5P84085 180 aa14.94□□□□□ -0.02
CXCL12-201ENST00000343575 MTM1Q13496 603 aa14.94□□□□□ -0.02
CXCL12-201ENST00000343575 KCTD11Q693B1 232 aa14.94□□□□□ -0.02
CXCL12-201ENST00000343575 TRIM68Q6AZZ1 485 aa14.94□□□□□ -0.02
CXCL12-201ENST00000343575 TANGO2Q6ICL3 276 aa14.94□□□□□ -0.02
CXCL12-201ENST00000343575 ZNF783Q6ZMS7 281 aa14.94□□□□□ -0.02
CXCL12-201ENST00000343575 APCDD1Q8J025 514 aa14.94□□□□□ -0.02
CXCL12-201ENST00000343575 SMRP1Q8NCR6 262 aa14.94□□□□□ -0.02
CXCL12-201ENST00000343575 FIBINQ8TAL6 211 aa14.94□□□□□ -0.02
CXCL12-201ENST00000343575 OTUB2Q96DC9 234 aa14.94□□□□□ -0.02
CXCL12-201ENST00000343575 PABPC5Q96DU9 382 aaKnown RBP14.94□□□□□ -0.02
CXCL12-201ENST00000343575 OXNAD1Q96HP4 312 aaPredicted RBP14.94□□□□□ -0.02
CXCL12-201ENST00000343575 FERMT1Q9BQL6 677 aa14.94□□□□□ -0.02
CXCL12-201ENST00000343575 SPON2Q9BUD6 331 aa14.94□□□□□ -0.02
CXCL12-201ENST00000343575 SEMA4AQ9H3S1 761 aa14.94□□□□□ -0.02
CXCL12-201ENST00000343575 POMKQ9H5K3 350 aa14.94□□□□□ -0.02
CXCL12-201ENST00000343575 CCDC134Q9H6E4 229 aa14.94□□□□□ -0.02
CXCL12-201ENST00000343575 HAUS2Q9NVX0 235 aa14.94□□□□□ -0.02
CXCL12-201ENST00000343575 BCCIPQ9P287 314 aaKnown RBP eCLIP14.94□□□□□ -0.02
CXCL12-201ENST00000343575 ATP8A1Q9Y2Q0 1164 aa14.94□□□□□ -0.02
CXCL12-201ENST00000343575 OTOL1A6NHN0 477 aaPredicted RBP14.93□□□□□ -0.02
CXCL12-201ENST00000343575 BANF1O75531 89 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 NUDT17P0C025 328 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 HLA-FP30511 346 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 CD70P32970 193 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 FDFT1P37268 417 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 MAGOHP61326 146 aaKnown RBP14.93□□□□□ -0.02
CXCL12-201ENST00000343575 LMAN2Q12907 356 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 OLIG2Q13516 323 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 CDH18Q13634 790 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 FASTKD3Q14CZ7 662 aaKnown RBP14.93□□□□□ -0.02
CXCL12-201ENST00000343575 EML3Q32P44 896 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 IL31Q6EBC2 164 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 EP400NLQ6ZTU2 488 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 CAND1Q86VP6 1230 aaKnown RBP14.93□□□□□ -0.02
CXCL12-201ENST00000343575 ZNF354CQ86Y25 554 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 PDCD7Q8N8D1 485 aaKnown RBP14.93□□□□□ -0.02
CXCL12-201ENST00000343575 KIAA1958Q8N8K9 716 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 OSCP1Q8WVF1 389 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 PLA2G2FQ9BZM2 168 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 SP110Q9HB58 689 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 ATP13A1Q9HD20 1204 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 MTRF1LQ9UGC7 380 aaKnown RBP14.93□□□□□ -0.02
CXCL12-201ENST00000343575 KIF26AQ9ULI4 1882 aaPredicted RBP14.93□□□□□ -0.02
CXCL12-201ENST00000343575 PRUNE2Q8WUY3 3088 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 TYW5A2RUC4 315 aaKnown RBP14.93□□□□□ -0.02
CXCL12-201ENST00000343575 HEPACAM2A8MVW5 462 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 E7ESA3 106 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 AVILO75366 819 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 GJB3O75712 270 aa14.93□□□□□ -0.02
CXCL12-201ENST00000343575 TPSB2P20231 275 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms