RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 TDRPQ86YL5 185 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 MYLPFQ96A32 169 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 PTCD3Q96EY7 689 aaKnown RBP17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 SEMA3CQ99985 751 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 STK39Q9UEW8 545 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 PCDHB12Q9Y5F1 795 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 RASSF9O75901 435 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 SERPINA4P29622 427 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 MAPK8P45983 427 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 RXRGP48443 463 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 SLC26A9Q7LBE3 791 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 SYTL1Q8IYJ3 562 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 ULK2Q8IYT8 1036 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 TNS4Q8IZW8 715 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 SVOPQ8N4V2 548 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 SPPL2AQ8TCT8 520 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 SNRNP27Q8WVK2 155 aaKnown RBP17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 PDGFDQ9GZP0 370 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 SPAG4Q9NPE6 437 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 SEMA4BQ9NPR2 832 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 COL20A1Q9P218 1284 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 MAFBQ9Y5Q3 323 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 KNDC1Q76NI1 1749 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 KRT87PA6NCN2 255 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 TRIM38O00635 465 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 STAU1O95793 577 aaKnown RBP17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 ANXA6P08133 673 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 ANPEPP15144 967 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 PIK3R1P27986 724 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 PPP2R1BP30154 601 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 CRHR1P34998 444 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 INHBEP58166 350 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 UBE3AQ05086 875 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 PLD1Q13393 1074 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 C9orf57Q5W0N0 161 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 RAP1GAP2Q684P5 730 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 ARMC6Q6NXE6 501 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 FBXW8Q8N3Y1 598 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 ZNF557Q8N988 423 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 FAXDC2Q96IV6 333 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 APOL4Q9BPW4 351 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 MRPL45Q9BRJ2 306 aaKnown RBP17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 DOLKQ9UPQ8 538 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 MTF2Q9Y483 593 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 MAP3K13O43283 966 aa17.27■□□□□ 0.36
TRAPPC11-201ENST00000334690 GSNP06396 782 aa17.27■□□□□ 0.36
TRAPPC11-201ENST00000334690 PTGIRP43119 386 aa17.27■□□□□ 0.36
TRAPPC11-201ENST00000334690 STARD3Q14849 445 aa17.27■□□□□ 0.36
TRAPPC11-201ENST00000334690 DUSP28Q4G0W2 176 aa17.27■□□□□ 0.36
TRAPPC11-201ENST00000334690 CCDC92Q53HC0 331 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC11-201ENST00000334690 ADGRD1Q6QNK2 874 aa17.27■□□□□ 0.36
TRAPPC11-201ENST00000334690 NECAB2Q7Z6G3 386 aa17.27■□□□□ 0.36
TRAPPC11-201ENST00000334690 CLVS1Q8IUQ0 354 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC11-201ENST00000334690 C1orf127Q8N9H9 656 aa17.27■□□□□ 0.36
TRAPPC11-201ENST00000334690 PTPRHQ9HD43 1115 aa17.27■□□□□ 0.36
TRAPPC11-201ENST00000334690 SSU72Q9NP77 194 aaKnown RBP17.27■□□□□ 0.36
TRAPPC11-201ENST00000334690 TPRKBQ9Y3C4 175 aa17.27■□□□□ 0.36
TRAPPC11-201ENST00000334690 NR2E1Q9Y466 385 aa17.27■□□□□ 0.36
TRAPPC11-201ENST00000334690 MDM4O15151 490 aa17.27■□□□□ 0.36
TRAPPC11-201ENST00000334690 ZBTB14O43829 449 aa17.27■□□□□ 0.36
TRAPPC11-201ENST00000334690 C2P06681 752 aa17.27■□□□□ 0.36
TRAPPC11-201ENST00000334690 ACSM2AQ08AH3 577 aa17.27■□□□□ 0.36
TRAPPC11-201ENST00000334690 SFSWAPQ12872 951 aaKnown RBP17.27■□□□□ 0.36
TRAPPC11-201ENST00000334690 BNIP1Q12981 228 aa17.27■□□□□ 0.36
TRAPPC11-201ENST00000334690 RNASEH2BQ5TBB1 312 aaKnown RBP17.27■□□□□ 0.36
TRAPPC11-201ENST00000334690 ACSM2BQ68CK6 577 aa17.27■□□□□ 0.36
TRAPPC11-201ENST00000334690 ERAP2Q6P179 960 aa17.27■□□□□ 0.36
TRAPPC11-201ENST00000334690 VPS45Q9NRW7 570 aa17.27■□□□□ 0.36
TRAPPC11-201ENST00000334690 RHBDL2Q9NX52 303 aa17.27■□□□□ 0.36
TRAPPC11-201ENST00000334690 C6orf203Q9P0P8 240 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC11-201ENST00000334690 SPEF2Q9C093 1822 aa17.27■□□□□ 0.36
TRAPPC11-201ENST00000334690 TGDSO95455 350 aa17.27■□□□□ 0.35
TRAPPC11-201ENST00000334690 PBLDP30039 288 aaPredicted RBP17.27■□□□□ 0.35
TRAPPC11-201ENST00000334690 MAP2K5Q13163 448 aa17.27■□□□□ 0.35
TRAPPC11-201ENST00000334690 NCF4Q15080 339 aa17.27■□□□□ 0.35
TRAPPC11-201ENST00000334690 SLC1A5Q15758 541 aa17.27■□□□□ 0.35
TRAPPC11-201ENST00000334690 CYP1B1Q16678 543 aa17.27■□□□□ 0.35
TRAPPC11-201ENST00000334690 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.27■□□□□ 0.35
TRAPPC11-201ENST00000334690 CLEC4DQ8WXI8 215 aa17.27■□□□□ 0.35
TRAPPC11-201ENST00000334690 CEP44Q9C0F1 390 aa17.27■□□□□ 0.35
TRAPPC11-201ENST00000334690 ARL15Q9NXU5 204 aa17.27■□□□□ 0.35
TRAPPC11-201ENST00000334690 LEF1Q9UJU2 399 aaPredicted RBP17.27■□□□□ 0.35
TRAPPC11-201ENST00000334690 PADI4Q9UM07 663 aa17.27■□□□□ 0.35
TRAPPC11-201ENST00000334690 MED1Q15648 1581 aaPredicted RBP17.27■□□□□ 0.35
TRAPPC11-201ENST00000334690 SMIM35A0A1B0GVV1 85 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 CD3EAPO15446 510 aaKnown RBP17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 ATG7O95352 703 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 DARSP14868 501 aaKnown RBP17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 CHN2P52757 468 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 C1DQ13901 141 aaKnown RBP17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 HECTD3Q5T447 861 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 NAIF1Q69YI7 327 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 GPR142Q7Z601 462 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 C10orf107Q8IVU9 208 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 MLPHQ9BV36 600 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 MECRQ9BV79 373 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 B3GNT5Q9BYG0 378 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 SFMBT1Q9UHJ3 866 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 DYTNA2CJ06 578 aa17.26■□□□□ 0.35
TRAPPC11-201ENST00000334690 IFRD1O00458 451 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms