RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 PLEKHA1Q9HB21 404 aa16.58■□□□□ 0.24
PTCH1-201ENST00000331920 PLGRKTQ9HBL7 147 aa16.58■□□□□ 0.24
PTCH1-201ENST00000331920 NMRAL1Q9HBL8 299 aa16.58■□□□□ 0.24
PTCH1-201ENST00000331920 SSU72P8A0A1W2PR75 194 aa16.58■□□□□ 0.24
PTCH1-201ENST00000331920 GRK5P34947 590 aa16.58■□□□□ 0.24
PTCH1-201ENST00000331920 TBX2Q13207 712 aaPredicted RBP16.58■□□□□ 0.24
PTCH1-201ENST00000331920 LMAN2LQ9H0V9 348 aa16.58■□□□□ 0.24
PTCH1-201ENST00000331920 G3V2T6 193 aa16.58■□□□□ 0.24
PTCH1-201ENST00000331920 RPA3P35244 121 aaPredicted RBP16.58■□□□□ 0.24
PTCH1-201ENST00000331920 JAZF1Q86VZ6 243 aa16.58■□□□□ 0.24
PTCH1-201ENST00000331920 ELMO3Q96BJ8 720 aa16.58■□□□□ 0.24
PTCH1-201ENST00000331920 C2orf71A6NGG8 1288 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 FRG1Q14331 258 aaKnown RBP16.57■□□□□ 0.24
PTCH1-201ENST00000331920 PDIA5Q14554 519 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 DENND5AQ6IQ26 1287 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 MINDY2Q8NBR6 621 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 DENND6BQ8NEG7 585 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 EURLQ9NYK6 297 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 GCC2Q8IWJ2 1684 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 CES1P23141 567 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 GNALP38405 381 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 TBX4P57082 545 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 ATP13A4Q4VNC1 1196 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 OGFRL1Q5TC84 451 aaPredicted RBP16.57■□□□□ 0.24
PTCH1-201ENST00000331920 GPR107Q5VW38 600 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 SLC41A1Q8IVJ1 513 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 CXorf40AQ8TE69 158 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 ANKS1AQ92625 1134 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 CELF1Q92879 486 aaKnown RBP16.57■□□□□ 0.24
PTCH1-201ENST00000331920 FERD3LQ96RJ6 166 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 NUP50Q9UKX7 468 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 ASXL2Q76L83 1435 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 SCAMP3O14828 347 aaKnown RBP16.57■□□□□ 0.24
PTCH1-201ENST00000331920 METTL18O95568 372 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 CRABP2P29373 138 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 KDM7AQ6ZMT4 941 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 ENGASEQ8NFI3 743 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 OR4A15Q8NGL6 344 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 C11orf24Q96F05 449 aaPredicted RBP16.57■□□□□ 0.24
PTCH1-201ENST00000331920 CEP295NLQ96MC4 621 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 CHIAQ9BZP6 476 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 IKZF2Q9UKS7 526 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 ABCA5Q8WWZ7 1642 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 A0A1B0GTH6 734 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 IGSF6O95976 241 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 FDX1P10109 184 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 SLC7A2P52569 658 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 ZFP1Q6P2D0 407 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 USP45Q70EL2 814 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 CCNJLQ8IV13 435 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 CXorf40BQ96DE9 158 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 CDK5RAP1Q96SZ6 601 aaKnown RBP16.57■□□□□ 0.24
PTCH1-201ENST00000331920 ABCG4Q9H172 646 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 ATP13A1Q9HD20 1204 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 TRIM38O00635 465 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 NCAM2O15394 837 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 ME2P23368 584 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 NOS2P35228 1153 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 RENBPP51606 427 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 ACSM2AQ08AH3 577 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 ATP13A5Q4VNC0 1218 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 ACSM2BQ68CK6 577 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 SLC26A11Q86WA9 606 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 OR8H3Q8N146 312 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 TNFAIP8L1Q8WVP5 186 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 OXNAD1Q96HP4 312 aaPredicted RBP16.57■□□□□ 0.24
PTCH1-201ENST00000331920 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.57■□□□□ 0.24
PTCH1-201ENST00000331920 PCDH1Q08174 1060 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 SAMD4BQ5PRF9 694 aaKnown RBP16.57■□□□□ 0.24
PTCH1-201ENST00000331920 STARD8Q92502 1023 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 TPK1Q9H3S4 243 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 HACL1Q9UJ83 578 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 INSRP06213 1382 aa16.57■□□□□ 0.24
PTCH1-201ENST00000331920 FAM205CA6NFA0 338 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 VAPBO95292 243 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 MUTP22033 750 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 PTGES3Q15185 160 aaKnown RBP16.56■□□□□ 0.24
PTCH1-201ENST00000331920 CARTPTQ16568 116 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 RAET1GQ6H3X3 334 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 FRRS1Q6ZNA5 592 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 GPRC5CQ9NQ84 441 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 DDX43Q9NXZ2 648 aaKnown RBP16.56■□□□□ 0.24
PTCH1-201ENST00000331920 FSHRP23945 695 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 KLHDC7AQ5VTJ3 777 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 PCNX4Q63HM2 1172 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 CNSTQ6PJW8 725 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 LGI2Q8N0V4 545 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 PIK3R3Q92569 461 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 ZSWIM1Q9BR11 485 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 BPIFA1Q9NP55 256 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 UBQLN1Q9UMX0 589 aaKnown RBP16.56■□□□□ 0.24
PTCH1-201ENST00000331920 CCDC163A0A0D9SF12 145 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 TSPAN8P19075 237 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 MGAT5Q09328 741 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 HSPA14Q0VDF9 509 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 TBC1D30Q9Y2I9 924 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 RPL19P84098 196 aaKnown RBP16.56■□□□□ 0.24
PTCH1-201ENST00000331920 PFKPQ01813 784 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 SLC15A2Q16348 729 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 KCTD8Q6ZWB6 473 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms