RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 LEFTY1O75610 366 aa18.09■□□□□ 0.49
HDDC3-201ENST00000330334 ITGAVP06756 1048 aa18.09■□□□□ 0.49
HDDC3-201ENST00000330334 ITGB7P26010 798 aa18.09■□□□□ 0.49
HDDC3-201ENST00000330334 ZNF284Q2VY69 593 aa18.09■□□□□ 0.49
HDDC3-201ENST00000330334 ANO6Q4KMQ2 910 aa18.09■□□□□ 0.49
HDDC3-201ENST00000330334 PRAMEF14Q5SWL7 426 aa18.09■□□□□ 0.49
HDDC3-201ENST00000330334 DNAJC24Q6P3W2 148 aa18.09■□□□□ 0.49
HDDC3-201ENST00000330334 ZSCAN30Q86W11 494 aa18.09■□□□□ 0.49
HDDC3-201ENST00000330334 SPATS2Q86XZ4 545 aaKnown RBP18.09■□□□□ 0.49
HDDC3-201ENST00000330334 FAM174AQ8TBP5 190 aa18.09■□□□□ 0.49
HDDC3-201ENST00000330334 CNPY3Q9BT09 278 aa18.09■□□□□ 0.49
HDDC3-201ENST00000330334 NDFIP2Q9NV92 336 aa18.09■□□□□ 0.49
HDDC3-201ENST00000330334 PCDHGA1Q9Y5H4 931 aa18.09■□□□□ 0.49
HDDC3-201ENST00000330334 A0A1W2PQU0 124 aa18.08■□□□□ 0.48
HDDC3-201ENST00000330334 ZSCAN5CA6NGD5 496 aaPredicted RBP18.08■□□□□ 0.48
HDDC3-201ENST00000330334 RNF103O00237 685 aa18.08■□□□□ 0.48
HDDC3-201ENST00000330334 AP1G1O43747 822 aa18.08■□□□□ 0.48
HDDC3-201ENST00000330334 RAMP2O60895 175 aa18.08■□□□□ 0.48
HDDC3-201ENST00000330334 C1SP09871 688 aa18.08■□□□□ 0.48
HDDC3-201ENST00000330334 CDK4P11802 303 aa18.08■□□□□ 0.48
HDDC3-201ENST00000330334 EPHA8P29322 1005 aaPredicted RBP18.08■□□□□ 0.48
HDDC3-201ENST00000330334 ACVRL1P37023 503 aa18.08■□□□□ 0.48
HDDC3-201ENST00000330334 IL9RQ01113 521 aa18.08■□□□□ 0.48
HDDC3-201ENST00000330334 POLD3Q15054 466 aaPredicted RBP18.08■□□□□ 0.48
HDDC3-201ENST00000330334 MCOLN2Q8IZK6 566 aa18.08■□□□□ 0.48
HDDC3-201ENST00000330334 GALNT15Q8N3T1 639 aa18.08■□□□□ 0.48
HDDC3-201ENST00000330334 BAP1Q92560 729 aa18.08■□□□□ 0.48
HDDC3-201ENST00000330334 MAGEB5Q9BZ81 275 aa18.08■□□□□ 0.48
HDDC3-201ENST00000330334 SEPT11Q9NVA2 429 aaKnown RBP18.08■□□□□ 0.48
HDDC3-201ENST00000330334 FTSJ1Q9UET6 329 aa18.08■□□□□ 0.48
HDDC3-201ENST00000330334 DNAI1Q9UI46 699 aa18.08■□□□□ 0.48
HDDC3-201ENST00000330334 TMEM131Q92545 1883 aa18.07■□□□□ 0.48
HDDC3-201ENST00000330334 A0A1W2PQC6 194 aa18.07■□□□□ 0.48
HDDC3-201ENST00000330334 WASH4PA8MWX3 477 aa18.07■□□□□ 0.48
HDDC3-201ENST00000330334 TEX33O43247 280 aa18.07■□□□□ 0.48
HDDC3-201ENST00000330334 KDELR3O43731 214 aa18.07■□□□□ 0.48
HDDC3-201ENST00000330334 GSRP00390 522 aa18.07■□□□□ 0.48
HDDC3-201ENST00000330334 CCNHP51946 323 aaPredicted RBP18.07■□□□□ 0.48
HDDC3-201ENST00000330334 NEK3P51956 506 aa18.07■□□□□ 0.48
HDDC3-201ENST00000330334 YBEYP58557 167 aaPredicted RBP18.07■□□□□ 0.48
HDDC3-201ENST00000330334 RPL7AP62424 266 aaKnown RBP18.07■□□□□ 0.48
HDDC3-201ENST00000330334 SMAD1Q15797 465 aaKnown RBP18.07■□□□□ 0.48
HDDC3-201ENST00000330334 FILIP1LQ4L180 1135 aa18.07■□□□□ 0.48
HDDC3-201ENST00000330334 TMEM259Q4ZIN3 620 aa18.07■□□□□ 0.48
HDDC3-201ENST00000330334 EFHC2Q5JST6 749 aa18.07■□□□□ 0.48
HDDC3-201ENST00000330334 SFMBT2Q5VUG0 894 aa18.07■□□□□ 0.48
HDDC3-201ENST00000330334 GATAD2AQ86YP4 633 aa18.07■□□□□ 0.48
HDDC3-201ENST00000330334 RTL3Q8N8U3 475 aaKnown RBP18.07■□□□□ 0.48
HDDC3-201ENST00000330334 GRIN3AQ8TCU5 1115 aa18.07■□□□□ 0.48
HDDC3-201ENST00000330334 CASKIN2Q8WXE0 1202 aa18.07■□□□□ 0.48
HDDC3-201ENST00000330334 ZCCHC14Q8WYQ9 949 aaKnown RBP18.07■□□□□ 0.48
HDDC3-201ENST00000330334 KLHDC7BQ96G42 594 aa18.07■□□□□ 0.48
HDDC3-201ENST00000330334 FEM1CQ96JP0 617 aa18.07■□□□□ 0.48
HDDC3-201ENST00000330334 DONSONQ9NYP3 566 aa18.07■□□□□ 0.48
HDDC3-201ENST00000330334 AIPL1Q9NZN9 384 aa18.07■□□□□ 0.48
HDDC3-201ENST00000330334 FCF1Q9Y324 198 aaKnown RBP18.07■□□□□ 0.48
HDDC3-201ENST00000330334 SLC31A1O15431 190 aa18.06■□□□□ 0.48
HDDC3-201ENST00000330334 CCP110O43303 1012 aa18.06■□□□□ 0.48
HDDC3-201ENST00000330334 POP4O95707 220 aaKnown RBP18.06■□□□□ 0.48
HDDC3-201ENST00000330334 ADRB3P13945 408 aa18.06■□□□□ 0.48
HDDC3-201ENST00000330334 DESP17661 470 aa18.06■□□□□ 0.48
HDDC3-201ENST00000330334 TNFAIP3P21580 790 aa18.06■□□□□ 0.48
HDDC3-201ENST00000330334 HNRNPA2B1P22626 353 aaKnown RBP18.06■□□□□ 0.48
HDDC3-201ENST00000330334 AKT2P31751 481 aa18.06■□□□□ 0.48
HDDC3-201ENST00000330334 HTR7P34969 479 aa18.06■□□□□ 0.48
HDDC3-201ENST00000330334 DNA2P51530 1060 aa18.06■□□□□ 0.48
HDDC3-201ENST00000330334 SNRPD1P62314 119 aaKnown RBP18.06■□□□□ 0.48
HDDC3-201ENST00000330334 RPS21P63220 83 aaKnown RBP18.06■□□□□ 0.48
HDDC3-201ENST00000330334 INO80DQ53TQ3 878 aaPredicted RBP18.06■□□□□ 0.48
HDDC3-201ENST00000330334 KIAA1161Q6NSJ0 714 aa18.06■□□□□ 0.48
HDDC3-201ENST00000330334 DCUN1D2Q6PH85 259 aa18.06■□□□□ 0.48
HDDC3-201ENST00000330334 KANSL1Q7Z3B3 1105 aa18.06■□□□□ 0.48
HDDC3-201ENST00000330334 RAB7BQ96AH8 199 aa18.06■□□□□ 0.48
HDDC3-201ENST00000330334 MCEEQ96PE7 176 aa18.06■□□□□ 0.48
HDDC3-201ENST00000330334 EPAS1Q99814 870 aa18.06■□□□□ 0.48
HDDC3-201ENST00000330334 EDEM3Q9BZQ6 932 aa18.06■□□□□ 0.48
HDDC3-201ENST00000330334 NOL6Q9H6R4 1146 aaKnown RBP18.06■□□□□ 0.48
HDDC3-201ENST00000330334 PARVAQ9NVD7 372 aa18.06■□□□□ 0.48
HDDC3-201ENST00000330334 KLHL11Q9NVR0 708 aa18.06■□□□□ 0.48
HDDC3-201ENST00000330334 FZD10Q9ULW2 581 aa18.06■□□□□ 0.48
HDDC3-201ENST00000330334 ZFR2Q9UPR6 939 aaKnown RBP18.06■□□□□ 0.48
HDDC3-201ENST00000330334 FADS3Q9Y5Q0 445 aa18.06■□□□□ 0.48
HDDC3-201ENST00000330334 HS3ST3A1Q9Y663 406 aa18.06■□□□□ 0.48
HDDC3-201ENST00000330334 COL5A1P20908 1838 aaPredicted RBP18.06■□□□□ 0.48
HDDC3-201ENST00000330334 CHD5Q8TDI0 1954 aa18.06■□□□□ 0.48
HDDC3-201ENST00000330334 ANKRD11Q6UB99 2663 aaPredicted RBP18.06■□□□□ 0.48
HDDC3-201ENST00000330334 SRRM3A6NNA2 597 aaPredicted RBP18.05■□□□□ 0.48
HDDC3-201ENST00000330334 EIF3CLB5ME19 914 aaKnown RBP18.05■□□□□ 0.48
HDDC3-201ENST00000330334 PCDH8O95206 1070 aa18.05■□□□□ 0.48
HDDC3-201ENST00000330334 LDOC1O95751 146 aaPredicted RBP18.05■□□□□ 0.48
HDDC3-201ENST00000330334 GZMAP12544 262 aa18.05■□□□□ 0.48
HDDC3-201ENST00000330334 EPHB2P29323 1055 aa18.05■□□□□ 0.48
HDDC3-201ENST00000330334 ZNF165P49910 485 aa18.05■□□□□ 0.48
HDDC3-201ENST00000330334 MAMLD1Q13495 774 aa18.05■□□□□ 0.48
HDDC3-201ENST00000330334 SCYL2Q6P3W7 929 aa18.05■□□□□ 0.48
HDDC3-201ENST00000330334 FBXL19Q6PCT2 694 aa18.05■□□□□ 0.48
HDDC3-201ENST00000330334 ABI3BPQ7Z7G0 1075 aa18.05■□□□□ 0.48
HDDC3-201ENST00000330334 DCP2Q8IU60 420 aaKnown RBP18.05■□□□□ 0.48
HDDC3-201ENST00000330334 UMODL1-AS1Q8N2C9 162 aa18.05■□□□□ 0.48
HDDC3-201ENST00000330334 OR2AP1Q8NGE2 309 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms