RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 ETV4P43268 484 aa10.51□□□□□ -0.73
ABCF1-201ENST00000326195 PPP6R3Q5H9R7 873 aaPredicted RBP10.51□□□□□ -0.73
ABCF1-201ENST00000326195 RABGAP1LQ5R372 815 aa10.51□□□□□ -0.73
ABCF1-201ENST00000326195 BSPRYQ5W0U4 402 aa10.51□□□□□ -0.73
ABCF1-201ENST00000326195 Q7L0L9 218 aa10.51□□□□□ -0.73
ABCF1-201ENST00000326195 HPS6Q86YV9 775 aa10.51□□□□□ -0.73
ABCF1-201ENST00000326195 FAM71DQ8N9W8 422 aa10.51□□□□□ -0.73
ABCF1-201ENST00000326195 ICA1LQ8NDH6 482 aa10.51□□□□□ -0.73
ABCF1-201ENST00000326195 SPATA18Q8TC71 538 aa10.51□□□□□ -0.73
ABCF1-201ENST00000326195 LRCH3Q96II8 777 aa10.51□□□□□ -0.73
ABCF1-201ENST00000326195 PIWIL1Q96J94 861 aaKnown RBP10.51□□□□□ -0.73
ABCF1-201ENST00000326195 HNRNPABQ99729 332 aaKnown RBP10.51□□□□□ -0.73
ABCF1-201ENST00000326195 HEPHQ9BQS7 1158 aa10.51□□□□□ -0.73
ABCF1-201ENST00000326195 WDR83Q9BRX9 315 aaKnown RBP10.51□□□□□ -0.73
ABCF1-201ENST00000326195 MRPL9Q9BYD2 267 aaKnown RBP10.51□□□□□ -0.73
ABCF1-201ENST00000326195 ASNSD1Q9NWL6 643 aa10.51□□□□□ -0.73
ABCF1-201ENST00000326195 SF3B1O75533 1304 aaKnown RBP eCLIP10.51□□□□□ -0.732e-6■■■■■ 102.7
ABCF1-201ENST00000326195 CILPO75339 1184 aa10.51□□□□□ -0.73
ABCF1-201ENST00000326195 RFPL2O75678 378 aa10.51□□□□□ -0.73
ABCF1-201ENST00000326195 CRTAMO95727 393 aa10.51□□□□□ -0.73
ABCF1-201ENST00000326195 THRAP10827 490 aa10.51□□□□□ -0.73
ABCF1-201ENST00000326195 MLLT1Q03111 559 aaPredicted RBP10.51□□□□□ -0.73
ABCF1-201ENST00000326195 KLF1Q13351 362 aaPredicted RBP10.51□□□□□ -0.73
ABCF1-201ENST00000326195 MAP7D1Q3KQU3 841 aa10.51□□□□□ -0.73
ABCF1-201ENST00000326195 C6orf52Q5T4I8 152 aa10.51□□□□□ -0.73
ABCF1-201ENST00000326195 ARID3BQ8IVW6 561 aaPredicted RBP10.51□□□□□ -0.73
ABCF1-201ENST00000326195 MARVELD2Q8N4S9 558 aa10.51□□□□□ -0.73
ABCF1-201ENST00000326195 NETO2Q8NC67 525 aa10.51□□□□□ -0.73
ABCF1-201ENST00000326195 CXorf38Q8TB03 319 aa10.51□□□□□ -0.73
ABCF1-201ENST00000326195 DHRS1Q96LJ7 313 aa10.51□□□□□ -0.73
ABCF1-201ENST00000326195 TBCCD1Q9NVR7 557 aa10.51□□□□□ -0.73
ABCF1-201ENST00000326195 XPO7Q9UIA9 1087 aaKnown RBP10.51□□□□□ -0.73
ABCF1-201ENST00000326195 COLQQ9Y215 455 aaPredicted RBP10.51□□□□□ -0.73
ABCF1-201ENST00000326195 SQORQ9Y6N5 450 aa10.51□□□□□ -0.73
ABCF1-201ENST00000326195 IQANK1A0A1B0GTG1 560 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 LINC01553A4QN01 128 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 LSM8O95777 96 aaKnown RBP10.5□□□□□ -0.73
ABCF1-201ENST00000326195 ZBED1O96006 694 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 FUCA1P04066 466 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 USP17L7P0C7H9 530 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 RFC1P35251 1148 aaPredicted RBP10.5□□□□□ -0.73
ABCF1-201ENST00000326195 PNPLA4P41247 253 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 TMEM214Q6NUQ4 689 aaKnown RBP10.5□□□□□ -0.73
ABCF1-201ENST00000326195 PMF1Q6P1K2 205 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 RNF19BQ6ZMZ0 732 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 PPIL6Q8IXY8 311 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 CCDC33Q8N5R6 958 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 KHSRPQ92945 711 aaKnown RBP eCLIP10.5□□□□□ -0.73
ABCF1-201ENST00000326195 DCUN1D1Q96GG9 259 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 AGAP3Q96P47 875 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 NEURL2Q9BR09 285 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 NACA2Q9H009 215 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 CWH43Q9H720 699 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 DOCK6Q96HP0 2047 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 CCDC195A0A1B0GUA6 201 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 TMEM191CA6NGB0 347 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 MDM4O15151 490 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 TGDSO95455 350 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 OXSR1O95747 527 aaPredicted RBP10.5□□□□□ -0.73
ABCF1-201ENST00000326195 CD1EP15812 388 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 CYP3A5P20815 502 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 CDKL1Q00532 357 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 TFDP2Q14188 446 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 C6orf183Q5T699 404 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 ITPRIPL1Q6GPH6 555 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 AAGABQ6PD74 315 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 POTEHQ6S545 545 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 KYAT3Q6YP21 454 aaKnown RBP10.5□□□□□ -0.73
ABCF1-201ENST00000326195 DENND5BQ6ZUT9 1274 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 LRRC52Q8N7C0 313 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 PPM1NQ8N819 430 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 COLGALT1Q8NBJ5 622 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 SLC22A17Q8WUG5 538 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 PCDH9Q9HC56 1237 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 TMEM30AQ9NV96 361 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 FUOMA2VDF0 154 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 LPXNO60711 386 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 DHRS4L1P0CG22 281 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 SRGAP2BP0DMP2 458 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 TCF4P15884 667 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 PDGFRAP16234 1089 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 AQP5P55064 265 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 ROR1Q01973 937 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 ADIGQ0VDE8 80 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 NME3Q13232 169 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 USP41Q3LFD5 358 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 TMC5Q6UXY8 1006 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 TTC30AQ86WT1 665 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 MIB1Q86YT6 1006 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 FBXO22Q8NEZ5 403 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 TNIP3Q96KP6 325 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 TSPAN18Q96SJ8 248 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 CPXM1Q96SM3 734 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 PAFAH2Q99487 392 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 FERMT1Q9BQL6 677 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 VN1R3Q9BXE9 311 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 TRPC7Q9HCX4 862 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 MRPL17Q9NRX2 175 aaKnown RBP10.5□□□□□ -0.73
ABCF1-201ENST00000326195 SMPD4Q9NXE4 827 aa10.5□□□□□ -0.73
ABCF1-201ENST00000326195 MSRAQ9UJ68 235 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms