RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 ARMC5Q96C12 935 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 UROC1Q96N76 676 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 CCDC28BQ9BUN5 200 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 ZNF385DQ9H6B1 395 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 ARHGAP26Q9UNA1 814 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 MYLKQ15746 1914 aa25.42■■□□□ 1.66
ROM1-201ENST00000278833 NUP205Q92621 2012 aa25.42■■□□□ 1.66
ROM1-201ENST00000278833 MATN3O15232 486 aa25.42■■□□□ 1.66
ROM1-201ENST00000278833 BUD23O43709 281 aaKnown RBP25.42■■□□□ 1.66
ROM1-201ENST00000278833 SBK3P0C264 359 aa25.42■■□□□ 1.66
ROM1-201ENST00000278833 LINGO3P0C6S8 592 aa25.42■■□□□ 1.66
ROM1-201ENST00000278833 GMPRP36959 345 aa25.42■■□□□ 1.66
ROM1-201ENST00000278833 AFF1P51825 1210 aaKnown RBP25.42■■□□□ 1.66
ROM1-201ENST00000278833 ASPHQ12797 758 aa25.42■■□□□ 1.66
ROM1-201ENST00000278833 PRKAA1Q13131 559 aa25.42■■□□□ 1.66
ROM1-201ENST00000278833 HNRNPDQ14103 355 aaKnown RBP25.42■■□□□ 1.66
ROM1-201ENST00000278833 PPP2R5DQ14738 602 aa25.42■■□□□ 1.66
ROM1-201ENST00000278833 DENND5AQ6IQ26 1287 aa25.42■■□□□ 1.66
ROM1-201ENST00000278833 TIGD7Q6NT04 549 aaPredicted RBP25.42■■□□□ 1.66
ROM1-201ENST00000278833 CD300LGQ6UXG3 332 aa25.42■■□□□ 1.66
ROM1-201ENST00000278833 ATXN7L3BQ96GX2 97 aa25.42■■□□□ 1.66
ROM1-201ENST00000278833 TCF7L2Q9NQB0 619 aa25.42■■□□□ 1.66
ROM1-201ENST00000278833 ENTPD7Q9NQZ7 604 aa25.42■■□□□ 1.66
ROM1-201ENST00000278833 ABCC13Q9NSE7 274 aa25.42■■□□□ 1.66
ROM1-201ENST00000278833 WASH4PA8MWX3 477 aa25.41■■□□□ 1.66
ROM1-201ENST00000278833 HDAC3O15379 428 aa25.41■■□□□ 1.66
ROM1-201ENST00000278833 CHRNA1P02708 482 aa25.41■■□□□ 1.66
ROM1-201ENST00000278833 SLC35E2BP0CK96 405 aa25.41■■□□□ 1.66
ROM1-201ENST00000278833 ARCN1P48444 511 aaKnown RBP25.41■■□□□ 1.66
ROM1-201ENST00000278833 HERC3Q15034 1050 aa25.41■■□□□ 1.66
ROM1-201ENST00000278833 SLC9B1Q4ZJI4 515 aa25.41■■□□□ 1.66
ROM1-201ENST00000278833 VWA5B1Q5TIE3 1220 aa25.41■■□□□ 1.66
ROM1-201ENST00000278833 POU5F2Q8N7G0 328 aa25.41■■□□□ 1.66
ROM1-201ENST00000278833 PPHLN1Q8NEY8 458 aaKnown RBP25.41■■□□□ 1.66
ROM1-201ENST00000278833 GATA6Q92908 595 aa25.41■■□□□ 1.66
ROM1-201ENST00000278833 SPDL1Q96EA4 605 aa25.41■■□□□ 1.66
ROM1-201ENST00000278833 OXCT2Q9BYC2 517 aaPredicted RBP25.41■■□□□ 1.66
ROM1-201ENST00000278833 UPF3AQ9H1J1 476 aaKnown RBP25.41■■□□□ 1.66
ROM1-201ENST00000278833 PRPF19Q9UMS4 504 aaKnown RBP25.41■■□□□ 1.66
ROM1-201ENST00000278833 PLXNA3P51805 1871 aa25.41■■□□□ 1.66
ROM1-201ENST00000278833 CASTOR2A6NHX0 329 aa25.4■■□□□ 1.66
ROM1-201ENST00000278833 ZBTB14O43829 449 aa25.4■■□□□ 1.66
ROM1-201ENST00000278833 MAFKO60675 156 aa25.4■■□□□ 1.66
ROM1-201ENST00000278833 DDHD2O94830 711 aa25.4■■□□□ 1.66
ROM1-201ENST00000278833 SERPINB5P36952 375 aa25.4■■□□□ 1.66
ROM1-201ENST00000278833 RPL26P61254 145 aaKnown RBP25.4■■□□□ 1.66
ROM1-201ENST00000278833 DSG1Q02413 1049 aa25.4■■□□□ 1.66
ROM1-201ENST00000278833 GRIK3Q13003 919 aa25.4■■□□□ 1.66
ROM1-201ENST00000278833 KIAA0930Q6ICG6 404 aaPredicted RBP25.4■■□□□ 1.66
ROM1-201ENST00000278833 PHTF2Q8N3S3 785 aa25.4■■□□□ 1.66
ROM1-201ENST00000278833 ACVR1CQ8NER5 493 aa25.4■■□□□ 1.66
ROM1-201ENST00000278833 LPPQ93052 612 aa25.4■■□□□ 1.66
ROM1-201ENST00000278833 APOL2Q9BQE5 337 aa25.4■■□□□ 1.66
ROM1-201ENST00000278833 SLC39A10Q9ULF5 831 aa25.4■■□□□ 1.66
ROM1-201ENST00000278833 PPM1HQ9ULR3 514 aa25.4■■□□□ 1.66
ROM1-201ENST00000278833 TCAF1Q9Y4C2 921 aa25.4■■□□□ 1.66
ROM1-201ENST00000278833 NYNRINQ9P2P1 1898 aaKnown RBP25.4■■□□□ 1.66
ROM1-201ENST00000278833 MAGEA13PA6NCF6 341 aa25.4■■□□□ 1.66
ROM1-201ENST00000278833 TYMPP19971 482 aa25.4■■□□□ 1.66
ROM1-201ENST00000278833 BDNFP23560 247 aa25.4■■□□□ 1.66
ROM1-201ENST00000278833 RPL14P50914 215 aaKnown RBP25.4■■□□□ 1.66
ROM1-201ENST00000278833 MTTPP55157 894 aa25.4■■□□□ 1.66
ROM1-201ENST00000278833 USP4Q13107 963 aa25.4■■□□□ 1.66
ROM1-201ENST00000278833 CCNIQ14094 377 aa25.4■■□□□ 1.66
ROM1-201ENST00000278833 DSC3Q14574 896 aa25.4■■□□□ 1.66
ROM1-201ENST00000278833 OTOP3Q7RTS5 596 aa25.4■■□□□ 1.66
ROM1-201ENST00000278833 DHDDSQ86SQ9 333 aa25.4■■□□□ 1.66
ROM1-201ENST00000278833 TRPV1Q8NER1 839 aa25.4■■□□□ 1.66
ROM1-201ENST00000278833 MAPK15Q8TD08 544 aa25.4■■□□□ 1.66
ROM1-201ENST00000278833 CELF6Q96J87 481 aaKnown RBP25.4■■□□□ 1.66
ROM1-201ENST00000278833 ECSITQ9BQ95 431 aa25.4■■□□□ 1.66
ROM1-201ENST00000278833 RHOBTB2Q9BYZ6 727 aa25.4■■□□□ 1.66
ROM1-201ENST00000278833 PRKD2Q9BZL6 878 aa25.4■■□□□ 1.66
ROM1-201ENST00000278833 UBE2OQ9C0C9 1292 aaKnown RBP25.4■■□□□ 1.66
ROM1-201ENST00000278833 TASP1Q9H6P5 420 aa25.4■■□□□ 1.66
ROM1-201ENST00000278833 TREX1Q9NSU2 369 aa25.4■■□□□ 1.66
ROM1-201ENST00000278833 VPS28Q9UK41 221 aa25.4■■□□□ 1.66
ROM1-201ENST00000278833 DPPA5A6NC42 116 aa25.39■■□□□ 1.66
ROM1-201ENST00000278833 INPPL1O15357 1258 aa25.39■■□□□ 1.66
ROM1-201ENST00000278833 PDHA1P08559 390 aa25.39■■□□□ 1.66
ROM1-201ENST00000278833 TPH1P17752 444 aa25.39■■□□□ 1.66
ROM1-201ENST00000278833 PAX7P23759 505 aa25.39■■□□□ 1.66
ROM1-201ENST00000278833 GABRB3P28472 473 aa25.39■■□□□ 1.66
ROM1-201ENST00000278833 USP10Q14694 798 aaKnown RBP25.39■■□□□ 1.66
ROM1-201ENST00000278833 SMAD1Q15797 465 aaKnown RBP25.39■■□□□ 1.66
ROM1-201ENST00000278833 FRMD7Q6ZUT3 714 aa25.39■■□□□ 1.66
ROM1-201ENST00000278833 CENPLQ8N0S6 344 aaPredicted RBP25.39■■□□□ 1.66
ROM1-201ENST00000278833 FBXW8Q8N3Y1 598 aa25.39■■□□□ 1.66
ROM1-201ENST00000278833 VCX3BQ9H321 246 aa25.39■■□□□ 1.66
ROM1-201ENST00000278833 NPHS1O60500 1241 aa25.38■■□□□ 1.65
ROM1-201ENST00000278833 THRAP10827 490 aa25.38■■□□□ 1.65
ROM1-201ENST00000278833 CYBAP13498 195 aa25.38■■□□□ 1.65
ROM1-201ENST00000278833 NCF2P19878 526 aaPredicted RBP25.38■■□□□ 1.65
ROM1-201ENST00000278833 SP100P23497 879 aaPredicted RBP25.38■■□□□ 1.65
ROM1-201ENST00000278833 CCND3P30281 292 aaPredicted RBP25.38■■□□□ 1.65
ROM1-201ENST00000278833 KPNA2P52292 529 aaKnown RBP25.38■■□□□ 1.65
ROM1-201ENST00000278833 NSUN2Q08J23 767 aaKnown RBP eCLIP25.38■■□□□ 1.65
ROM1-201ENST00000278833 RALGPS1Q5JS13 557 aa25.38■■□□□ 1.65
ROM1-201ENST00000278833 SEL1L3Q68CR1 1132 aa25.38■■□□□ 1.65
ROM1-201ENST00000278833 GDF6Q6KF10 455 aaPredicted RBP25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms