RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 COX4I1P13073 169 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 CPT1AP50416 773 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 DSG1Q02413 1049 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 SEL1L3Q68CR1 1132 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 OVOS1Q6IE37 1185 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 SPATA2LQ8IUW3 424 aaPredicted RBP13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 CMTM5Q96DZ9 223 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 EXOC2Q96KP1 924 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 CCDC167Q9P0B6 97 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 MYO7AQ13402 2215 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 CAPN8A6NHC0 703 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 GPC4O75487 556 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 PGM3O95394 542 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 GSRP00390 522 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 GNAT1P11488 350 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 CCNFP41002 786 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 MAGEA3P43357 314 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 LIMK2P53671 638 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 CDH17Q12864 832 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 GRB14Q14449 540 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 TRMT5Q32P41 509 aaKnown RBP13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 ZNF789Q5FWF6 425 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 SPANXN3Q5MJ09 141 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 CYP2R1Q6VVX0 501 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 ARCQ7LC44 396 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 LRRTM3Q86VH5 581 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 BLOC1S5Q8TDH9 187 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 GDPD5Q8WTR4 605 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 SMARCD1Q96GM5 515 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 SLC45A3Q96JT2 553 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 RRAGCQ9HB90 399 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 ZDHHC2Q9UIJ5 367 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 CDH22Q9UJ99 828 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 LRCH1Q9Y2L9 728 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 SLC27A5Q9Y2P5 690 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 CDY1Q9Y6F8 540 aa13.88□□□□□ -0.19
PRPF40B-209ENST00000548825 COL1A2P08123 1366 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 A0A088AWK7 358 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 BIRC5O15392 142 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 CRYBB1P53674 252 aaPredicted RBP13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 DPYSQ14117 519 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 LSM12Q3MHD2 195 aaKnown RBP13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 PITRM1Q5JRX3 1037 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 NAPEPLDQ6IQ20 393 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 MAB21L3Q8N8X9 362 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 PHC3Q8NDX5 983 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 SPON2Q9BUD6 331 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 COPS7BQ9H9Q2 264 aaPredicted RBP13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 ACOT9Q9Y305 439 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 BPTFQ12830 3046 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 ZCWPW2A0A1B0GU75 182 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 FAM95CA0A1B0GW59 222 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 NCF1BA6NI72 391 aaPredicted RBP13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 NCF1CA8MVU1 366 aaPredicted RBP13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 TPST1O60507 370 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 NCF1P14598 390 aaPredicted RBP13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 SP100P23497 879 aaPredicted RBP13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 GRK2P25098 689 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 AQP4P55087 323 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 TRIM32Q13049 653 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 KLF10Q13118 480 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 RBM20Q5T481 1227 aaKnown RBP13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 GDF6Q6KF10 455 aaPredicted RBP13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 CNSTQ6PJW8 725 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 ALKAL1Q6UXT8 129 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 C4orf22Q6V702 233 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 CEP97Q8IW35 865 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 DCBLD1Q8N8Z6 715 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 SLC39A8Q9C0K1 460 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 GDAP2Q9NXN4 497 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 COMMD10Q9Y6G5 202 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 UBA6A0AVT1 1052 aaPredicted RBP13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 NT5C1B-RDH14C9J2C7 533 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 KLF11O14901 512 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 CNTFP26441 200 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 PCSK1P29120 753 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 PLIN5Q00G26 463 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 MAP2K5Q13163 448 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 SLC12A1Q13621 1099 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 LDLRAD1Q5T700 205 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 IYDQ6PHW0 289 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 ENDOVQ8N8Q3 282 aaKnown RBP13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 ATAD1Q8NBU5 361 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 OR52K2Q8NGK3 314 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 KCNN1Q92952 543 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 TUBGCP5Q96RT8 1024 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 NACA2Q9H009 215 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 ARHGEF38Q9NXL2 777 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 GIMAP2Q9UG22 337 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 APPL1Q9UKG1 709 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 ARHGAP26Q9UNA1 814 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 KCTD3Q9Y597 815 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 V9GYQ6 96 aa13.87□□□□□ -0.19
PRPF40B-209ENST00000548825 A0A0U1RQS6 177 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 STMN1P16949 149 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 TFEBP19484 476 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 CD86P42081 329 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 GLUD2P49448 558 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 TAS2R39P59534 338 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 PRAMEP78395 509 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms