RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 TM9SF3Q9HD45 589 aa17.56■□□□□ 0.4
SFSWAP-205ENST00000537164 ARHGAP20Q9P2F6 1191 aa17.56■□□□□ 0.4
SFSWAP-205ENST00000537164 TP53BP1Q12888 1972 aaPredicted RBP17.56■□□□□ 0.4
SFSWAP-205ENST00000537164 A0A087X0T9 212 aa17.55■□□□□ 0.4
SFSWAP-205ENST00000537164 FGF10O15520 208 aaPredicted RBP17.55■□□□□ 0.4
SFSWAP-205ENST00000537164 CBFA2T2O43439 604 aa17.55■□□□□ 0.4
SFSWAP-205ENST00000537164 LATO43561 262 aa17.55■□□□□ 0.4
SFSWAP-205ENST00000537164 PLRG1O43660 514 aaKnown RBP17.55■□□□□ 0.4
SFSWAP-205ENST00000537164 LRCH4O75427 683 aa17.55■□□□□ 0.4
SFSWAP-205ENST00000537164 RNF8O76064 485 aa17.55■□□□□ 0.4
SFSWAP-205ENST00000537164 FSBPO95073 299 aa17.55■□□□□ 0.4
SFSWAP-205ENST00000537164 PRNPP04156 253 aa17.55■□□□□ 0.4
SFSWAP-205ENST00000537164 ADRB1P08588 477 aa17.55■□□□□ 0.4
SFSWAP-205ENST00000537164 FAM228BP0C875 321 aa17.55■□□□□ 0.4
SFSWAP-205ENST00000537164 GRIA4P48058 902 aa17.55■□□□□ 0.4
SFSWAP-205ENST00000537164 POLD3Q15054 466 aaPredicted RBP17.55■□□□□ 0.4
SFSWAP-205ENST00000537164 ERMARDQ5T6L9 678 aa17.55■□□□□ 0.4
SFSWAP-205ENST00000537164 AGBL4Q5VU57 503 aa17.55■□□□□ 0.4
SFSWAP-205ENST00000537164 SPECC1LQ69YQ0 1117 aa17.55■□□□□ 0.4
SFSWAP-205ENST00000537164 PIP4P1Q86T03 277 aa17.55■□□□□ 0.4
SFSWAP-205ENST00000537164 OR14C36Q8NHC7 312 aa17.55■□□□□ 0.4
SFSWAP-205ENST00000537164 GTPBP2Q9BX10 602 aaKnown RBP17.55■□□□□ 0.4
SFSWAP-205ENST00000537164 CATSPERBQ9H7T0 1116 aa17.55■□□□□ 0.4
SFSWAP-205ENST00000537164 EBF2Q9HAK2 575 aa17.55■□□□□ 0.4
SFSWAP-205ENST00000537164 DONSONQ9NYP3 566 aa17.55■□□□□ 0.4
SFSWAP-205ENST00000537164 NENFQ9UMX5 172 aa17.55■□□□□ 0.4
SFSWAP-205ENST00000537164 AP4E1Q9UPM8 1137 aa17.55■□□□□ 0.4
SFSWAP-205ENST00000537164 TMEM131Q92545 1883 aa17.54■□□□□ 0.4
SFSWAP-205ENST00000537164 CEP295Q9C0D2 2601 aa17.54■□□□□ 0.4
SFSWAP-205ENST00000537164 DOCK9Q9BZ29 2069 aa17.54■□□□□ 0.4
SFSWAP-205ENST00000537164 ZSCAN5CA6NGD5 496 aaPredicted RBP17.54■□□□□ 0.4
SFSWAP-205ENST00000537164 KDELR3O43731 214 aa17.54■□□□□ 0.4
SFSWAP-205ENST00000537164 OPHN1O60890 802 aa17.54■□□□□ 0.4
SFSWAP-205ENST00000537164 ZNF883P0CG24 379 aa17.54■□□□□ 0.4
SFSWAP-205ENST00000537164 CEACAM1P13688 526 aa17.54■□□□□ 0.4
SFSWAP-205ENST00000537164 PCK1P35558 622 aa17.54■□□□□ 0.4
SFSWAP-205ENST00000537164 ZNF135P52742 658 aaPredicted RBP17.54■□□□□ 0.4
SFSWAP-205ENST00000537164 RACK1P63244 317 aaKnown RBP17.54■□□□□ 0.4
SFSWAP-205ENST00000537164 CNTN1Q12860 1018 aa17.54■□□□□ 0.4
SFSWAP-205ENST00000537164 TRIM14Q14142 442 aa17.54■□□□□ 0.4
SFSWAP-205ENST00000537164 NFKBIBQ15653 356 aa17.54■□□□□ 0.4
SFSWAP-205ENST00000537164 IL27RAQ6UWB1 636 aa17.54■□□□□ 0.4
SFSWAP-205ENST00000537164 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.54■□□□□ 0.4
SFSWAP-205ENST00000537164 DPY19L3Q6ZPD9 716 aa17.54■□□□□ 0.4
SFSWAP-205ENST00000537164 SNX19Q92543 992 aa17.54■□□□□ 0.4
SFSWAP-205ENST00000537164 PEBP4Q96S96 227 aa17.54■□□□□ 0.4
SFSWAP-205ENST00000537164 DNAJC7Q99615 494 aa17.54■□□□□ 0.4
SFSWAP-205ENST00000537164 IL36AQ9UHA7 158 aa17.54■□□□□ 0.4
SFSWAP-205ENST00000537164 HPCAL4Q9UM19 191 aa17.54■□□□□ 0.4
SFSWAP-205ENST00000537164 WASF2Q9Y6W5 498 aa17.54■□□□□ 0.4
SFSWAP-205ENST00000537164 FAM47DPA6NHR8 397 aa17.53■□□□□ 0.4
SFSWAP-205ENST00000537164 CREB3O43889 395 aa17.53■□□□□ 0.4
SFSWAP-205ENST00000537164 CYP1A2P05177 515 aa17.53■□□□□ 0.4
SFSWAP-205ENST00000537164 CD59P13987 128 aa17.53■□□□□ 0.4
SFSWAP-205ENST00000537164 MIPP30301 263 aa17.53■□□□□ 0.4
SFSWAP-205ENST00000537164 NUDT1P36639 197 aa17.53■□□□□ 0.4
SFSWAP-205ENST00000537164 CSNK1EP49674 416 aaKnown RBP17.53■□□□□ 0.4
SFSWAP-205ENST00000537164 TAS2R38P59533 333 aa17.53■□□□□ 0.4
SFSWAP-205ENST00000537164 CCDC15Q0P6D6 951 aa17.53■□□□□ 0.4
SFSWAP-205ENST00000537164 UAP1L1Q3KQV9 507 aa17.53■□□□□ 0.4
SFSWAP-205ENST00000537164 PARP15Q460N3 678 aa17.53■□□□□ 0.4
SFSWAP-205ENST00000537164 CARD16Q5EG05 197 aa17.53■□□□□ 0.4
SFSWAP-205ENST00000537164 PIP5KL1Q5T9C9 394 aa17.53■□□□□ 0.4
SFSWAP-205ENST00000537164 ALKBH5Q6P6C2 394 aaKnown RBP17.53■□□□□ 0.4
SFSWAP-205ENST00000537164 TRIM69Q86WT6 500 aa17.53■□□□□ 0.4
SFSWAP-205ENST00000537164 NIPA2Q8N8Q9 360 aa17.53■□□□□ 0.4
SFSWAP-205ENST00000537164 CHST14Q8NCH0 376 aa17.53■□□□□ 0.4
SFSWAP-205ENST00000537164 CASKIN2Q8WXE0 1202 aa17.53■□□□□ 0.4
SFSWAP-205ENST00000537164 VOPP1Q96AW1 172 aa17.53■□□□□ 0.4
SFSWAP-205ENST00000537164 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.53■□□□□ 0.4
SFSWAP-205ENST00000537164 SNRNP25Q9BV90 132 aaKnown RBP17.53■□□□□ 0.4
SFSWAP-205ENST00000537164 HDAC8Q9BY41 377 aa17.53■□□□□ 0.4
SFSWAP-205ENST00000537164 THAP2Q9H0W7 228 aa17.53■□□□□ 0.4
SFSWAP-205ENST00000537164 TNKS2Q9H2K2 1166 aa17.53■□□□□ 0.4
SFSWAP-205ENST00000537164 CABIN1Q9Y6J0 2220 aa17.53■□□□□ 0.4
SFSWAP-205ENST00000537164 RNF103O00237 685 aa17.52■□□□□ 0.4
SFSWAP-205ENST00000537164 PLK4O00444 970 aa17.52■□□□□ 0.4
SFSWAP-205ENST00000537164 BNIP3LO60238 219 aa17.52■□□□□ 0.4
SFSWAP-205ENST00000537164 PRPSAP2O60256 369 aa17.52■□□□□ 0.4
SFSWAP-205ENST00000537164 RECQLP46063 649 aaPredicted RBP17.52■□□□□ 0.4
SFSWAP-205ENST00000537164 HCAR3P49019 387 aa17.52■□□□□ 0.4
SFSWAP-205ENST00000537164 NDST2P52849 883 aa17.52■□□□□ 0.4
SFSWAP-205ENST00000537164 TPI1P60174 286 aa17.52■□□□□ 0.4
SFSWAP-205ENST00000537164 SERINC3Q13530 473 aa17.52■□□□□ 0.4
SFSWAP-205ENST00000537164 PIGHQ14442 188 aaPredicted RBP17.52■□□□□ 0.4
SFSWAP-205ENST00000537164 TEAD4Q15561 434 aa17.52■□□□□ 0.4
SFSWAP-205ENST00000537164 CA9Q16790 459 aa17.52■□□□□ 0.4
SFSWAP-205ENST00000537164 ASTE1Q2TB18 679 aaPredicted RBP17.52■□□□□ 0.4
SFSWAP-205ENST00000537164 INO80DQ53TQ3 878 aaPredicted RBP17.52■□□□□ 0.4
SFSWAP-205ENST00000537164 NEK5Q6P3R8 708 aa17.52■□□□□ 0.4
SFSWAP-205ENST00000537164 DBX2Q6ZNG2 339 aa17.52■□□□□ 0.4
SFSWAP-205ENST00000537164 VSTM4Q8IW00 320 aa17.52■□□□□ 0.4
SFSWAP-205ENST00000537164 OR8K1Q8NGG5 319 aa17.52■□□□□ 0.4
SFSWAP-205ENST00000537164 OR2I1PQ8NGU4 316 aa17.52■□□□□ 0.4
SFSWAP-205ENST00000537164 ARRDC3Q96B67 414 aa17.52■□□□□ 0.4
SFSWAP-205ENST00000537164 LRIG1Q96JA1 1093 aa17.52■□□□□ 0.4
SFSWAP-205ENST00000537164 HEPHQ9BQS7 1158 aa17.52■□□□□ 0.4
SFSWAP-205ENST00000537164 LRRC19Q9H756 370 aa17.52■□□□□ 0.4
SFSWAP-205ENST00000537164 PREBQ9HCU5 417 aa17.52■□□□□ 0.4
SFSWAP-205ENST00000537164 MYO1AQ9UBC5 1043 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms