RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 ERVK-10P10266 1014 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 ETV4P43268 484 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 CHN2P52757 468 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 SLC5A3P53794 718 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 SCAPQ12770 1279 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 ZBTB17Q13105 803 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 TRIM71Q2Q1W2 868 aaKnown RBP11.76□□□□□ -0.53
USP35-207ENST00000530546 DNAL1Q4LDG9 190 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 SLC44A4Q53GD3 710 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 BTBD8Q5XKL5 378 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 DUS1LQ6P1R4 473 aaKnown RBP11.76□□□□□ -0.53
USP35-207ENST00000530546 DCLRE1AQ6PJP8 1040 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 GLB1LQ6UWU2 654 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 NCCRP1Q6ZVX7 275 aaPredicted RBP11.76□□□□□ -0.53
USP35-207ENST00000530546 ARNTL2Q8WYA1 636 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 ABTB1Q969K4 478 aaPredicted RBP11.76□□□□□ -0.53
USP35-207ENST00000530546 ZNF180Q9UJW8 692 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 M0QZQ0 153 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 VILLO15195 856 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 CYP11A1P05108 521 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 CDK4P11802 303 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 CKBP12277 381 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 TPH1P17752 444 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 ATXN7L3BQ96GX2 97 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 DSEQ9UL01 958 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 PSAT1Q9Y617 370 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 C2orf71A6NGG8 1288 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 NFKB1P19838 968 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 GPR15P49685 360 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 AIF1P55008 147 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 PLOD1Q02809 727 aaPredicted RBP11.76□□□□□ -0.53
USP35-207ENST00000530546 CCDC92Q53HC0 331 aaPredicted RBP11.76□□□□□ -0.53
USP35-207ENST00000530546 PM20D1Q6GTS8 502 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 C16orf46Q6P387 395 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 KYAT3Q6YP21 454 aaKnown RBP11.76□□□□□ -0.53
USP35-207ENST00000530546 ARHGAP36Q6ZRI8 547 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 ZNF598Q86UK7 904 aaKnown RBP11.76□□□□□ -0.53
USP35-207ENST00000530546 CD99L2Q8TCZ2 262 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 GAB3Q8WWW8 586 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 PGAP3Q96FM1 320 aaPredicted RBP11.76□□□□□ -0.53
USP35-207ENST00000530546 SUSD3Q96L08 255 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 GLT1D1Q96MS3 346 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 PANX3Q96QZ0 392 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 PKMYT1Q99640 499 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 ZNF395Q9H8N7 513 aaPredicted RBP11.76□□□□□ -0.53
USP35-207ENST00000530546 MOCS1Q9NZB8 636 aa11.76□□□□□ -0.53
USP35-207ENST00000530546 SF3B1O75533 1304 aaKnown RBP eCLIP11.75□□□□□ -0.53
USP35-207ENST00000530546 BAG2O95816 211 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 IL1BP01584 269 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 RPLP2P05387 115 aaKnown RBP11.75□□□□□ -0.53
USP35-207ENST00000530546 MLNP12872 115 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 PGAM1P18669 254 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 GMPRP36959 345 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 ABCG1P45844 678 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 ARPP19P56211 112 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 PPIDQ08752 370 aaKnown RBP11.75□□□□□ -0.53
USP35-207ENST00000530546 MBTPS1Q14703 1052 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 PPP2R5DQ14738 602 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 DDR2Q16832 855 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 DHDDSQ86SQ9 333 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 NUP93Q8N1F7 819 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 GPR152Q8TDT2 470 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 ZNF669Q96BR6 464 aaPredicted RBP11.75□□□□□ -0.53
USP35-207ENST00000530546 ZFRQ96KR1 1074 aaKnown RBP11.75□□□□□ -0.53
USP35-207ENST00000530546 TTC1Q99614 292 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 TMEM120AQ9BXJ8 343 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 RRN3Q9NYV6 651 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 PLK2Q9NYY3 685 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 IGSF9Q9P2J2 1179 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 PLLPQ9Y342 182 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 ARHGAP10A1A4S6 786 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 DHRS4L1P0CG22 281 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 ZNF24P17028 368 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 VCLP18206 1134 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 CD68P34810 354 aaPredicted RBP11.75□□□□□ -0.53
USP35-207ENST00000530546 GARSP41250 739 aaKnown RBP11.75□□□□□ -0.53
USP35-207ENST00000530546 GJA8P48165 433 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 EMP3P54852 163 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 ANKRD20A4Q4UJ75 823 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 CLLU1OSQ5K130 101 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 CERCAMQ5T4B2 595 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 PACS1Q6VY07 963 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 RAPH1Q70E73 1250 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 ULK2Q8IYT8 1036 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 CDKL2Q92772 493 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 CASP10Q92851 521 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 B3GALT6Q96L58 329 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 BTBD9Q96Q07 612 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 KLHL4Q9C0H6 718 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 NMUR1Q9HB89 426 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 EIF2B3Q9NR50 452 aaKnown RBP11.75□□□□□ -0.53
USP35-207ENST00000530546 DMTF1Q9Y222 760 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 NUP205Q92621 2012 aa11.75□□□□□ -0.53
USP35-207ENST00000530546 ARHGAP42A6NI28 874 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 B2RBV5 119 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 CAPN15O75808 1086 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 OR6B1O95007 311 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 ALDH1A1P00352 501 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 MX2P20592 715 aa11.74□□□□□ -0.53
USP35-207ENST00000530546 SERPINB6P35237 376 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms