RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 GNLYP22749 145 aa14.21□□□□□ -0.13
NKX3-1-202ENST00000523261 ITGB7P26010 798 aa14.21□□□□□ -0.13
NKX3-1-202ENST00000523261 ATP1A2P50993 1020 aa14.21□□□□□ -0.13
NKX3-1-202ENST00000523261 PLK1P53350 603 aa14.21□□□□□ -0.13
NKX3-1-202ENST00000523261 RAD23BP54727 409 aa14.21□□□□□ -0.13
NKX3-1-202ENST00000523261 DAOAP59103 153 aa14.21□□□□□ -0.13
NKX3-1-202ENST00000523261 CCDC15Q0P6D6 951 aa14.21□□□□□ -0.13
NKX3-1-202ENST00000523261 LACTB2Q53H82 288 aaPredicted RBP14.21□□□□□ -0.13
NKX3-1-202ENST00000523261 LGI2Q8N0V4 545 aa14.21□□□□□ -0.13
NKX3-1-202ENST00000523261 SCML4Q8N228 414 aa14.21□□□□□ -0.13
NKX3-1-202ENST00000523261 TMC2Q8TDI7 906 aa14.21□□□□□ -0.13
NKX3-1-202ENST00000523261 KLF6Q99612 283 aaPredicted RBP14.21□□□□□ -0.13
NKX3-1-202ENST00000523261 IMPG2Q9BZV3 1241 aa14.21□□□□□ -0.13
NKX3-1-202ENST00000523261 TNMDQ9H2S6 317 aa14.21□□□□□ -0.13
NKX3-1-202ENST00000523261 DMAC2Q9NW81 257 aa14.21□□□□□ -0.13
NKX3-1-202ENST00000523261 GULP1Q9UBP9 304 aa14.21□□□□□ -0.13
NKX3-1-202ENST00000523261 CLIC4Q9Y696 253 aa14.21□□□□□ -0.13
NKX3-1-202ENST00000523261 HIVEP3Q5T1R4 2406 aa14.2□□□□□ -0.14
NKX3-1-202ENST00000523261 RNF103O00237 685 aa14.2□□□□□ -0.14
NKX3-1-202ENST00000523261 IKBKBO14920 756 aa14.2□□□□□ -0.14
NKX3-1-202ENST00000523261 BNIP3LO60238 219 aa14.2□□□□□ -0.14
NKX3-1-202ENST00000523261 PRKCGP05129 697 aa14.2□□□□□ -0.14
NKX3-1-202ENST00000523261 TSHRP16473 764 aa14.2□□□□□ -0.14
NKX3-1-202ENST00000523261 KNOP1Q1ED39 458 aaKnown RBP14.2□□□□□ -0.14
NKX3-1-202ENST00000523261 MAMDC2Q7Z304 686 aaPredicted RBP14.2□□□□□ -0.14
NKX3-1-202ENST00000523261 BRAPQ7Z569 592 aa14.2□□□□□ -0.14
NKX3-1-202ENST00000523261 SRRM1Q8IYB3 904 aaKnown RBP14.2□□□□□ -0.14
NKX3-1-202ENST00000523261 PHACTR4Q8IZ21 702 aa14.2□□□□□ -0.14
NKX3-1-202ENST00000523261 SIX6OS1Q8N1H7 587 aa14.2□□□□□ -0.14
NKX3-1-202ENST00000523261 ARL10Q8N8L6 244 aa14.2□□□□□ -0.14
NKX3-1-202ENST00000523261 SLC39A13Q96H72 371 aa14.2□□□□□ -0.14
NKX3-1-202ENST00000523261 CMKLR1Q99788 373 aa14.2□□□□□ -0.14
NKX3-1-202ENST00000523261 CNGB3Q9NQW8 809 aa14.2□□□□□ -0.14
NKX3-1-202ENST00000523261 CUEDC1Q9NWM3 386 aaPredicted RBP14.2□□□□□ -0.14
NKX3-1-202ENST00000523261 XPO7Q9UIA9 1087 aaKnown RBP14.2□□□□□ -0.14
NKX3-1-202ENST00000523261 SLC25A13Q9UJS0 675 aa14.2□□□□□ -0.14
NKX3-1-202ENST00000523261 NAALADL1Q9UQQ1 740 aa14.2□□□□□ -0.14
NKX3-1-202ENST00000523261 ESPL1Q14674 2120 aa14.2□□□□□ -0.14
NKX3-1-202ENST00000523261 VPS4BO75351 444 aa14.19□□□□□ -0.14
NKX3-1-202ENST00000523261 CELA2BP08218 269 aaPredicted RBP14.19□□□□□ -0.14
NKX3-1-202ENST00000523261 CHRNA3P32297 505 aa14.19□□□□□ -0.14
NKX3-1-202ENST00000523261 ARSDP51689 593 aa14.19□□□□□ -0.14
NKX3-1-202ENST00000523261 PFN3P60673 137 aa14.19□□□□□ -0.14
NKX3-1-202ENST00000523261 RPS21P63220 83 aaKnown RBP14.19□□□□□ -0.14
NKX3-1-202ENST00000523261 GOLGA7BQ2TAP0 167 aa14.19□□□□□ -0.14
NKX3-1-202ENST00000523261 TMEM164Q5U3C3 297 aa14.19□□□□□ -0.14
NKX3-1-202ENST00000523261 KIAA1161Q6NSJ0 714 aa14.19□□□□□ -0.14
NKX3-1-202ENST00000523261 ERN2Q76MJ5 926 aaKnown RBP14.19□□□□□ -0.14
NKX3-1-202ENST00000523261 SH2D3CQ8N5H7 860 aa14.19□□□□□ -0.14
NKX3-1-202ENST00000523261 PDILTQ8N807 584 aa14.19□□□□□ -0.14
NKX3-1-202ENST00000523261 GALNT11Q8NCW6 608 aa14.19□□□□□ -0.14
NKX3-1-202ENST00000523261 TMIEQ8NEW7 156 aa14.19□□□□□ -0.14
NKX3-1-202ENST00000523261 GPBAR1Q8TDU6 330 aa14.19□□□□□ -0.14
NKX3-1-202ENST00000523261 TAS1R2Q8TE23 839 aa14.19□□□□□ -0.14
NKX3-1-202ENST00000523261 ALG14Q96F25 216 aa14.19□□□□□ -0.14
NKX3-1-202ENST00000523261 HDAC8Q9BY41 377 aa14.19□□□□□ -0.14
NKX3-1-202ENST00000523261 LRRC27Q9C0I9 530 aa14.19□□□□□ -0.14
NKX3-1-202ENST00000523261 DYRK4Q9NR20 520 aa14.19□□□□□ -0.14
NKX3-1-202ENST00000523261 KBTBD4Q9NVX7 518 aa14.19□□□□□ -0.14
NKX3-1-202ENST00000523261 SIRPGQ9P1W8 387 aa14.19□□□□□ -0.14
NKX3-1-202ENST00000523261 TSPAN16Q9UKR8 245 aa14.19□□□□□ -0.14
NKX3-1-202ENST00000523261 VPS4AQ9UN37 437 aa14.19□□□□□ -0.14
NKX3-1-202ENST00000523261 NF1P21359 2839 aa14.19□□□□□ -0.14
NKX3-1-202ENST00000523261 ZNF891A8MT65 544 aaPredicted RBP14.18□□□□□ -0.14
NKX3-1-202ENST00000523261 FPGTO14772 594 aa14.18□□□□□ -0.14
NKX3-1-202ENST00000523261 GABBR2O75899 941 aa14.18□□□□□ -0.14
NKX3-1-202ENST00000523261 MOCS2O96007 188 aaPredicted RBP14.18□□□□□ -0.14
NKX3-1-202ENST00000523261 TACR2P21452 398 aa14.18□□□□□ -0.14
NKX3-1-202ENST00000523261 BST2Q10589 180 aaKnown RBP14.18□□□□□ -0.14
NKX3-1-202ENST00000523261 RAP1GAP2Q684P5 730 aa14.18□□□□□ -0.14
NKX3-1-202ENST00000523261 CXorf57Q6NSI4 855 aaKnown RBP14.18□□□□□ -0.14
NKX3-1-202ENST00000523261 CNNM4Q6P4Q7 775 aa14.18□□□□□ -0.14
NKX3-1-202ENST00000523261 CHSY1Q86X52 802 aa14.18□□□□□ -0.14
NKX3-1-202ENST00000523261 CCNJLQ8IV13 435 aa14.18□□□□□ -0.14
NKX3-1-202ENST00000523261 SLC9A9Q8IVB4 645 aa14.18□□□□□ -0.14
NKX3-1-202ENST00000523261 SLITRK4Q8IW52 837 aa14.18□□□□□ -0.14
NKX3-1-202ENST00000523261 CCAR2Q8N163 923 aaKnown RBP14.18□□□□□ -0.14
NKX3-1-202ENST00000523261 IL22RA1Q8N6P7 574 aa14.18□□□□□ -0.14
NKX3-1-202ENST00000523261 OR2A12Q8NGT7 310 aa14.18□□□□□ -0.14
NKX3-1-202ENST00000523261 GOLGA5Q8TBA6 731 aa14.18□□□□□ -0.14
NKX3-1-202ENST00000523261 KCTD13Q8WZ19 329 aa14.18□□□□□ -0.14
NKX3-1-202ENST00000523261 LENG8Q96PV6 779 aaPredicted RBP14.18□□□□□ -0.14
NKX3-1-202ENST00000523261 SLC13A1Q9BZW2 595 aa14.18□□□□□ -0.14
NKX3-1-202ENST00000523261 CDH19Q9H159 772 aa14.18□□□□□ -0.14
NKX3-1-202ENST00000523261 CISHQ9NSE2 258 aa14.18□□□□□ -0.14
NKX3-1-202ENST00000523261 TLR6Q9Y2C9 796 aa14.18□□□□□ -0.14
NKX3-1-202ENST00000523261 RNF215Q9Y6U7 377 aa14.18□□□□□ -0.14
NKX3-1-202ENST00000523261 NKX2-8O15522 239 aa14.17□□□□□ -0.14
NKX3-1-202ENST00000523261 CLDN1O95832 211 aa14.17□□□□□ -0.14
NKX3-1-202ENST00000523261 LTFP02788 710 aa14.17□□□□□ -0.14
NKX3-1-202ENST00000523261 LCP1P13796 627 aa14.17□□□□□ -0.14
NKX3-1-202ENST00000523261 RECQLP46063 649 aaPredicted RBP14.17□□□□□ -0.14
NKX3-1-202ENST00000523261 NNTQ13423 1086 aa14.17□□□□□ -0.14
NKX3-1-202ENST00000523261 C16orf72Q14CZ0 275 aa14.17□□□□□ -0.14
NKX3-1-202ENST00000523261 KRTAP21-3Q3LHN1 58 aa14.17□□□□□ -0.14
NKX3-1-202ENST00000523261 TMPRSS9Q7Z410 1059 aa14.17□□□□□ -0.14
NKX3-1-202ENST00000523261 CIR1Q86X95 450 aaPredicted RBP14.17□□□□□ -0.14
NKX3-1-202ENST00000523261 PCDH19Q8TAB3 1148 aa14.17□□□□□ -0.14
NKX3-1-202ENST00000523261 DQX1Q8TE96 717 aaKnown RBP14.17□□□□□ -0.14
NKX3-1-202ENST00000523261 TMEM174Q8WUU8 243 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms