RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 GATA5Q9BWX5 397 aaPredicted RBP4.05□□□□□ -1.76
HDAC2-208ENST00000520746 PLEKHA2Q9HB19 425 aa4.05□□□□□ -1.76
HDAC2-208ENST00000520746 TMLHEQ9NVH6 421 aa4.05□□□□□ -1.76
HDAC2-208ENST00000520746 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.05□□□□□ -1.76
HDAC2-208ENST00000520746 STK26Q9P289 416 aa4.05□□□□□ -1.76
HDAC2-208ENST00000520746 ICKQ9UPZ9 632 aa4.05□□□□□ -1.76
HDAC2-208ENST00000520746 RCE1Q9Y256 329 aa4.05□□□□□ -1.76
HDAC2-208ENST00000520746 LRP6O75581 1613 aa4.05□□□□□ -1.76
HDAC2-208ENST00000520746 ARHGEF5Q12774 1597 aa4.05□□□□□ -1.76
HDAC2-208ENST00000520746 NKTRP30414 1462 aaKnown RBP4.05□□□□□ -1.76
HDAC2-208ENST00000520746 ABCC5O15440 1437 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 ERBINQ96RT1 1412 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 NCOA3Q9Y6Q9 1424 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 UBR1Q8IWV7 1749 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 PIK3C2BO00750 1634 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 SLC22A23A1A5C7 686 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 EME2A4GXA9 379 aaPredicted RBP4.04□□□□□ -1.76
HDAC2-208ENST00000520746 C4orf47A7E2U8 309 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 GRM8O00222 908 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 USP12O75317 370 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 TK1P04183 234 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 CD63P08962 238 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 HSD3B1P14060 373 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 TGM2P21980 687 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 RPS6KB1P23443 525 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 HOXA7P31268 230 aaPredicted RBP4.04□□□□□ -1.76
HDAC2-208ENST00000520746 SOX2P48431 317 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 PAPOLAP51003 745 aaKnown RBP4.04□□□□□ -1.76
HDAC2-208ENST00000520746 RPS13P62277 151 aaKnown RBP4.04□□□□□ -1.76
HDAC2-208ENST00000520746 HSF1Q00613 529 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 STIM1Q13586 685 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 ZNF585BQ52M93 769 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 DEFB132Q7Z7B7 95 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 SMAP1Q8IYB5 467 aaPredicted RBP4.04□□□□□ -1.76
HDAC2-208ENST00000520746 TMEM57Q8N5G2 664 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 PTGR2Q8N8N7 351 aaPredicted RBP4.04□□□□□ -1.76
HDAC2-208ENST00000520746 CEP70Q8NHQ1 597 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 SLC2A12Q8TD20 617 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 KCNJ9Q92806 393 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 GCC1Q96CN9 775 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 COG8Q96MW5 612 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 ZNF347Q96SE7 839 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 SCNM1Q9BWG6 230 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 ARHGAP39Q9C0H5 1083 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 TWSG1Q9GZX9 223 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 SLCO5A1Q9H2Y9 848 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 RMI1Q9H9A7 625 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 MDFICQ9P1T7 246 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 IPO11Q9UI26 975 aaKnown RBP4.04□□□□□ -1.76
HDAC2-208ENST00000520746 DERAQ9Y315 318 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.04□□□□□ -1.76
HDAC2-208ENST00000520746 CEP152O94986 1710 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 DAPK1P53355 1430 aa4.04□□□□□ -1.76
HDAC2-208ENST00000520746 ZC3H13Q5T200 1668 aaKnown RBP4.03□□□□□ -1.76
HDAC2-208ENST00000520746 NUP155O75694 1391 aa4.03□□□□□ -1.76
HDAC2-208ENST00000520746 SEPT4O43236 478 aa4.03□□□□□ -1.76
HDAC2-208ENST00000520746 SGPL1O95470 568 aa4.03□□□□□ -1.76
HDAC2-208ENST00000520746 CHN1P15882 459 aa4.03□□□□□ -1.76
HDAC2-208ENST00000520746 CPA2P48052 419 aa4.03□□□□□ -1.76
HDAC2-208ENST00000520746 MCM2P49736 904 aa4.03□□□□□ -1.76
HDAC2-208ENST00000520746 B4GALNT1Q00973 533 aa4.03□□□□□ -1.76
HDAC2-208ENST00000520746 CDK18Q07002 472 aa4.03□□□□□ -1.76
HDAC2-208ENST00000520746 MTX1Q13505 466 aa4.03□□□□□ -1.76
HDAC2-208ENST00000520746 TAF12Q16514 161 aa4.03□□□□□ -1.76
HDAC2-208ENST00000520746 TMEM95Q3KNT9 176 aa4.03□□□□□ -1.76
HDAC2-208ENST00000520746 SLC9C1Q4G0N8 1177 aa4.03□□□□□ -1.76
HDAC2-208ENST00000520746 EARS2Q5JPH6 523 aaKnown RBP4.03□□□□□ -1.76
HDAC2-208ENST00000520746 FBXO47Q5MNV8 452 aa4.03□□□□□ -1.76
HDAC2-208ENST00000520746 LIPMQ5VYY2 423 aa4.03□□□□□ -1.76
HDAC2-208ENST00000520746 ZNF474Q6S9Z5 364 aaPredicted RBP4.03□□□□□ -1.76
HDAC2-208ENST00000520746 RASGRP2Q7LDG7 609 aa4.03□□□□□ -1.76
HDAC2-208ENST00000520746 HERC6Q8IVU3 1022 aa4.03□□□□□ -1.76
HDAC2-208ENST00000520746 DCP1BQ8IZD4 617 aaKnown RBP4.03□□□□□ -1.76
HDAC2-208ENST00000520746 ADGRF4Q8IZF3 695 aa4.03□□□□□ -1.76
HDAC2-208ENST00000520746 MPLKIPQ8TAP9 179 aa4.03□□□□□ -1.76
HDAC2-208ENST00000520746 PPM1EQ8WY54 764 aa4.03□□□□□ -1.76
HDAC2-208ENST00000520746 KTI12Q96EK9 354 aaPredicted RBP4.03□□□□□ -1.76
HDAC2-208ENST00000520746 ADAD1Q96M93 576 aaKnown RBP4.03□□□□□ -1.76
HDAC2-208ENST00000520746 NPAS1Q99742 590 aa4.03□□□□□ -1.76
HDAC2-208ENST00000520746 PYM1Q9BRP8 204 aaKnown RBP4.03□□□□□ -1.76
HDAC2-208ENST00000520746 CLPBQ9H078 707 aa4.03□□□□□ -1.76
HDAC2-208ENST00000520746 MOV10Q9HCE1 1003 aaKnown RBP4.03□□□□□ -1.76
HDAC2-208ENST00000520746 SLC25A13Q9UJS0 675 aa4.03□□□□□ -1.76
HDAC2-208ENST00000520746 SLC8A2Q9UPR5 921 aa4.03□□□□□ -1.76
HDAC2-208ENST00000520746 RRP7AQ9Y3A4 280 aaKnown RBP4.03□□□□□ -1.76
HDAC2-208ENST00000520746 CDK12Q9NYV4 1490 aaPredicted RBP4.03□□□□□ -1.76
HDAC2-208ENST00000520746 TET3O43151 1660 aa4.03□□□□□ -1.76
HDAC2-208ENST00000520746 RGS12O14924 1447 aa4.03□□□□□ -1.76
HDAC2-208ENST00000520746 VPS8Q8N3P4 1428 aa4.03□□□□□ -1.76
HDAC2-208ENST00000520746 ANKRD50Q9ULJ7 1429 aa4.03□□□□□ -1.76
HDAC2-208ENST00000520746 PNPLA6Q8IY17 1366 aa4.02□□□□□ -1.77
HDAC2-208ENST00000520746 PIK3R4Q99570 1358 aa4.02□□□□□ -1.77
HDAC2-208ENST00000520746 NPHP3Q7Z494 1330 aa4.02□□□□□ -1.77
HDAC2-208ENST00000520746 MAP3K1Q13233 1512 aa4.02□□□□□ -1.77
HDAC2-208ENST00000520746 C2CD4BA6NLJ0 364 aa4.02□□□□□ -1.77
HDAC2-208ENST00000520746 STX16-NPEPL1H3BU86 382 aa4.02□□□□□ -1.77
HDAC2-208ENST00000520746 EIF3FO00303 357 aaPredicted RBP4.02□□□□□ -1.77
HDAC2-208ENST00000520746 STX16O14662 325 aa4.02□□□□□ -1.77
HDAC2-208ENST00000520746 LYL1P12980 280 aa4.02□□□□□ -1.77
HDAC2-208ENST00000520746 TFEBP19484 476 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms