RNA–Protein interactions for RNA: ENST00000469522.1

SNU13-207, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 2

Gene SNU13, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-207ENST00000469522 KLHL40Q2TBA0 621 aa11.96□□□□□ -0.49
SNU13-207ENST00000469522 C6orf118Q5T5N4 469 aa11.96□□□□□ -0.49
SNU13-207ENST00000469522 ACAD10Q6JQN1 1059 aa11.96□□□□□ -0.49
SNU13-207ENST00000469522 ZNF783Q6ZMS7 281 aa11.96□□□□□ -0.49
SNU13-207ENST00000469522 DPY19L3Q6ZPD9 716 aa11.96□□□□□ -0.49
SNU13-207ENST00000469522 CYP4V2Q6ZWL3 525 aaPredicted RBP11.96□□□□□ -0.49
SNU13-207ENST00000469522 ZNF571Q7Z3V5 609 aaPredicted RBP11.96□□□□□ -0.49
SNU13-207ENST00000469522 SLCO6A1Q86UG4 719 aa11.96□□□□□ -0.49
SNU13-207ENST00000469522 ATP11CQ8NB49 1132 aa11.96□□□□□ -0.49
SNU13-207ENST00000469522 GATA6Q92908 595 aa11.96□□□□□ -0.49
SNU13-207ENST00000469522 ARHGEF2Q92974 986 aaKnown RBP11.96□□□□□ -0.49
SNU13-207ENST00000469522 MCEEQ96PE7 176 aa11.96□□□□□ -0.49
SNU13-207ENST00000469522 SELENOOQ9BVL4 669 aa11.96□□□□□ -0.49
SNU13-207ENST00000469522 SCNM1Q9BWG6 230 aa11.96□□□□□ -0.49
SNU13-207ENST00000469522 KLC2Q9H0B6 622 aa11.96□□□□□ -0.49
SNU13-207ENST00000469522 SLC32A1Q9H598 525 aa11.96□□□□□ -0.49
SNU13-207ENST00000469522 RETREG1Q9H6L5 497 aa11.96□□□□□ -0.49
SNU13-207ENST00000469522 CBX8Q9HC52 389 aa11.96□□□□□ -0.49
SNU13-207ENST00000469522 TMEM248Q9NWD8 314 aa11.96□□□□□ -0.49
SNU13-207ENST00000469522 DNAI1Q9UI46 699 aa11.96□□□□□ -0.49
SNU13-207ENST00000469522 KLK13Q9UKR3 277 aa11.96□□□□□ -0.49
SNU13-207ENST00000469522 TPX2Q9ULW0 747 aaKnown RBP11.96□□□□□ -0.49
SNU13-207ENST00000469522 FCF1Q9Y324 198 aaKnown RBP11.96□□□□□ -0.49
SNU13-207ENST00000469522 FARP1Q9Y4F1 1045 aaPredicted RBP11.96□□□□□ -0.49
SNU13-207ENST00000469522 COL5A1P20908 1838 aaPredicted RBP11.95□□□□□ -0.5
SNU13-207ENST00000469522 PKD1L2Q7Z442 2459 aa11.95□□□□□ -0.5
SNU13-207ENST00000469522 LRRK1Q38SD2 2015 aa11.95□□□□□ -0.5
SNU13-207ENST00000469522 A0A1W2PQC6 194 aa11.95□□□□□ -0.5
SNU13-207ENST00000469522 SYCE3A1L190 88 aa11.95□□□□□ -0.5
SNU13-207ENST00000469522 LRRC72A6NJI9 287 aa11.95□□□□□ -0.5
SNU13-207ENST00000469522 CBX4O00257 560 aa11.95□□□□□ -0.5
SNU13-207ENST00000469522 DDX3XO00571 662 aaKnown RBP eCLIP11.95□□□□□ -0.52e-27■■■■□ 26
SNU13-207ENST00000469522 VILLO15195 856 aa11.95□□□□□ -0.5
SNU13-207ENST00000469522 DKK1O94907 266 aa11.95□□□□□ -0.5
SNU13-207ENST00000469522 CER1O95813 267 aa11.95□□□□□ -0.5
SNU13-207ENST00000469522 RHOQP17081 205 aa11.95□□□□□ -0.5
SNU13-207ENST00000469522 CHRNA3P32297 505 aa11.95□□□□□ -0.5
SNU13-207ENST00000469522 PRKCIP41743 596 aa11.95□□□□□ -0.5
SNU13-207ENST00000469522 ZNF143P52747 638 aaPredicted RBP11.95□□□□□ -0.5
SNU13-207ENST00000469522 IL9RQ01113 521 aa11.95□□□□□ -0.5
SNU13-207ENST00000469522 TEAD4Q15561 434 aa11.95□□□□□ -0.5
SNU13-207ENST00000469522 TRIP6Q15654 476 aaKnown RBP11.95□□□□□ -0.5
SNU13-207ENST00000469522 FAM46CQ5VWP2 391 aa11.95□□□□□ -0.5
SNU13-207ENST00000469522 DNAJC24Q6P3W2 148 aa11.95□□□□□ -0.5
SNU13-207ENST00000469522 IL27RAQ6UWB1 636 aa11.95□□□□□ -0.5
SNU13-207ENST00000469522 RAB44Q7Z6P3 723 aaPredicted RBP11.95□□□□□ -0.5
SNU13-207ENST00000469522 SPATS2Q86XZ4 545 aaKnown RBP11.95□□□□□ -0.5
SNU13-207ENST00000469522 PNPLA1Q8N8W4 532 aa11.95□□□□□ -0.5
SNU13-207ENST00000469522 CCDC114Q96M63 670 aa11.95□□□□□ -0.5
SNU13-207ENST00000469522 PEBP4Q96S96 227 aa11.95□□□□□ -0.5
SNU13-207ENST00000469522 SPON2Q9BUD6 331 aa11.95□□□□□ -0.5
SNU13-207ENST00000469522 HAUS4Q9H6D7 363 aa11.95□□□□□ -0.5
SNU13-207ENST00000469522 ATP13A1Q9HD20 1204 aa11.95□□□□□ -0.5
SNU13-207ENST00000469522 AIPL1Q9NZN9 384 aa11.95□□□□□ -0.5
SNU13-207ENST00000469522 FZD10Q9ULW2 581 aa11.95□□□□□ -0.5
SNU13-207ENST00000469522 CA5BQ9Y2D0 317 aa11.95□□□□□ -0.5
SNU13-207ENST00000469522 TMCO5BA8MYB1 307 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 SLC7A4O43246 635 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 SPINT1O43278 529 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 LEFTY1O75610 366 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 KRT37O76014 449 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 SERPINC1P01008 464 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 FTH1P19P0C7X4 201 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 TNFAIP3P21580 790 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 MAT2AP31153 395 aaKnown RBP11.94□□□□□ -0.5
SNU13-207ENST00000469522 GKP32189 559 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 ETFBP38117 255 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 CLCN6P51797 869 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 CCDC15Q0P6D6 951 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 MAMLD1Q13495 774 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 HNRNPDQ14103 355 aaKnown RBP11.94□□□□□ -0.5
SNU13-207ENST00000469522 CA9Q16790 459 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 ARSIQ5FYB1 569 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 HGSNATQ68CP4 663 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 PLEKHA7Q6IQ23 1121 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 LEKR1Q6ZMV7 388 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 KANSL1Q7Z3B3 1105 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 GLRX5Q86SX6 157 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 LUZP1Q86V48 1076 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 TRIM69Q86WT6 500 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 CHCHD4Q8N4Q1 142 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 NETO2Q8NC67 525 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 TMIEQ8NEW7 156 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 GRIN3AQ8TCU5 1115 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 TBC1D31Q96DN5 1066 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 VCPIP1Q96JH7 1222 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 CNPY3Q9BT09 278 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 EDEM3Q9BZQ6 932 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 KDM4CQ9H3R0 1056 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 GPATCH2LQ9NWQ4 482 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 ZFR2Q9UPR6 939 aaKnown RBP11.94□□□□□ -0.5
SNU13-207ENST00000469522 PCDHGB2Q9Y5G2 931 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 ANKRD11Q6UB99 2663 aaPredicted RBP11.94□□□□□ -0.5
SNU13-207ENST00000469522 ITPR1Q14643 2758 aa11.94□□□□□ -0.5
SNU13-207ENST00000469522 NBEAQ8NFP9 2946 aa11.93□□□□□ -0.5
SNU13-207ENST00000469522 TDRD6O60522 2096 aaKnown RBP11.93□□□□□ -0.5
SNU13-207ENST00000469522 TBC1D3DA0A087WVF3 549 aa11.93□□□□□ -0.5
SNU13-207ENST00000469522 TBC1D3IA0A087WXS9 549 aa11.93□□□□□ -0.5
SNU13-207ENST00000469522 TBC1D3EA0A087X179 549 aa11.93□□□□□ -0.5
SNU13-207ENST00000469522 TBC1D3KA0A087X1G2 549 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms