RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 DCAF12L1Q5VU92 463 aa13.16□□□□□ -0.3
COL5A1-206ENST00000465877 TXNRD3NBQ6F5E7 133 aa13.16□□□□□ -0.3
COL5A1-206ENST00000465877 CPNE8Q86YQ8 564 aa13.16□□□□□ -0.3
COL5A1-206ENST00000465877 RGL4Q8IZJ4 473 aa13.16□□□□□ -0.3
COL5A1-206ENST00000465877 HDDC3Q8N4P3 179 aa13.16□□□□□ -0.3
COL5A1-206ENST00000465877 PCDH20Q8N6Y1 951 aaKnown RBP13.16□□□□□ -0.3
COL5A1-206ENST00000465877 PIP4K2CQ8TBX8 421 aa13.16□□□□□ -0.3
COL5A1-206ENST00000465877 GRIN3AQ8TCU5 1115 aa13.16□□□□□ -0.3
COL5A1-206ENST00000465877 GANCQ8TET4 914 aa13.16□□□□□ -0.3
COL5A1-206ENST00000465877 RFFLQ8WZ73 363 aa13.16□□□□□ -0.3
COL5A1-206ENST00000465877 OMDQ99983 421 aa13.16□□□□□ -0.3
COL5A1-206ENST00000465877 EDEM2Q9BV94 578 aa13.16□□□□□ -0.3
COL5A1-206ENST00000465877 PCED1AQ9H1Q7 454 aa13.16□□□□□ -0.3
COL5A1-206ENST00000465877 C6orf106Q9H6K1 298 aaPredicted RBP13.16□□□□□ -0.3
COL5A1-206ENST00000465877 LRRC19Q9H756 370 aa13.16□□□□□ -0.3
COL5A1-206ENST00000465877 DONSONQ9NYP3 566 aa13.16□□□□□ -0.3
COL5A1-206ENST00000465877 EVLQ9UI08 416 aaPredicted RBP13.16□□□□□ -0.3
COL5A1-206ENST00000465877 LCMT1Q9UIC8 334 aa13.16□□□□□ -0.3
COL5A1-206ENST00000465877 CACNA1AO00555 2505 aa13.15□□□□□ -0.3
COL5A1-206ENST00000465877 LRRK1Q38SD2 2015 aa13.15□□□□□ -0.3
COL5A1-206ENST00000465877 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.15□□□□□ -0.3
COL5A1-206ENST00000465877 PRR5-ARHGAP8B1AHC4 643 aa13.15□□□□□ -0.3
COL5A1-206ENST00000465877 DAPK3O43293 454 aa13.15□□□□□ -0.3
COL5A1-206ENST00000465877 KDELR3O43731 214 aa13.15□□□□□ -0.3
COL5A1-206ENST00000465877 GDF9O60383 454 aa13.15□□□□□ -0.3
COL5A1-206ENST00000465877 TMCC1O94876 653 aa13.15□□□□□ -0.3
COL5A1-206ENST00000465877 RARAP10276 462 aa13.15□□□□□ -0.3
COL5A1-206ENST00000465877 ERCC2P18074 760 aa13.15□□□□□ -0.3
COL5A1-206ENST00000465877 MAN1A1P33908 653 aa13.15□□□□□ -0.3
COL5A1-206ENST00000465877 GJC1P36383 396 aa13.15□□□□□ -0.3
COL5A1-206ENST00000465877 ARL4AP40617 200 aa13.15□□□□□ -0.3
COL5A1-206ENST00000465877 RECQLP46063 649 aaPredicted RBP13.15□□□□□ -0.3
COL5A1-206ENST00000465877 NDST2P52849 883 aa13.15□□□□□ -0.3
COL5A1-206ENST00000465877 ARHGAP8P85298 464 aa13.15□□□□□ -0.3
COL5A1-206ENST00000465877 SLC20A2Q08357 652 aa13.15□□□□□ -0.3
COL5A1-206ENST00000465877 POM121L1PQ3SYA9 428 aa13.15□□□□□ -0.3
COL5A1-206ENST00000465877 BOLA3Q53S33 107 aa13.15□□□□□ -0.3
COL5A1-206ENST00000465877 TRIM61Q5EBN2 209 aa13.15□□□□□ -0.3
COL5A1-206ENST00000465877 WDR45BQ5MNZ6 344 aa13.15□□□□□ -0.3
COL5A1-206ENST00000465877 FAM46CQ5VWP2 391 aa13.15□□□□□ -0.3
COL5A1-206ENST00000465877 LEKR1Q6ZMV7 388 aa13.15□□□□□ -0.3
COL5A1-206ENST00000465877 RABEPKQ7Z6M1 372 aa13.15□□□□□ -0.3
COL5A1-206ENST00000465877 ZCCHC9Q8N567 271 aaKnown RBP13.15□□□□□ -0.3
COL5A1-206ENST00000465877 NPWQ8N729 165 aa13.15□□□□□ -0.3
COL5A1-206ENST00000465877 CHST14Q8NCH0 376 aa13.15□□□□□ -0.3
COL5A1-206ENST00000465877 NETO1Q8TDF5 533 aa13.15□□□□□ -0.3
COL5A1-206ENST00000465877 SNX19Q92543 992 aa13.15□□□□□ -0.3
COL5A1-206ENST00000465877 FAM131CQ96AQ9 280 aa13.15□□□□□ -0.3
COL5A1-206ENST00000465877 CELF6Q96J87 481 aaKnown RBP13.15□□□□□ -0.3
COL5A1-206ENST00000465877 TM6SF2Q9BZW4 377 aa13.15□□□□□ -0.3
COL5A1-206ENST00000465877 KLC2Q9H0B6 622 aa13.15□□□□□ -0.3
COL5A1-206ENST00000465877 RXFP3Q9NSD7 469 aa13.15□□□□□ -0.3
COL5A1-206ENST00000465877 CWC15Q9P013 229 aaKnown RBP13.15□□□□□ -0.3
COL5A1-206ENST00000465877 SUSD2Q9UGT4 822 aa13.15□□□□□ -0.3
COL5A1-206ENST00000465877 CDV3Q9UKY7 258 aaKnown RBP13.15□□□□□ -0.3
COL5A1-206ENST00000465877 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.15□□□□□ -0.3
COL5A1-206ENST00000465877 FARP1Q9Y4F1 1045 aaPredicted RBP13.15□□□□□ -0.3
COL5A1-206ENST00000465877 TMEM110-MUSTN1A8MSY1 372 aa13.14□□□□□ -0.31
COL5A1-206ENST00000465877 PLK4O00444 970 aa13.14□□□□□ -0.31
COL5A1-206ENST00000465877 KPNA3O00505 521 aaPredicted RBP13.14□□□□□ -0.31
COL5A1-206ENST00000465877 KHNYNO15037 678 aaKnown RBP13.14□□□□□ -0.31
COL5A1-206ENST00000465877 MTA2O94776 668 aa13.14□□□□□ -0.31
COL5A1-206ENST00000465877 PRNPP04156 253 aa13.14□□□□□ -0.31
COL5A1-206ENST00000465877 CFIP05156 583 aa13.14□□□□□ -0.31
COL5A1-206ENST00000465877 CHRNA3P32297 505 aa13.14□□□□□ -0.31
COL5A1-206ENST00000465877 SSR1P43307 286 aaKnown RBP13.14□□□□□ -0.31
COL5A1-206ENST00000465877 HCAR3P49019 387 aa13.14□□□□□ -0.31
COL5A1-206ENST00000465877 CCNHP51946 323 aaPredicted RBP13.14□□□□□ -0.31
COL5A1-206ENST00000465877 CNTN1Q12860 1018 aa13.14□□□□□ -0.31
COL5A1-206ENST00000465877 SERINC3Q13530 473 aa13.14□□□□□ -0.31
COL5A1-206ENST00000465877 KRT81Q14533 505 aa13.14□□□□□ -0.31
COL5A1-206ENST00000465877 HADHQ16836 314 aaKnown RBP13.14□□□□□ -0.31
COL5A1-206ENST00000465877 AGBL4Q5VU57 503 aa13.14□□□□□ -0.31
COL5A1-206ENST00000465877 DPY19L3Q6ZPD9 716 aa13.14□□□□□ -0.31
COL5A1-206ENST00000465877 ARHGAP12Q8IWW6 846 aa13.14□□□□□ -0.31
COL5A1-206ENST00000465877 RHOT2Q8IXI1 618 aa13.14□□□□□ -0.31
COL5A1-206ENST00000465877 SLC35G2Q8TBE7 412 aa13.14□□□□□ -0.31
COL5A1-206ENST00000465877 DNASE2BQ8WZ79 361 aa13.14□□□□□ -0.31
COL5A1-206ENST00000465877 ISG20Q96AZ6 181 aaKnown RBP13.14□□□□□ -0.31
COL5A1-206ENST00000465877 RMDN1Q96DB5 314 aa13.14□□□□□ -0.31
COL5A1-206ENST00000465877 CSPG4P5Q96PW8 444 aa13.14□□□□□ -0.31
COL5A1-206ENST00000465877 PANX2Q96RD6 677 aa13.14□□□□□ -0.31
COL5A1-206ENST00000465877 NEUROG2Q9H2A3 272 aa13.14□□□□□ -0.31
COL5A1-206ENST00000465877 ZDHHC6Q9H6R6 413 aa13.14□□□□□ -0.31
COL5A1-206ENST00000465877 PDFQ9HBH1 243 aa13.14□□□□□ -0.31
COL5A1-206ENST00000465877 PCDH18Q9HCL0 1135 aa13.14□□□□□ -0.31
COL5A1-206ENST00000465877 KLHL11Q9NVR0 708 aa13.14□□□□□ -0.31
COL5A1-206ENST00000465877 IL36AQ9UHA7 158 aa13.14□□□□□ -0.31
COL5A1-206ENST00000465877 INTUQ9ULD6 942 aa13.14□□□□□ -0.31
COL5A1-206ENST00000465877 PPM1HQ9ULR3 514 aa13.14□□□□□ -0.31
COL5A1-206ENST00000465877 MFHAS1Q9Y4C4 1052 aa13.14□□□□□ -0.31
COL5A1-206ENST00000465877 WASF2Q9Y6W5 498 aa13.14□□□□□ -0.31
COL5A1-206ENST00000465877 FAM47DPA6NHR8 397 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 ARHGAP42A6NI28 874 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 LRRC72A6NJI9 287 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 METTL12A8MUP2 240 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 SLC7A4O43246 635 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 PLRG1O43660 514 aaKnown RBP13.13□□□□□ -0.31
COL5A1-206ENST00000465877 BUB1O43683 1085 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 FSBPO95073 299 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms