RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 LEFTY2O00292 366 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 GFRA2O00451 464 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 CLDN11O75508 207 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 IRF1P10914 325 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 GJA1P17302 382 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 ITIH2P19823 946 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 IVDP26440 423 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 SLC6A4P31645 630 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 CNR2P34972 360 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 ACTN2P35609 894 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 CHKAP35790 457 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 SOX9P48436 509 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 NOVA1P51513 510 aaKnown RBP11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 CDH4P55283 916 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 YBEYP58557 167 aaPredicted RBP11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 CAV1Q03135 178 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 USP4Q13107 963 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 P3H1Q32P28 736 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 STXBP5Q5T5C0 1151 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 TCEAL6Q6IPX3 200 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 VITQ6UXI7 678 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 ARHGAP12Q8IWW6 846 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 KDF1Q8NAX2 398 aaPredicted RBP11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 TTC8Q8TAM2 541 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 HTR3CQ8WXA8 447 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 CASKIN2Q8WXE0 1202 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 IRF7Q92985 503 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 TCEAL3Q969E4 200 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 IGSF8Q969P0 613 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 LRRC45Q96CN5 670 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 ZSWIM3Q96MP5 696 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 VAT1Q99536 393 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 ZFP14Q9HCL3 533 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 TDP1Q9NUW8 608 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 PAK5Q9P286 719 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 CFAP97Q9P2B7 532 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 LHX6Q9UPM6 363 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 SH3BP1Q9Y3L3 701 aa11.99□□□□□ -0.49
AC009404.1-202ENST00000439955 GOLGA6L7A0A1B0GV03 622 aa11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 A0A1B0GVM2 712 aa11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 ESYT3A0FGR9 886 aa11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 TYW5A2RUC4 315 aaKnown RBP11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 TCAF2A6NFQ2 919 aa11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 C5orf60A6NFR6 353 aa11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 KCNN4O15554 427 aa11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 GCATO75600 419 aa11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 STK10O94804 968 aaKnown RBP11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 ZIC2O95409 532 aaPredicted RBP11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 ZNF806P0C7X5 589 aa11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 CCNCP24863 283 aa11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 RBL1P28749 1068 aa11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 RPL21P46778 160 aaKnown RBP11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 GDF10P55107 478 aa11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 ZXDBP98169 803 aa11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 CALCOCO2Q13137 446 aa11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 PARP15Q460N3 678 aa11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 MPP7Q5T2T1 576 aa11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 TIGD7Q6NT04 549 aaPredicted RBP11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 EMBQ6PCB8 327 aa11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 PCGF5Q86SE9 256 aa11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 KBTBD6Q86V97 674 aa11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 ATPAF2Q8N5M1 289 aa11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 FAM71DQ8N9W8 422 aa11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 HJURPQ8NCD3 748 aaPredicted RBP11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 USP13Q92995 863 aaPredicted RBP11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 WBP2Q969T9 261 aa11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 OTUB2Q96DC9 234 aa11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 PRICKLE1Q96MT3 831 aaPredicted RBP11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 ASB16Q96NS5 453 aa11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 TMEM121BQ9BXQ6 578 aaPredicted RBP11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 DPH5Q9H2P9 285 aa11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 GRHL1Q9NZI5 618 aa11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 MPP6Q9NZW5 540 aa11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 TBC1D14Q9P2M4 693 aa11.98□□□□□ -0.49
AC009404.1-202ENST00000439955 PKD1L2Q7Z442 2459 aa11.97□□□□□ -0.49
AC009404.1-202ENST00000439955 ARHGAP42A6NI28 874 aa11.97□□□□□ -0.49
AC009404.1-202ENST00000439955 DNALI1O14645 258 aaPredicted RBP11.97□□□□□ -0.49
AC009404.1-202ENST00000439955 OPHN1O60890 802 aa11.97□□□□□ -0.49
AC009404.1-202ENST00000439955 RAMP2O60895 175 aa11.97□□□□□ -0.49
AC009404.1-202ENST00000439955 CNTN5O94779 1100 aa11.97□□□□□ -0.49
AC009404.1-202ENST00000439955 SEC31AO94979 1220 aaKnown RBP11.97□□□□□ -0.49
AC009404.1-202ENST00000439955 IFNB1P01574 187 aa11.97□□□□□ -0.49
AC009404.1-202ENST00000439955 VAV1P15498 845 aa11.97□□□□□ -0.49
AC009404.1-202ENST00000439955 PSMC3P17980 439 aa11.97□□□□□ -0.49
AC009404.1-202ENST00000439955 ECHS1P30084 290 aa11.97□□□□□ -0.49
AC009404.1-202ENST00000439955 OR1E1P30953 314 aa11.97□□□□□ -0.49
AC009404.1-202ENST00000439955 ETFBP38117 255 aa11.97□□□□□ -0.49
AC009404.1-202ENST00000439955 ADCY8P40145 1251 aa11.97□□□□□ -0.49
AC009404.1-202ENST00000439955 CARSP49589 748 aaKnown RBP11.97□□□□□ -0.49
AC009404.1-202ENST00000439955 IRAK1P51617 712 aa11.97□□□□□ -0.49
AC009404.1-202ENST00000439955 AP1B1Q10567 949 aa11.97□□□□□ -0.49
AC009404.1-202ENST00000439955 HLTFQ14527 1009 aaKnown RBP eCLIP11.97□□□□□ -0.49
AC009404.1-202ENST00000439955 ZNF77Q15935 545 aa11.97□□□□□ -0.49
AC009404.1-202ENST00000439955 ALFQ53S48 1182 aa11.97□□□□□ -0.49
AC009404.1-202ENST00000439955 RNF43Q68DV7 783 aa11.97□□□□□ -0.49
AC009404.1-202ENST00000439955 RFWD3Q6PCD5 774 aa11.97□□□□□ -0.49
AC009404.1-202ENST00000439955 FBXO38Q6PIJ6 1188 aa11.97□□□□□ -0.49
AC009404.1-202ENST00000439955 ZNF783Q6ZMS7 281 aa11.97□□□□□ -0.49
AC009404.1-202ENST00000439955 TFAP2DQ7Z6R9 452 aa11.97□□□□□ -0.49
AC009404.1-202ENST00000439955 SETD3Q86TU7 594 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms