RNA–Protein interactions for RNA: ENST00000419334.1

EPCAM-203, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-203ENST00000419334 PDFQ9HBH1 243 aa17.99■□□□□ 0.47
EPCAM-203ENST00000419334 FCF1Q9Y324 198 aaKnown RBP17.99■□□□□ 0.47
EPCAM-203ENST00000419334 FARP1Q9Y4F1 1045 aaPredicted RBP17.99■□□□□ 0.47
EPCAM-203ENST00000419334 TNRC6BQ9UPQ9 1833 aaKnown RBP17.98■□□□□ 0.47
EPCAM-203ENST00000419334 C3orf70A6NLC5 250 aaPredicted RBP17.98■□□□□ 0.47
EPCAM-203ENST00000419334 DFFAO00273 331 aa17.98■□□□□ 0.47
EPCAM-203ENST00000419334 NRDCO43847 1150 aa17.98■□□□□ 0.47
EPCAM-203ENST00000419334 RHOBTB1O94844 696 aa17.98■□□□□ 0.47
EPCAM-203ENST00000419334 ADH1BP00325 375 aa17.98■□□□□ 0.47
EPCAM-203ENST00000419334 KRT1P04264 644 aa17.98■□□□□ 0.47
EPCAM-203ENST00000419334 CD6P30203 668 aa17.98■□□□□ 0.47
EPCAM-203ENST00000419334 OXTRP30559 389 aa17.98■□□□□ 0.47
EPCAM-203ENST00000419334 RECQLP46063 649 aaPredicted RBP17.98■□□□□ 0.47
EPCAM-203ENST00000419334 NAP1L1P55209 391 aaKnown RBP17.98■□□□□ 0.47
EPCAM-203ENST00000419334 PAFAH1B3Q15102 231 aaKnown RBP17.98■□□□□ 0.47
EPCAM-203ENST00000419334 ELF2Q15723 593 aa17.98■□□□□ 0.47
EPCAM-203ENST00000419334 LPAL2Q16609 132 aa17.98■□□□□ 0.47
EPCAM-203ENST00000419334 IFI16Q16666 785 aaKnown RBP17.98■□□□□ 0.47
EPCAM-203ENST00000419334 SPDYCQ5MJ68 293 aa17.98■□□□□ 0.47
EPCAM-203ENST00000419334 NCBP2-AS2Q69YL0 99 aa17.98■□□□□ 0.47
EPCAM-203ENST00000419334 LEKR1Q6ZMV7 388 aa17.98■□□□□ 0.47
EPCAM-203ENST00000419334 USP30Q70CQ3 517 aa17.98■□□□□ 0.47
EPCAM-203ENST00000419334 ASCL5Q7RTU5 278 aa17.98■□□□□ 0.47
EPCAM-203ENST00000419334 PLPP6Q8IY26 295 aa17.98■□□□□ 0.47
EPCAM-203ENST00000419334 LOXL4Q96JB6 756 aa17.98■□□□□ 0.47
EPCAM-203ENST00000419334 TNKS2Q9H2K2 1166 aa17.98■□□□□ 0.47
EPCAM-203ENST00000419334 WSB2Q9NYS7 404 aaPredicted RBP17.98■□□□□ 0.47
EPCAM-203ENST00000419334 UBA2Q9UBT2 640 aaPredicted RBP17.98■□□□□ 0.47
EPCAM-203ENST00000419334 PPM1HQ9ULR3 514 aa17.98■□□□□ 0.47
EPCAM-203ENST00000419334 SHROOM3Q8TF72 1996 aa17.98■□□□□ 0.47
EPCAM-203ENST00000419334 DMDP11532 3685 aa17.98■□□□□ 0.47
EPCAM-203ENST00000419334 OTOGLQ3ZCN5 2332 aa17.97■□□□□ 0.47
EPCAM-203ENST00000419334 A0A0U1RQJ8 604 aa17.97■□□□□ 0.47
EPCAM-203ENST00000419334 J3KR12 359 aa17.97■□□□□ 0.47
EPCAM-203ENST00000419334 MID1O15344 667 aa17.97■□□□□ 0.47
EPCAM-203ENST00000419334 MAP3K13O43283 966 aa17.97■□□□□ 0.47
EPCAM-203ENST00000419334 BNIP3LO60238 219 aa17.97■□□□□ 0.47
EPCAM-203ENST00000419334 TMCC1O94876 653 aa17.97■□□□□ 0.47
EPCAM-203ENST00000419334 GSRP00390 522 aa17.97■□□□□ 0.47
EPCAM-203ENST00000419334 IL1BP01584 269 aa17.97■□□□□ 0.47
EPCAM-203ENST00000419334 TNNT1P13805 278 aa17.97■□□□□ 0.47
EPCAM-203ENST00000419334 C5AR1P21730 350 aa17.97■□□□□ 0.47
EPCAM-203ENST00000419334 SLC8A1P32418 973 aa17.97■□□□□ 0.47
EPCAM-203ENST00000419334 PSMD8P48556 350 aa17.97■□□□□ 0.47
EPCAM-203ENST00000419334 IL10RBQ08334 325 aa17.97■□□□□ 0.47
EPCAM-203ENST00000419334 SFSWAPQ12872 951 aaKnown RBP17.97■□□□□ 0.47
EPCAM-203ENST00000419334 CARD16Q5EG05 197 aa17.97■□□□□ 0.47
EPCAM-203ENST00000419334 FAM46CQ5VWP2 391 aa17.97■□□□□ 0.47
EPCAM-203ENST00000419334 DPY19L3Q6ZPD9 716 aa17.97■□□□□ 0.47
EPCAM-203ENST00000419334 LPCAT2Q7L5N7 544 aa17.97■□□□□ 0.47
EPCAM-203ENST00000419334 TP53INP2Q8IXH6 220 aa17.97■□□□□ 0.47
EPCAM-203ENST00000419334 PQLC3Q8N755 202 aa17.97■□□□□ 0.47
EPCAM-203ENST00000419334 NETO2Q8NC67 525 aa17.97■□□□□ 0.47
EPCAM-203ENST00000419334 ANP32BQ92688 251 aaKnown RBP17.97■□□□□ 0.47
EPCAM-203ENST00000419334 RNF157Q96PX1 679 aa17.97■□□□□ 0.47
EPCAM-203ENST00000419334 SP110Q9HB58 689 aa17.97■□□□□ 0.47
EPCAM-203ENST00000419334 TRIM10Q9UDY6 481 aa17.97■□□□□ 0.47
EPCAM-203ENST00000419334 SDK1Q7Z5N4 2213 aa17.96■□□□□ 0.47
EPCAM-203ENST00000419334 NUMA1Q14980 2115 aa17.96■□□□□ 0.47
EPCAM-203ENST00000419334 GPR179Q6PRD1 2367 aa17.96■□□□□ 0.47
EPCAM-203ENST00000419334 USP34Q70CQ2 3546 aa17.96■□□□□ 0.47
EPCAM-203ENST00000419334 GRID2IPA4D2P6 1211 aa17.96■□□□□ 0.47
EPCAM-203ENST00000419334 C1QTNF3-AMACRE9PGA6 284 aa17.96■□□□□ 0.47
EPCAM-203ENST00000419334 MFSD11O43934 449 aa17.96■□□□□ 0.47
EPCAM-203ENST00000419334 CTSLP07711 333 aa17.96■□□□□ 0.47
EPCAM-203ENST00000419334 CHRNA3P32297 505 aa17.96■□□□□ 0.47
EPCAM-203ENST00000419334 SNRPD1P62314 119 aaKnown RBP17.96■□□□□ 0.47
EPCAM-203ENST00000419334 RPL6Q02878 288 aaKnown RBP17.96■□□□□ 0.47
EPCAM-203ENST00000419334 ODF2Q5BJF6 829 aa17.96■□□□□ 0.47
EPCAM-203ENST00000419334 ARHGAP36Q6ZRI8 547 aa17.96■□□□□ 0.47
EPCAM-203ENST00000419334 LRRC49Q8IUZ0 686 aa17.96■□□□□ 0.47
EPCAM-203ENST00000419334 KATNAL2Q8IYT4 538 aa17.96■□□□□ 0.47
EPCAM-203ENST00000419334 LRRC57Q8N9N7 239 aa17.96■□□□□ 0.47
EPCAM-203ENST00000419334 TMIEQ8NEW7 156 aa17.96■□□□□ 0.47
EPCAM-203ENST00000419334 OR2AP1Q8NGE2 309 aa17.96■□□□□ 0.47
EPCAM-203ENST00000419334 PIP4K2CQ8TBX8 421 aa17.96■□□□□ 0.47
EPCAM-203ENST00000419334 KIAA1524Q8TCG1 905 aa17.96■□□□□ 0.47
EPCAM-203ENST00000419334 TOE1Q96GM8 510 aaKnown RBP17.96■□□□□ 0.47
EPCAM-203ENST00000419334 TM6SF2Q9BZW4 377 aa17.96■□□□□ 0.47
EPCAM-203ENST00000419334 TSGA10Q9BZW7 698 aa17.96■□□□□ 0.47
EPCAM-203ENST00000419334 FBXL12Q9NXK8 326 aa17.96■□□□□ 0.47
EPCAM-203ENST00000419334 IL36AQ9UHA7 158 aa17.96■□□□□ 0.47
EPCAM-203ENST00000419334 IPO11Q9UI26 975 aaKnown RBP17.96■□□□□ 0.47
EPCAM-203ENST00000419334 SARDHQ9UL12 918 aa17.96■□□□□ 0.47
EPCAM-203ENST00000419334 FZD4Q9ULV1 537 aa17.96■□□□□ 0.47
EPCAM-203ENST00000419334 NCKAP1Q9Y2A7 1128 aa17.96■□□□□ 0.47
EPCAM-203ENST00000419334 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.96■□□□□ 0.47
EPCAM-203ENST00000419334 RALGAPA1Q6GYQ0 2036 aa17.96■□□□□ 0.47
EPCAM-203ENST00000419334 A0A1W2PP55 124 aa17.95■□□□□ 0.46
EPCAM-203ENST00000419334 MACROD2A1Z1Q3 448 aa17.95■□□□□ 0.46
EPCAM-203ENST00000419334 GFRA3O60609 400 aa17.95■□□□□ 0.46
EPCAM-203ENST00000419334 NDUFS2O75306 463 aa17.95■□□□□ 0.46
EPCAM-203ENST00000419334 PRNPP04156 253 aa17.95■□□□□ 0.46
EPCAM-203ENST00000419334 CTNNA1P35221 906 aaKnown RBP17.95■□□□□ 0.46
EPCAM-203ENST00000419334 DNA2P51530 1060 aa17.95■□□□□ 0.46
EPCAM-203ENST00000419334 CCNHP51946 323 aaPredicted RBP17.95■□□□□ 0.46
EPCAM-203ENST00000419334 RFTN1Q14699 578 aaPredicted RBP17.95■□□□□ 0.46
EPCAM-203ENST00000419334 CYTH1Q15438 398 aa17.95■□□□□ 0.46
EPCAM-203ENST00000419334 ATPAF2Q8N5M1 289 aa17.95■□□□□ 0.46
EPCAM-203ENST00000419334 RNF10Q8N5U6 811 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms