RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 SERPINH1P50454 418 aaKnown RBP18.13■□□□□ 0.49
HDDC3-201ENST00000330334 HDAC4P56524 1084 aa18.13■□□□□ 0.49
HDDC3-201ENST00000330334 NXPH1P58417 271 aa18.13■□□□□ 0.49
HDDC3-201ENST00000330334 TAS2R38P59533 333 aa18.13■□□□□ 0.49
HDDC3-201ENST00000330334 TYRO3Q06418 890 aa18.13■□□□□ 0.49
HDDC3-201ENST00000330334 SCAPQ12770 1279 aa18.13■□□□□ 0.49
HDDC3-201ENST00000330334 C22orf39Q6P5X5 142 aa18.13■□□□□ 0.49
HDDC3-201ENST00000330334 LINGO4Q6UY18 593 aa18.13■□□□□ 0.49
HDDC3-201ENST00000330334 MON1BQ7L1V2 547 aa18.13■□□□□ 0.49
HDDC3-201ENST00000330334 NLRP14Q86W24 1093 aa18.13■□□□□ 0.49
HDDC3-201ENST00000330334 OXR1Q8N573 874 aa18.13■□□□□ 0.49
HDDC3-201ENST00000330334 PCDH20Q8N6Y1 951 aaKnown RBP18.13■□□□□ 0.49
HDDC3-201ENST00000330334 ISG20Q96AZ6 181 aaKnown RBP18.13■□□□□ 0.49
HDDC3-201ENST00000330334 AGPAT1Q99943 283 aa18.13■□□□□ 0.49
HDDC3-201ENST00000330334 SPON2Q9BUD6 331 aa18.13■□□□□ 0.49
HDDC3-201ENST00000330334 ATP13A1Q9HD20 1204 aa18.13■□□□□ 0.49
HDDC3-201ENST00000330334 TMEM248Q9NWD8 314 aa18.13■□□□□ 0.49
HDDC3-201ENST00000330334 BTBD3Q9Y2F9 522 aa18.13■□□□□ 0.49
HDDC3-201ENST00000330334 WDFY3Q8IZQ1 3526 aa18.13■□□□□ 0.49
HDDC3-201ENST00000330334 FREM2Q5SZK8 3169 aa18.13■□□□□ 0.49
HDDC3-201ENST00000330334 DOCK4Q8N1I0 1966 aa18.12■□□□□ 0.49
HDDC3-201ENST00000330334 TCRBV5S1A1TA0A578 114 aa18.12■□□□□ 0.49
HDDC3-201ENST00000330334 PRAMEF26H0Y7S4 382 aa18.12■□□□□ 0.49
HDDC3-201ENST00000330334 BNIP3LO60238 219 aa18.12■□□□□ 0.49
HDDC3-201ENST00000330334 PLEKP08567 350 aaPredicted RBP18.12■□□□□ 0.49
HDDC3-201ENST00000330334 FERP16591 822 aa18.12■□□□□ 0.49
HDDC3-201ENST00000330334 GLDCP23378 1020 aa18.12■□□□□ 0.49
HDDC3-201ENST00000330334 ARRB1P49407 418 aaPredicted RBP18.12■□□□□ 0.49
HDDC3-201ENST00000330334 GEMIN4P57678 1058 aaKnown RBP18.12■□□□□ 0.49
HDDC3-201ENST00000330334 ARF5P84085 180 aa18.12■□□□□ 0.49
HDDC3-201ENST00000330334 CDO1Q16878 200 aa18.12■□□□□ 0.49
HDDC3-201ENST00000330334 SETMARQ53H47 684 aaPredicted RBP18.12■□□□□ 0.49
HDDC3-201ENST00000330334 RAB6CQ53S08 254 aa18.12■□□□□ 0.49
HDDC3-201ENST00000330334 PPP1R2P3Q6NXS1 205 aa18.12■□□□□ 0.49
HDDC3-201ENST00000330334 WDR59Q6PJI9 974 aa18.12■□□□□ 0.49
HDDC3-201ENST00000330334 CCNI2Q6ZMN8 369 aaPredicted RBP18.12■□□□□ 0.49
HDDC3-201ENST00000330334 DPY19L3Q6ZPD9 716 aa18.12■□□□□ 0.49
HDDC3-201ENST00000330334 PHLDB2Q86SQ0 1253 aa18.12■□□□□ 0.49
HDDC3-201ENST00000330334 PNPLA1Q8N8W4 532 aa18.12■□□□□ 0.49
HDDC3-201ENST00000330334 SAP25Q8TEE9 199 aa18.12■□□□□ 0.49
HDDC3-201ENST00000330334 FAM172AQ8WUF8 416 aa18.12■□□□□ 0.49
HDDC3-201ENST00000330334 PPP1R16AQ96I34 528 aa18.12■□□□□ 0.49
HDDC3-201ENST00000330334 SELENOOQ9BVL4 669 aa18.12■□□□□ 0.49
HDDC3-201ENST00000330334 RAB6CQ9H0N0 254 aa18.12■□□□□ 0.49
HDDC3-201ENST00000330334 MAGEH1Q9H213 219 aa18.12■□□□□ 0.49
HDDC3-201ENST00000330334 DYRK4Q9NR20 520 aa18.12■□□□□ 0.49
HDDC3-201ENST00000330334 IL36AQ9UHA7 158 aa18.12■□□□□ 0.49
HDDC3-201ENST00000330334 ZMIZ1Q9ULJ6 1067 aa18.12■□□□□ 0.49
HDDC3-201ENST00000330334 KPNA3O00505 521 aaPredicted RBP18.11■□□□□ 0.49
HDDC3-201ENST00000330334 LRIG2O94898 1065 aa18.11■□□□□ 0.49
HDDC3-201ENST00000330334 ATXN1LP0C7T5 689 aaKnown RBP18.11■□□□□ 0.49
HDDC3-201ENST00000330334 ATP1A3P13637 1013 aa18.11■□□□□ 0.49
HDDC3-201ENST00000330334 GPD1P21695 349 aa18.11■□□□□ 0.49
HDDC3-201ENST00000330334 L1CAMP32004 1257 aa18.11■□□□□ 0.49
HDDC3-201ENST00000330334 ZNF143P52747 638 aaPredicted RBP18.11■□□□□ 0.49
HDDC3-201ENST00000330334 STAT4Q14765 748 aa18.11■□□□□ 0.49
HDDC3-201ENST00000330334 SHBQ15464 509 aa18.11■□□□□ 0.49
HDDC3-201ENST00000330334 POM121L1PQ3SYA9 428 aa18.11■□□□□ 0.49
HDDC3-201ENST00000330334 ARSIQ5FYB1 569 aa18.11■□□□□ 0.49
HDDC3-201ENST00000330334 ERN2Q76MJ5 926 aaKnown RBP18.11■□□□□ 0.49
HDDC3-201ENST00000330334 IRF2BP2Q7Z5L9 587 aa18.11■□□□□ 0.49
HDDC3-201ENST00000330334 CHST14Q8NCH0 376 aa18.11■□□□□ 0.49
HDDC3-201ENST00000330334 VCPIP1Q96JH7 1222 aa18.11■□□□□ 0.49
HDDC3-201ENST00000330334 TMEM63CQ9P1W3 806 aa18.11■□□□□ 0.49
HDDC3-201ENST00000330334 NEU3Q9UQ49 428 aa18.11■□□□□ 0.49
HDDC3-201ENST00000330334 NYNRINQ9P2P1 1898 aaKnown RBP18.11■□□□□ 0.49
HDDC3-201ENST00000330334 ZFHX4Q86UP3 3567 aa18.1■□□□□ 0.49
HDDC3-201ENST00000330334 ANKRD62A6NC57 917 aa18.1■□□□□ 0.49
HDDC3-201ENST00000330334 FAM72CH0Y354 149 aa18.1■□□□□ 0.49
HDDC3-201ENST00000330334 GJB6O95452 261 aa18.1■□□□□ 0.49
HDDC3-201ENST00000330334 CD160O95971 181 aa18.1■□□□□ 0.49
HDDC3-201ENST00000330334 CAPNS1P04632 268 aa18.1■□□□□ 0.49
HDDC3-201ENST00000330334 MAT2AP31153 395 aaKnown RBP18.1■□□□□ 0.49
HDDC3-201ENST00000330334 AIF1P55008 147 aa18.1■□□□□ 0.49
HDDC3-201ENST00000330334 CARD16Q5EG05 197 aa18.1■□□□□ 0.49
HDDC3-201ENST00000330334 PPP1R15BQ5SWA1 713 aa18.1■□□□□ 0.49
HDDC3-201ENST00000330334 FAM72AQ5TYM5 149 aa18.1■□□□□ 0.49
HDDC3-201ENST00000330334 ACAD10Q6JQN1 1059 aa18.1■□□□□ 0.49
HDDC3-201ENST00000330334 FAM72DQ6L9T8 149 aa18.1■□□□□ 0.49
HDDC3-201ENST00000330334 RWDD4Q6NW29 188 aaKnown RBP18.1■□□□□ 0.49
HDDC3-201ENST00000330334 TMPRSS7Q7RTY8 843 aa18.1■□□□□ 0.49
HDDC3-201ENST00000330334 SLFN11Q7Z7L1 901 aa18.1■□□□□ 0.49
HDDC3-201ENST00000330334 HORMAD1Q86X24 394 aa18.1■□□□□ 0.49
HDDC3-201ENST00000330334 FAM72BQ86X60 149 aa18.1■□□□□ 0.49
HDDC3-201ENST00000330334 DRC7Q8IY82 874 aa18.1■□□□□ 0.49
HDDC3-201ENST00000330334 AOPEPQ8N6M6 819 aa18.1■□□□□ 0.49
HDDC3-201ENST00000330334 CCDC185Q8N715 623 aa18.1■□□□□ 0.49
HDDC3-201ENST00000330334 TMEM145Q8NBT3 493 aa18.1■□□□□ 0.49
HDDC3-201ENST00000330334 ARHGEF2Q92974 986 aaKnown RBP18.1■□□□□ 0.49
HDDC3-201ENST00000330334 ARRDC3Q96B67 414 aa18.1■□□□□ 0.49
HDDC3-201ENST00000330334 TBC1D31Q96DN5 1066 aa18.1■□□□□ 0.49
HDDC3-201ENST00000330334 LRIG1Q96JA1 1093 aa18.1■□□□□ 0.49
HDDC3-201ENST00000330334 HEPHQ9BQS7 1158 aa18.1■□□□□ 0.49
HDDC3-201ENST00000330334 SYT11Q9BT88 431 aa18.1■□□□□ 0.49
HDDC3-201ENST00000330334 TNKS2Q9H2K2 1166 aa18.1■□□□□ 0.49
HDDC3-201ENST00000330334 RTN4Q9NQC3 1192 aaKnown RBP18.1■□□□□ 0.49
HDDC3-201ENST00000330334 HPCAL4Q9UM19 191 aa18.1■□□□□ 0.49
HDDC3-201ENST00000330334 WASF2Q9Y6W5 498 aa18.1■□□□□ 0.49
HDDC3-201ENST00000330334 PLXNA2O75051 1894 aa18.09■□□□□ 0.49
HDDC3-201ENST00000330334 SMTNL1A8MU46 457 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms