RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 AQP5P55064 265 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 IL2P60568 153 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 KYAT1Q16773 422 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 MCEEQ96PE7 176 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 KCTD5Q9NXV2 234 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 I3L521 148 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 CBX6O95503 412 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 ZNF567Q8N184 647 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 KAT2AQ92830 837 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 BHMG1C9JSJ3 638 aaPredicted RBP11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 PLK4O00444 970 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 EIF5AL1Q6IS14 154 aaKnown RBP11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 DENND5BQ6ZUT9 1274 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 FUKQ8N0W3 1084 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 RETREG1Q9H6L5 497 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 FAM49BQ9NUQ9 324 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 ABCA9Q8IUA7 1624 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 NUAK1O60285 661 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 ITGB3P05106 788 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 GADD45AP24522 165 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 AP2S1P53680 142 aaPredicted RBP11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 CREB5Q02930 508 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 UBXN11Q5T124 520 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 ATAD3CQ5T2N8 411 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 NDUFAF4Q9P032 175 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 ERVV-1B6SEH8 477 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 MID1O15344 667 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 AP5Z1O43299 807 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 DPYDQ12882 1025 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 ITGA7Q13683 1181 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 SFRP1Q8N474 314 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 RP9Q8TA86 221 aaKnown RBP11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 PIGBQ92521 554 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 THRSPQ92748 146 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 AHSPQ9NZD4 102 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 CACNA1GO43497 2377 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 ERBB3P21860 1342 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 RPL9P32969 192 aaKnown RBP11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 ATG9AQ7Z3C6 839 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 ADGRF4Q8IZF3 695 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 GUF1Q8N442 669 aaKnown RBP11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 SLC30A1Q9Y6M5 507 aa11.32□□□□□ -0.6
HDGFL3-201ENST00000299633 GH2P01242 217 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 RTKN2Q8IZC4 609 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 TEX47Q8TBZ9 253 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 NEK7Q8TDX7 302 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 NDNQ99608 321 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 TMEM47Q9BQJ4 181 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 LXNQ9BS40 222 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 DNAJC16Q9Y2G8 782 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 BIKQ13323 160 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 CDYL2Q8N8U2 506 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 POC1BQ8TC44 478 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 GGA3Q9NZ52 723 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 FESP07332 822 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 GSTT2BP0CG30 244 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 PSKH1P11801 424 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 MIIPQ5JXC2 388 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 TBC1D21Q8IYX1 336 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 BAP1Q92560 729 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 SEPT5Q99719 369 aaPredicted RBP11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 FAM105AQ9NUU6 356 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 ALDH1A1P00352 501 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 ASNSP08243 561 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 PRKACAP17612 351 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 NEK3P51956 506 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 GPR107Q5VW38 600 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 FAM71DQ8N9W8 422 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 FNDC5Q8NAU1 212 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 TFB1MQ8WVM0 346 aaKnown RBP11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 C18orf8Q96DM3 657 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 POLR3FQ9H1D9 316 aaPredicted RBP11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 PCDHA6Q9UN73 950 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 PCDHA8Q9Y5H6 950 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 WNK2Q9Y3S1 2297 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 TULP4Q9NRJ4 1543 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 USP17L10C9JJH3 530 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 PPEF2O14830 753 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 CASC3O15234 703 aaKnown RBP11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 ME2P23368 584 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 CHKAP35790 457 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 C12orf43Q96C57 262 aaKnown RBP11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 EMILIN2Q9BXX0 1053 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 TBC1D30Q9Y2I9 924 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 AP3M1Q9Y2T2 418 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 EMSYQ7Z589 1322 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 YLPM1P49750 1951 aaKnown RBP11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 PRKCBP05771 671 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 GPD1P21695 349 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 IDH2P48735 452 aaKnown RBP11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 MOGSQ13724 837 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 ACTRT2Q8TDY3 377 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 ZNF669Q96BR6 464 aaPredicted RBP11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 FBXO40Q9UH90 709 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 NUDT7P0C024 238 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 MTSS1LQ765P7 747 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 APBB2Q92870 758 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 SAMD4AQ9UPU9 718 aaKnown RBP11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 PXDNLA1KZ92 1463 aa11.31□□□□□ -0.6
HDGFL3-201ENST00000299633 CASKO14936 926 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms