RNA–Protein interactions for RNA: ENST00000298564.14

TSPAN17-201, Transcript of tetraspanin 17, humanhuman

TSL 2 BASIC

Gene TSPAN17, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-201ENST00000298564 GLRA3O75311 464 aa18.12■□□□□ 0.49
TSPAN17-201ENST00000298564 CRYBB1P53674 252 aaPredicted RBP18.12■□□□□ 0.49
TSPAN17-201ENST00000298564 MAP3K7CLP57077 242 aa18.12■□□□□ 0.49
TSPAN17-201ENST00000298564 DSELQ8IZU8 1212 aa18.12■□□□□ 0.49
TSPAN17-201ENST00000298564 TOP6BLQ8N6T0 577 aa18.12■□□□□ 0.49
TSPAN17-201ENST00000298564 JADE3Q92613 823 aa18.12■□□□□ 0.49
TSPAN17-201ENST00000298564 SYBUQ9NX95 663 aa18.12■□□□□ 0.49
TSPAN17-201ENST00000298564 TMCO1Q9UM00 188 aa18.12■□□□□ 0.49
TSPAN17-201ENST00000298564 PSMD13Q9UNM6 376 aa18.12■□□□□ 0.49
TSPAN17-201ENST00000298564 DOCK3Q8IZD9 2030 aa18.12■□□□□ 0.49
TSPAN17-201ENST00000298564 TMCC1O94876 653 aa18.11■□□□□ 0.49
TSPAN17-201ENST00000298564 NOS2P35228 1153 aa18.11■□□□□ 0.49
TSPAN17-201ENST00000298564 MAP2K5Q13163 448 aa18.11■□□□□ 0.49
TSPAN17-201ENST00000298564 CEACAM7Q14002 265 aa18.11■□□□□ 0.49
TSPAN17-201ENST00000298564 MORN1Q5T089 497 aa18.11■□□□□ 0.49
TSPAN17-201ENST00000298564 DUS1LQ6P1R4 473 aaKnown RBP18.11■□□□□ 0.49
TSPAN17-201ENST00000298564 CLEC20AQ6ZU45 233 aa18.11■□□□□ 0.49
TSPAN17-201ENST00000298564 SPATA6LQ8N4H0 392 aa18.11■□□□□ 0.49
TSPAN17-201ENST00000298564 RIN3Q8TB24 985 aa18.11■□□□□ 0.49
TSPAN17-201ENST00000298564 NPY6RQ99463 290 aa18.11■□□□□ 0.49
TSPAN17-201ENST00000298564 HACD1B0YJ81 288 aa18.11■□□□□ 0.49
TSPAN17-201ENST00000298564 DAB1O75553 588 aa18.11■□□□□ 0.49
TSPAN17-201ENST00000298564 ITGA7Q13683 1181 aa18.11■□□□□ 0.49
TSPAN17-201ENST00000298564 ZBTB46Q86UZ6 589 aa18.11■□□□□ 0.49
TSPAN17-201ENST00000298564 SIX6OS1Q8N1H7 587 aa18.11■□□□□ 0.49
TSPAN17-201ENST00000298564 TDRD5Q8NAT2 981 aaKnown RBP18.11■□□□□ 0.49
TSPAN17-201ENST00000298564 RNF169Q8NCN4 708 aa18.11■□□□□ 0.49
TSPAN17-201ENST00000298564 KLHL32Q96NJ5 620 aa18.11■□□□□ 0.49
TSPAN17-201ENST00000298564 NPAS2Q99743 824 aa18.11■□□□□ 0.49
TSPAN17-201ENST00000298564 CCDC28BQ9BUN5 200 aa18.11■□□□□ 0.49
TSPAN17-201ENST00000298564 PIGVQ9NUD9 493 aa18.11■□□□□ 0.49
TSPAN17-201ENST00000298564 PTTG2Q9NZH5 202 aa18.11■□□□□ 0.49
TSPAN17-201ENST00000298564 SORCS3Q9UPU3 1222 aa18.11■□□□□ 0.49
TSPAN17-201ENST00000298564 C17orf102A2RUQ5 167 aa18.1■□□□□ 0.49
TSPAN17-201ENST00000298564 AFF1P51825 1210 aaKnown RBP18.1■□□□□ 0.49
TSPAN17-201ENST00000298564 TKTL1P51854 596 aa18.1■□□□□ 0.49
TSPAN17-201ENST00000298564 DCLK2Q8N568 766 aa18.1■□□□□ 0.49
TSPAN17-201ENST00000298564 NT5C3BQ969T7 300 aa18.1■□□□□ 0.49
TSPAN17-201ENST00000298564 APOL2Q9BQE5 337 aa18.1■□□□□ 0.49
TSPAN17-201ENST00000298564 PRDM12Q9H4Q4 367 aa18.1■□□□□ 0.49
TSPAN17-201ENST00000298564 SNX15Q9NRS6 342 aa18.1■□□□□ 0.49
TSPAN17-201ENST00000298564 TIMM13Q9Y5L4 95 aaPredicted RBP18.1■□□□□ 0.49
TSPAN17-201ENST00000298564 NRP1O14786 923 aa18.1■□□□□ 0.49
TSPAN17-201ENST00000298564 PIK3R1P27986 724 aa18.1■□□□□ 0.49
TSPAN17-201ENST00000298564 STT3AP46977 705 aa18.1■□□□□ 0.49
TSPAN17-201ENST00000298564 SERPINB9P50453 376 aa18.1■□□□□ 0.49
TSPAN17-201ENST00000298564 ADARP55265 1226 aaKnown RBP18.1■□□□□ 0.49
TSPAN17-201ENST00000298564 CDH15P55291 814 aa18.1■□□□□ 0.49
TSPAN17-201ENST00000298564 CPNE9Q8IYJ1 553 aa18.1■□□□□ 0.49
TSPAN17-201ENST00000298564 KCNK16Q96T55 309 aa18.1■□□□□ 0.49
TSPAN17-201ENST00000298564 TCF7L2Q9NQB0 619 aa18.1■□□□□ 0.49
TSPAN17-201ENST00000298564 ANLNQ9NQW6 1124 aa18.1■□□□□ 0.49
TSPAN17-201ENST00000298564 DNAJC28Q9NX36 388 aa18.1■□□□□ 0.49
TSPAN17-201ENST00000298564 RCOR3Q9P2K3 495 aaPredicted RBP18.1■□□□□ 0.49
TSPAN17-201ENST00000298564 RPS6KL1Q9Y6S9 549 aa18.1■□□□□ 0.49
TSPAN17-201ENST00000298564 PDCD11Q14690 1871 aaKnown RBP18.1■□□□□ 0.49
TSPAN17-201ENST00000298564 CYP2B6P20813 491 aa18.09■□□□□ 0.49
TSPAN17-201ENST00000298564 PSMB4P28070 264 aa18.09■□□□□ 0.49
TSPAN17-201ENST00000298564 CPT1AP50416 773 aa18.09■□□□□ 0.49
TSPAN17-201ENST00000298564 CTU1Q7Z7A3 348 aaKnown RBP18.09■□□□□ 0.49
TSPAN17-201ENST00000298564 MARVELD2Q8N4S9 558 aa18.09■□□□□ 0.49
TSPAN17-201ENST00000298564 ARNTL2Q8WYA1 636 aa18.09■□□□□ 0.49
TSPAN17-201ENST00000298564 FCRL3Q96P31 734 aaPredicted RBP18.09■□□□□ 0.49
TSPAN17-201ENST00000298564 PCDHAC1Q9H158 963 aa18.09■□□□□ 0.49
TSPAN17-201ENST00000298564 MKS1Q9NXB0 559 aa18.09■□□□□ 0.49
TSPAN17-201ENST00000298564 STAP1Q9ULZ2 295 aa18.09■□□□□ 0.49
TSPAN17-201ENST00000298564 FAM72CH0Y354 149 aa18.09■□□□□ 0.49
TSPAN17-201ENST00000298564 CASQ2O14958 399 aaPredicted RBP18.09■□□□□ 0.49
TSPAN17-201ENST00000298564 HNRNPCP07910 306 aaKnown RBP eCLIP18.09■□□□□ 0.49
TSPAN17-201ENST00000298564 AVPR1AP37288 418 aa18.09■□□□□ 0.49
TSPAN17-201ENST00000298564 LSM12Q3MHD2 195 aaKnown RBP18.09■□□□□ 0.49
TSPAN17-201ENST00000298564 RARS2Q5T160 578 aaKnown RBP18.09■□□□□ 0.49
TSPAN17-201ENST00000298564 FAM72AQ5TYM5 149 aa18.09■□□□□ 0.49
TSPAN17-201ENST00000298564 FAM72DQ6L9T8 149 aa18.09■□□□□ 0.49
TSPAN17-201ENST00000298564 FAM72BQ86X60 149 aa18.09■□□□□ 0.49
TSPAN17-201ENST00000298564 PCDH20Q8N6Y1 951 aaKnown RBP18.09■□□□□ 0.49
TSPAN17-201ENST00000298564 SLC7A14Q8TBB6 771 aa18.09■□□□□ 0.49
TSPAN17-201ENST00000298564 RAB3IL1Q8TBN0 382 aa18.09■□□□□ 0.49
TSPAN17-201ENST00000298564 WNT8BQ93098 351 aa18.09■□□□□ 0.49
TSPAN17-201ENST00000298564 ATP6V1E2Q96A05 226 aa18.09■□□□□ 0.49
TSPAN17-201ENST00000298564 PPP1R10Q96QC0 940 aaKnown RBP18.09■□□□□ 0.49
TSPAN17-201ENST00000298564 CDH19Q9H159 772 aa18.09■□□□□ 0.49
TSPAN17-201ENST00000298564 CRTAC1Q9NQ79 661 aa18.09■□□□□ 0.49
TSPAN17-201ENST00000298564 DCDC2Q9UHG0 476 aa18.09■□□□□ 0.49
TSPAN17-201ENST00000298564 TMEM233B4DJY2 109 aa18.08■□□□□ 0.49
TSPAN17-201ENST00000298564 KCNK1O00180 336 aa18.08■□□□□ 0.49
TSPAN17-201ENST00000298564 ATP9BO43861 1147 aa18.08■□□□□ 0.49
TSPAN17-201ENST00000298564 CELF2O95319 508 aaKnown RBP18.08■□□□□ 0.49
TSPAN17-201ENST00000298564 FYNP06241 537 aa18.08■□□□□ 0.49
TSPAN17-201ENST00000298564 LRPAP1P30533 357 aa18.08■□□□□ 0.49
TSPAN17-201ENST00000298564 EPGNQ6UW88 154 aa18.08■□□□□ 0.49
TSPAN17-201ENST00000298564 PSTKQ8IV42 348 aaKnown RBP18.08■□□□□ 0.49
TSPAN17-201ENST00000298564 KCTD13Q8WZ19 329 aa18.08■□□□□ 0.49
TSPAN17-201ENST00000298564 BTBD9Q96Q07 612 aa18.08■□□□□ 0.49
TSPAN17-201ENST00000298564 TSPAN18Q96SJ8 248 aa18.08■□□□□ 0.49
TSPAN17-201ENST00000298564 ULBP1Q9BZM6 244 aa18.08■□□□□ 0.49
TSPAN17-201ENST00000298564 AP5M1Q9H0R1 490 aa18.08■□□□□ 0.49
TSPAN17-201ENST00000298564 RBM38Q9H0Z9 239 aaKnown RBP18.08■□□□□ 0.49
TSPAN17-201ENST00000298564 TSPYL2Q9H2G4 693 aaPredicted RBP18.08■□□□□ 0.49
TSPAN17-201ENST00000298564 CAAP1Q9H8G2 361 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms