RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 NEMP1O14524 444 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 KIF3CO14782 793 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 PHGDHO43175 533 aaKnown RBP15.49■□□□□ 0.07
DDX56-201ENST00000258772 VCLP18206 1134 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 GABRB3P28472 473 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 CXCR3P49682 368 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 ZNF135P52742 658 aaPredicted RBP15.49■□□□□ 0.07
DDX56-201ENST00000258772 CRYBB1P53674 252 aaPredicted RBP15.49■□□□□ 0.07
DDX56-201ENST00000258772 PRKAA2P54646 552 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 NAGLUP54802 743 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 PPP2R5DQ14738 602 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 CNTD1Q8N815 330 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 CELF6Q96J87 481 aaKnown RBP15.49■□□□□ 0.07
DDX56-201ENST00000258772 MS4A4AQ96JQ5 239 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 TSNARE1Q96NA8 513 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 STK39Q9UEW8 545 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 ZDHHC2Q9UIJ5 367 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 GNEQ9Y223 722 aaKnown RBP15.49■□□□□ 0.07
DDX56-201ENST00000258772 RUVBL2Q9Y230 463 aaKnown RBP15.49■□□□□ 0.07
DDX56-201ENST00000258772 SLC45A1Q9Y2W3 748 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 TIMM13Q9Y5L4 95 aaPredicted RBP15.49■□□□□ 0.07
DDX56-201ENST00000258772 SCN4AP35499 1836 aa15.49■□□□□ 0.07
DDX56-201ENST00000258772 GRID2O43424 1007 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 AHSGP02765 367 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 DNAJB2P25686 324 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 GLRBP48167 497 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 LHX1P48742 406 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 NUDT2P50583 147 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 HK2P52789 917 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 PRKAA1Q13131 559 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 SLC12A1Q13621 1099 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 PM20D1Q6GTS8 502 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 EP400NLQ6ZTU2 488 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 USP50Q70EL3 339 aaPredicted RBP15.48■□□□□ 0.07
DDX56-201ENST00000258772 BHLHA9Q7RTU4 235 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 LINC00523Q86TU6 105 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 SNX32Q86XE0 403 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.48■□□□□ 0.07
DDX56-201ENST00000258772 KYQ8NBH2 561 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 RP9Q8TA86 221 aaKnown RBP15.48■□□□□ 0.07
DDX56-201ENST00000258772 PACSIN3Q9UKS6 424 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 PRPF19Q9UMS4 504 aaKnown RBP15.48■□□□□ 0.07
DDX56-201ENST00000258772 HHLA1C9JL84 531 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 PSMD3O43242 534 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 PEX1O43933 1283 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 DDHD2O94830 711 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 SLC35E2BP0CK96 405 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 PIM1P11309 404 aaPredicted RBP15.48■□□□□ 0.07
DDX56-201ENST00000258772 POLE2P56282 527 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 ROR2Q01974 943 aaKnown RBP15.48■□□□□ 0.07
DDX56-201ENST00000258772 DLG1Q12959 904 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 PPM1LQ5SGD2 360 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 DCLRE1AQ6PJP8 1040 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 C16orf89Q6UX73 402 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 TMC7Q7Z402 723 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 TMEM86AQ8N2M4 240 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 FSTL5Q8N475 847 aaPredicted RBP15.48■□□□□ 0.07
DDX56-201ENST00000258772 CPSF7Q8N684 471 aaKnown RBP15.48■□□□□ 0.07
DDX56-201ENST00000258772 STYXQ8WUJ0 223 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 KCTD4Q8WVF5 259 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 SCYL1Q96KG9 808 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 SERPINI1Q99574 410 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 SH3GL3Q99963 347 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 NUF2Q9BZD4 464 aa15.48■□□□□ 0.07
DDX56-201ENST00000258772 G3BP2Q9UN86 482 aaKnown RBP15.48■□□□□ 0.07
DDX56-201ENST00000258772 CCL15-CCL14A0A0B4J2E2 113 aa15.47■□□□□ 0.07
DDX56-201ENST00000258772 MEIS3P2A8K0S8 358 aa15.47■□□□□ 0.07
DDX56-201ENST00000258772 TARM1B6A8C7 271 aa15.47■□□□□ 0.07
DDX56-201ENST00000258772 CACNG3O60359 315 aa15.47■□□□□ 0.07
DDX56-201ENST00000258772 AVPR1AP37288 418 aa15.47■□□□□ 0.07
DDX56-201ENST00000258772 PSEN2P49810 448 aa15.47■□□□□ 0.07
DDX56-201ENST00000258772 CYLC2Q14093 348 aaPredicted RBP15.47■□□□□ 0.07
DDX56-201ENST00000258772 CCL15Q16663 113 aa15.47■□□□□ 0.07
DDX56-201ENST00000258772 MAP3K21Q5TCX8 1036 aa15.47■□□□□ 0.07
DDX56-201ENST00000258772 CWF19L1Q69YN2 538 aaKnown RBP15.47■□□□□ 0.07
DDX56-201ENST00000258772 PKN3Q6P5Z2 889 aa15.47■□□□□ 0.07
DDX56-201ENST00000258772 PLEKHH3Q7Z736 793 aa15.47■□□□□ 0.07
DDX56-201ENST00000258772 LCA5Q86VQ0 697 aa15.47■□□□□ 0.07
DDX56-201ENST00000258772 KLHDC8BQ8IXV7 354 aa15.47■□□□□ 0.07
DDX56-201ENST00000258772 DSELQ8IZU8 1212 aa15.47■□□□□ 0.07
DDX56-201ENST00000258772 CENPLQ8N0S6 344 aaPredicted RBP15.47■□□□□ 0.07
DDX56-201ENST00000258772 SPATA22Q8NHS9 363 aa15.47■□□□□ 0.07
DDX56-201ENST00000258772 USP33Q8TEY7 942 aa15.47■□□□□ 0.07
DDX56-201ENST00000258772 ZFAND2BQ8WV99 257 aa15.47■□□□□ 0.07
DDX56-201ENST00000258772 VTI1BQ9UEU0 232 aa15.47■□□□□ 0.07
DDX56-201ENST00000258772 PSMD13Q9UNM6 376 aa15.47■□□□□ 0.07
DDX56-201ENST00000258772 SLC22A2O15244 555 aa15.46■□□□□ 0.07
DDX56-201ENST00000258772 COL6A2P12110 1019 aa15.46■□□□□ 0.07
DDX56-201ENST00000258772 MMEL1Q495T6 779 aa15.46■□□□□ 0.07
DDX56-201ENST00000258772 PCID2Q5JVF3 399 aa15.46■□□□□ 0.07
DDX56-201ENST00000258772 OGFRL1Q5TC84 451 aaPredicted RBP15.46■□□□□ 0.07
DDX56-201ENST00000258772 SLC41A1Q8IVJ1 513 aa15.46■□□□□ 0.07
DDX56-201ENST00000258772 MFN1Q8IWA4 741 aa15.46■□□□□ 0.07
DDX56-201ENST00000258772 LSMEM2Q8N112 164 aa15.46■□□□□ 0.07
DDX56-201ENST00000258772 TSGA13Q96PP4 275 aa15.46■□□□□ 0.07
DDX56-201ENST00000258772 CDRT15Q96T59 188 aa15.46■□□□□ 0.07
DDX56-201ENST00000258772 ZNF385DQ9H6B1 395 aa15.46■□□□□ 0.07
DDX56-201ENST00000258772 ACOT9Q9Y305 439 aa15.46■□□□□ 0.07
DDX56-201ENST00000258772 AAR2Q9Y312 384 aaKnown RBP15.46■□□□□ 0.07
DDX56-201ENST00000258772 PTCH2Q9Y6C5 1203 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms