RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 BMFQ96LC9 184 aa11.31□□□□□ -0.6
PTP4A1-207ENST00000639568 IPO9Q96P70 1041 aaKnown RBP11.31□□□□□ -0.6
PTP4A1-207ENST00000639568 UBXN6Q9BZV1 441 aa11.31□□□□□ -0.6
PTP4A1-207ENST00000639568 PRDM8Q9NQV8 689 aa11.31□□□□□ -0.6
PTP4A1-207ENST00000639568 DYRK4Q9NR20 520 aa11.31□□□□□ -0.6
PTP4A1-207ENST00000639568 APOBEC3BQ9UH17 382 aaKnown RBP11.31□□□□□ -0.6
PTP4A1-207ENST00000639568 KLF15Q9UIH9 416 aa11.31□□□□□ -0.6
PTP4A1-207ENST00000639568 ZFHX3Q15911 3703 aa11.31□□□□□ -0.6
PTP4A1-207ENST00000639568 ZFC3H1O60293 1989 aaKnown RBP11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 POM121BA6NF01 834 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 TTLL8A6PVC2 850 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 MCF2LO15068 1137 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 ALOX15BO15296 676 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 EIF3DO15371 548 aaKnown RBP eCLIP11.3□□□□□ -0.65e-11■□□□□ 8.1
PTP4A1-207ENST00000639568 CAPN5O15484 640 aaPredicted RBP11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 BNIP3LO60238 219 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 GCATO75600 419 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 LUC7L3O95232 432 aaKnown RBP11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 BMP15O95972 392 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 RNF224P0DH78 156 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 LIFP15018 202 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 TXLNAP40222 546 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 ETV5P41161 510 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 ASPAP45381 313 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 NUCB2P80303 420 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 PIP5KL1Q5T9C9 394 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 BSPRYQ5W0U4 402 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 PM20D1Q6GTS8 502 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 PIGZQ86VD9 579 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 ZC3H18Q86VM9 953 aaKnown RBP11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 APCDD1Q8J025 514 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 CFAP52Q8N1V2 620 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 ARL10Q8N8L6 244 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 NDRG1Q92597 394 aaKnown RBP11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 NKD1Q969G9 470 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 EPSTI1Q96J88 318 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 TWNKQ96RR1 684 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 EPAS1Q99814 870 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 ULBP1Q9BZM6 244 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 SLC13A1Q9BZW2 595 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 B3GNT4Q9C0J1 378 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 LRRN3Q9H3W5 708 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 CASS4Q9NQ75 786 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 ABCC13Q9NSE7 274 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 SIRPGQ9P1W8 387 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 DKK3Q9UBP4 350 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 GGT7Q9UJ14 662 aa11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 FARP1Q9Y4F1 1045 aaPredicted RBP11.3□□□□□ -0.6
PTP4A1-207ENST00000639568 RP1L1Q8IWN7 2480 aaPredicted RBP11.29□□□□□ -0.6
PTP4A1-207ENST00000639568 FRMD3A2A2Y4 597 aa11.29□□□□□ -0.6
PTP4A1-207ENST00000639568 M0QYT0 321 aa11.29□□□□□ -0.6
PTP4A1-207ENST00000639568 KPNA3O00505 521 aaPredicted RBP11.29□□□□□ -0.6
PTP4A1-207ENST00000639568 FPGTO14772 594 aa11.29□□□□□ -0.6
PTP4A1-207ENST00000639568 YY2O15391 372 aa11.29□□□□□ -0.6
PTP4A1-207ENST00000639568 EXOC3O60645 756 aa11.29□□□□□ -0.6
PTP4A1-207ENST00000639568 VNN1O95497 513 aa11.29□□□□□ -0.6
PTP4A1-207ENST00000639568 PAK4O96013 591 aaPredicted RBP11.29□□□□□ -0.6
PTP4A1-207ENST00000639568 PRKAR1AP10644 381 aa11.29□□□□□ -0.6
PTP4A1-207ENST00000639568 CD58P19256 250 aa11.29□□□□□ -0.6
PTP4A1-207ENST00000639568 GRNP28799 593 aaKnown RBP11.29□□□□□ -0.6
PTP4A1-207ENST00000639568 NUMBP49757 651 aa11.29□□□□□ -0.6
PTP4A1-207ENST00000639568 INCA1Q0VD86 236 aa11.29□□□□□ -0.6
PTP4A1-207ENST00000639568 PTK2BQ14289 1009 aa11.29□□□□□ -0.6
PTP4A1-207ENST00000639568 RAB41Q5JT25 222 aa11.29□□□□□ -0.6
PTP4A1-207ENST00000639568 PHF19Q5T6S3 580 aa11.29□□□□□ -0.6
PTP4A1-207ENST00000639568 C1QL3Q5VWW1 255 aa11.29□□□□□ -0.6
PTP4A1-207ENST00000639568 SEL1L3Q68CR1 1132 aa11.29□□□□□ -0.6
PTP4A1-207ENST00000639568 RBFAQ8N0V3 343 aa11.29□□□□□ -0.6
PTP4A1-207ENST00000639568 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.29□□□□□ -0.6
PTP4A1-207ENST00000639568 FRS2Q8WU20 508 aa11.29□□□□□ -0.6
PTP4A1-207ENST00000639568 PRICKLE1Q96MT3 831 aaPredicted RBP11.29□□□□□ -0.6
PTP4A1-207ENST00000639568 HAPLN3Q96S86 360 aa11.29□□□□□ -0.6
PTP4A1-207ENST00000639568 SLC17A9Q9BYT1 436 aa11.29□□□□□ -0.6
PTP4A1-207ENST00000639568 IMPG2Q9BZV3 1241 aa11.29□□□□□ -0.6
PTP4A1-207ENST00000639568 LRRC4Q9HBW1 653 aa11.29□□□□□ -0.6
PTP4A1-207ENST00000639568 GPR27Q9NS67 375 aa11.29□□□□□ -0.6
PTP4A1-207ENST00000639568 DONSONQ9NYP3 566 aa11.29□□□□□ -0.6
PTP4A1-207ENST00000639568 RABGEF1Q9UJ41 708 aa11.29□□□□□ -0.6
PTP4A1-207ENST00000639568 TP53TG5Q9Y2B4 290 aa11.29□□□□□ -0.6
PTP4A1-207ENST00000639568 A0A1W2PQM1 296 aa11.28□□□□□ -0.6
PTP4A1-207ENST00000639568 LRRIQ3A6PVS8 624 aaPredicted RBP11.28□□□□□ -0.6
PTP4A1-207ENST00000639568 CLDN1O95832 211 aa11.28□□□□□ -0.6
PTP4A1-207ENST00000639568 C4BPAP04003 597 aaKnown RBP11.28□□□□□ -0.6
PTP4A1-207ENST00000639568 HOXD13P35453 343 aa11.28□□□□□ -0.6
PTP4A1-207ENST00000639568 RECQLP46063 649 aaPredicted RBP11.28□□□□□ -0.6
PTP4A1-207ENST00000639568 THOP1P52888 689 aa11.28□□□□□ -0.6
PTP4A1-207ENST00000639568 TBX4P57082 545 aa11.28□□□□□ -0.6
PTP4A1-207ENST00000639568 SNRPFP62306 86 aaKnown RBP11.28□□□□□ -0.6
PTP4A1-207ENST00000639568 RPS21P63220 83 aaKnown RBP11.28□□□□□ -0.6
PTP4A1-207ENST00000639568 ZFP36L1Q07352 338 aaKnown RBP11.28□□□□□ -0.6
PTP4A1-207ENST00000639568 SGCGQ13326 291 aa11.28□□□□□ -0.6
PTP4A1-207ENST00000639568 SLC12A1Q13621 1099 aa11.28□□□□□ -0.6
PTP4A1-207ENST00000639568 DEFB109BQ30KR1 87 aa11.28□□□□□ -0.6
PTP4A1-207ENST00000639568 FAXCQ5TGI0 409 aa11.28□□□□□ -0.6
PTP4A1-207ENST00000639568 SPOPLQ6IQ16 392 aa11.28□□□□□ -0.6
PTP4A1-207ENST00000639568 Q6ZVU0 165 aa11.28□□□□□ -0.6
PTP4A1-207ENST00000639568 PHACTR4Q8IZ21 702 aa11.28□□□□□ -0.6
PTP4A1-207ENST00000639568 CACNA2D3Q8IZS8 1091 aa11.28□□□□□ -0.6
PTP4A1-207ENST00000639568 Q8N9G6 341 aaPredicted RBP11.28□□□□□ -0.6
PTP4A1-207ENST00000639568 OR6C4Q8NGE1 309 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms