RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 MRPL39Q9NYK5 338 aaKnown RBP4.63□□□□□ -1.67
CHD9-221ENST00000615216 PNMA8BQ9ULN7 279 aaPredicted RBP4.63□□□□□ -1.67
CHD9-221ENST00000615216 ANGPT4Q9Y264 503 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 FAM237AA0A1B0GTK4 181 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 CASTOR2A6NHX0 329 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 H3BRB1 525 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 ALDH2P05091 517 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 VAV1P15498 845 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 RARRES1P49788 294 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 SPIRE1Q08AE8 756 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 ITGB3BPQ13352 177 aaPredicted RBP4.63□□□□□ -1.67
CHD9-221ENST00000615216 PSTKQ8IV42 348 aaKnown RBP4.63□□□□□ -1.67
CHD9-221ENST00000615216 ZCCHC7Q8N3Z6 543 aaKnown RBP4.63□□□□□ -1.67
CHD9-221ENST00000615216 OR52L1Q8NGH7 329 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 FDXACB1Q9BRP7 624 aaPredicted RBP4.63□□□□□ -1.67
CHD9-221ENST00000615216 TUT1Q9H6E5 874 aaKnown RBP4.63□□□□□ -1.67
CHD9-221ENST00000615216 SPAG4Q9NPE6 437 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 FBXO28Q9NVF7 368 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 CLN6Q9NWW5 311 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 MTF2Q9Y483 593 aaPredicted RBP4.63□□□□□ -1.67
CHD9-221ENST00000615216 MFHAS1Q9Y4C4 1052 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 ARIH1Q9Y4X5 557 aaPredicted RBP4.63□□□□□ -1.67
CHD9-221ENST00000615216 TAF6LQ9Y6J9 622 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 SETD1AO15047 1707 aaKnown RBP4.63□□□□□ -1.67
CHD9-221ENST00000615216 SLC28A1O00337 649 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 BTN3A1O00481 513 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 SLC9A3R1O14745 358 aaPredicted RBP4.63□□□□□ -1.67
CHD9-221ENST00000615216 ZBTB14O43829 449 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 ALDH9A1P49189 494 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 TUFMP49411 452 aaKnown RBP4.63□□□□□ -1.67
CHD9-221ENST00000615216 CDC42P60953 191 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 CRY1Q16526 586 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 C2CD6Q53TS8 623 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 TYW3Q6IPR3 259 aaKnown RBP4.63□□□□□ -1.67
CHD9-221ENST00000615216 PAGE2Q7Z2X7 111 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 TMC7Q7Z402 723 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 ARHGAP22Q7Z5H3 698 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 SLC44A2Q8IWA5 706 aaPredicted RBP4.63□□□□□ -1.67
CHD9-221ENST00000615216 ZFP28Q8NHY6 868 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 ETNPPLQ8TBG4 499 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 CKAP2Q8WWK9 683 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 RIBC2Q9H4K1 309 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 CAPN10Q9HC96 672 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 PRKAG3Q9UGI9 489 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 VPS4AQ9UN37 437 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 INVSQ9Y283 1065 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 GAKO14976 1311 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 SALL3Q9BXA9 1300 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 PIPSLA2A3N6 862 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 SMNDC1O75940 238 aaKnown RBP eCLIP4.63□□□□□ -1.67
CHD9-221ENST00000615216 SLITRK3O94933 977 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 LTFP02788 710 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 LBPP18428 481 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 POLR2EP19388 210 aaKnown RBP4.63□□□□□ -1.67
CHD9-221ENST00000615216 MIPP30301 263 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 ERVK-9P63128 1117 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 CBWD6Q4V339 395 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 SETMARQ53H47 684 aaPredicted RBP4.63□□□□□ -1.67
CHD9-221ENST00000615216 KLHL17Q6TDP4 642 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 IL27RAQ6UWB1 636 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 ABRAXAS1Q6UWZ7 409 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 SLC30A10Q6XR72 485 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 SNX32Q86XE0 403 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 KBTBD8Q8NFY9 601 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 STAG3L4Q8TBR4 150 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 SKA1Q96BD8 255 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 PHF21BQ96EK2 531 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 PIGUQ9H490 435 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 FAM124BQ9H5Z6 455 aaPredicted RBP4.63□□□□□ -1.67
CHD9-221ENST00000615216 DNAJC18Q9H819 358 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 COL1A2P08123 1366 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 BCLAF3A2AJT9 711 aaKnown RBP4.63□□□□□ -1.67
CHD9-221ENST00000615216 GNRH1P01148 92 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 CCDC130P13994 396 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 INSRRP14616 1297 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 EIF2B2P49770 351 aaKnown RBP4.63□□□□□ -1.67
CHD9-221ENST00000615216 SEZ6Q53EL9 994 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 PROSER1Q86XN7 944 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 CCDC33Q8N5R6 958 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 EMC1Q8N766 993 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 TATDN2Q93075 761 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 ZBTB10Q96DT7 871 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 PPP3R2Q96LZ3 170 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 SLC38A2Q96QD8 506 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 SEPHS2Q99611 448 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 ATP13A1Q9HD20 1204 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 LEF1Q9UJU2 399 aaPredicted RBP4.63□□□□□ -1.67
CHD9-221ENST00000615216 ZNF510Q9Y2H8 683 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 GSTK1Q9Y2Q3 226 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 MANSC4A6NHS7 340 aaPredicted RBP4.63□□□□□ -1.67
CHD9-221ENST00000615216 LIASO43766 372 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 SERPINA6P08185 405 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 YBX3P16989 372 aaKnown RBP eCLIP4.63□□□□□ -1.67
CHD9-221ENST00000615216 EPHX2P34913 555 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 NOS2P35228 1153 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 RPA3P35244 121 aaPredicted RBP4.63□□□□□ -1.67
CHD9-221ENST00000615216 DRG2P55039 364 aaKnown RBP4.63□□□□□ -1.67
CHD9-221ENST00000615216 BCL2L1Q07817 233 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 PEX6Q13608 980 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 HLA-DQA1Q5Y7H0 255 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms