RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 AIF1P55008 147 aa10.76□□□□□ -0.69
CCDC9-203ENST00000596938 RPL7AP62424 266 aaKnown RBP10.76□□□□□ -0.69
CCDC9-203ENST00000596938 TPM4P67936 248 aa10.76□□□□□ -0.69
CCDC9-203ENST00000596938 CCDC15Q0P6D6 951 aa10.76□□□□□ -0.69
CCDC9-203ENST00000596938 ASIC2Q16515 512 aa10.76□□□□□ -0.69
CCDC9-203ENST00000596938 KIF19Q2TAC6 998 aa10.76□□□□□ -0.69
CCDC9-203ENST00000596938 FAM72AQ5TYM5 149 aa10.76□□□□□ -0.69
CCDC9-203ENST00000596938 SFMBT2Q5VUG0 894 aa10.76□□□□□ -0.69
CCDC9-203ENST00000596938 PLEKHA7Q6IQ23 1121 aa10.76□□□□□ -0.69
CCDC9-203ENST00000596938 FAM72DQ6L9T8 149 aa10.76□□□□□ -0.69
CCDC9-203ENST00000596938 FAM72BQ86X60 149 aa10.76□□□□□ -0.69
CCDC9-203ENST00000596938 PLPP6Q8IY26 295 aa10.76□□□□□ -0.69
CCDC9-203ENST00000596938 CCDC185Q8N715 623 aa10.76□□□□□ -0.69
CCDC9-203ENST00000596938 OR7D4Q8NG98 312 aa10.76□□□□□ -0.69
CCDC9-203ENST00000596938 OR14C36Q8NHC7 312 aa10.76□□□□□ -0.69
CCDC9-203ENST00000596938 PIP4K2CQ8TBX8 421 aa10.76□□□□□ -0.69
CCDC9-203ENST00000596938 SPON2Q9BUD6 331 aa10.76□□□□□ -0.69
CCDC9-203ENST00000596938 MAGEB5Q9BZ81 275 aa10.76□□□□□ -0.69
CCDC9-203ENST00000596938 CEP44Q9C0F1 390 aa10.76□□□□□ -0.69
CCDC9-203ENST00000596938 TTYH3Q9C0H2 523 aa10.76□□□□□ -0.69
CCDC9-203ENST00000596938 MAGEH1Q9H213 219 aa10.76□□□□□ -0.69
CCDC9-203ENST00000596938 HAUS4Q9H6D7 363 aa10.76□□□□□ -0.69
CCDC9-203ENST00000596938 GAREM1Q9H706 876 aa10.76□□□□□ -0.69
CCDC9-203ENST00000596938 PARVAQ9NVD7 372 aa10.76□□□□□ -0.69
CCDC9-203ENST00000596938 TAS2R14Q9NYV8 317 aa10.76□□□□□ -0.69
CCDC9-203ENST00000596938 ANGPTL2Q9UKU9 493 aa10.76□□□□□ -0.69
CCDC9-203ENST00000596938 ANKRD6Q9Y2G4 727 aa10.76□□□□□ -0.69
CCDC9-203ENST00000596938 PCDHGB2Q9Y5G2 931 aa10.76□□□□□ -0.69
CCDC9-203ENST00000596938 SLCO1B1Q9Y6L6 691 aa10.76□□□□□ -0.69
CCDC9-203ENST00000596938 TBC1D3DA0A087WVF3 549 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 TBC1D3IA0A087WXS9 549 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 TBC1D3EA0A087X179 549 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 TBC1D3KA0A087X1G2 549 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 TBC1D3FA6NER0 549 aaPredicted RBP10.75□□□□□ -0.69
CCDC9-203ENST00000596938 TBC1D3LB9A6J9 549 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 CBX4O00257 560 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 CCP110O43303 1012 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 PLRG1O43660 514 aaKnown RBP10.75□□□□□ -0.69
CCDC9-203ENST00000596938 SH3BP5O60239 455 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 DFNA5O60443 496 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 FTLP02792 175 aaPredicted RBP10.75□□□□□ -0.69
CCDC9-203ENST00000596938 PRNPP04156 253 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 TBC1D3HP0C7X1 549 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 DESP17661 470 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 NUDT1P36639 197 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 SERPINH1P50454 418 aaKnown RBP10.75□□□□□ -0.69
CCDC9-203ENST00000596938 METAP1P53582 386 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 FANCCQ00597 558 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 ZNF252P-AS1Q0IIN9 211 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 MAMLD1Q13495 774 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 SKOR2Q2VWA4 1001 aaPredicted RBP10.75□□□□□ -0.69
CCDC9-203ENST00000596938 TBC1D3GQ6DHY5 549 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 TBC1D3CQ6IPX1 549 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 RWDD4Q6NW29 188 aaKnown RBP10.75□□□□□ -0.69
CCDC9-203ENST00000596938 NEK5Q6P3R8 708 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 DCUN1D2Q6PH85 259 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 LINGO4Q6UY18 593 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 ZNF571Q7Z3V5 609 aaPredicted RBP10.75□□□□□ -0.69
CCDC9-203ENST00000596938 LUZP1Q86V48 1076 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 DRC7Q8IY82 874 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 TBC1D3Q8IZP1 549 aaPredicted RBP10.75□□□□□ -0.69
CCDC9-203ENST00000596938 SYN2Q92777 582 aaPredicted RBP10.75□□□□□ -0.69
CCDC9-203ENST00000596938 ISG20Q96AZ6 181 aaKnown RBP10.75□□□□□ -0.69
CCDC9-203ENST00000596938 SKA1Q96BD8 255 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 TBC1D31Q96DN5 1066 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 MCEEQ96PE7 176 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 EBF2Q9HAK2 575 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 IL21RQ9HBE5 538 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 ATP13A1Q9HD20 1204 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 TM7SF3Q9NS93 570 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 NDFIP2Q9NV92 336 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 WASF3Q9UPY6 502 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 NEU3Q9UQ49 428 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 DMTF1Q9Y222 760 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 SNX11Q9Y5W9 270 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 BZW2Q9Y6E2 419 aaKnown RBP10.75□□□□□ -0.69
CCDC9-203ENST00000596938 NUP205Q92621 2012 aa10.75□□□□□ -0.69
CCDC9-203ENST00000596938 CNOT1A5YKK6 2376 aaKnown RBP10.75□□□□□ -0.69
CCDC9-203ENST00000596938 TNRC6BQ9UPQ9 1833 aaKnown RBP10.74□□□□□ -0.69
CCDC9-203ENST00000596938 A0A1W2PQJ5 194 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 TMEM191CA6NGB0 347 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 DDX3XO00571 662 aaKnown RBP eCLIP10.74□□□□□ -0.691e-9■□□□□ 9.8
CCDC9-203ENST00000596938 BNIP3LO60238 219 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 RTN2O75298 545 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 CD160O95971 181 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 CTSLP07711 333 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 GLDCP23378 1020 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 HTR7P34969 479 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 ACVRL1P37023 503 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 PBX1P40424 430 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 CTSKP43235 329 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 RECQLP46063 649 aaPredicted RBP10.74□□□□□ -0.69
CCDC9-203ENST00000596938 UBASH3AP57075 661 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 GEMIN4P57678 1058 aaKnown RBP10.74□□□□□ -0.69
CCDC9-203ENST00000596938 SIM1P81133 766 aaPredicted RBP10.74□□□□□ -0.69
CCDC9-203ENST00000596938 ARF5P84085 180 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 KLHL30Q0D2K2 578 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 CNTN1Q12860 1018 aa10.74□□□□□ -0.69
CCDC9-203ENST00000596938 SUZ12Q15022 739 aaKnown RBP10.74□□□□□ -0.69
CCDC9-203ENST00000596938 TRIP6Q15654 476 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms