RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 METTL3Q86U44 580 aaKnown RBP15.85■□□□□ 0.13
RABGGTA-219ENST00000560871 UMODL1-AS1Q8N2C9 162 aa15.85■□□□□ 0.13
RABGGTA-219ENST00000560871 ACRBPQ8NEB7 543 aa15.85■□□□□ 0.13
RABGGTA-219ENST00000560871 RLN3Q8WXF3 142 aa15.85■□□□□ 0.13
RABGGTA-219ENST00000560871 TSC1Q92574 1164 aa15.85■□□□□ 0.13
RABGGTA-219ENST00000560871 PTPRN2Q92932 1015 aa15.85■□□□□ 0.13
RABGGTA-219ENST00000560871 LRRC19Q9H756 370 aa15.85■□□□□ 0.13
RABGGTA-219ENST00000560871 USP36Q9P275 1121 aaKnown RBP15.85■□□□□ 0.13
RABGGTA-219ENST00000560871 SUN2Q9UH99 717 aa15.85■□□□□ 0.13
RABGGTA-219ENST00000560871 BCLAF3A2AJT9 711 aaKnown RBP15.84■□□□□ 0.13
RABGGTA-219ENST00000560871 GOLGA6L3A6NEY3 463 aa15.84■□□□□ 0.13
RABGGTA-219ENST00000560871 GOLGA6L6A8MZA4 724 aa15.84■□□□□ 0.13
RABGGTA-219ENST00000560871 SLC30A4O14863 429 aa15.84■□□□□ 0.13
RABGGTA-219ENST00000560871 CD48P09326 243 aa15.84■□□□□ 0.13
RABGGTA-219ENST00000560871 NNMTP40261 264 aa15.84■□□□□ 0.13
RABGGTA-219ENST00000560871 CLCN6P51797 869 aa15.84■□□□□ 0.13
RABGGTA-219ENST00000560871 YBEYP58557 167 aaPredicted RBP15.84■□□□□ 0.13
RABGGTA-219ENST00000560871 POLD3Q15054 466 aaPredicted RBP15.84■□□□□ 0.13
RABGGTA-219ENST00000560871 HADHQ16836 314 aaKnown RBP15.84■□□□□ 0.13
RABGGTA-219ENST00000560871 AFMIDQ63HM1 303 aa15.84■□□□□ 0.13
RABGGTA-219ENST00000560871 IL31Q6EBC2 164 aa15.84■□□□□ 0.13
RABGGTA-219ENST00000560871 LINGO4Q6UY18 593 aa15.84■□□□□ 0.13
RABGGTA-219ENST00000560871 TMPRSS6Q8IU80 811 aa15.84■□□□□ 0.13
RABGGTA-219ENST00000560871 ARHGAP12Q8IWW6 846 aa15.84■□□□□ 0.13
RABGGTA-219ENST00000560871 PGBD3Q8N328 593 aa15.84■□□□□ 0.13
RABGGTA-219ENST00000560871 NPWQ8N729 165 aa15.84■□□□□ 0.13
RABGGTA-219ENST00000560871 CSPG4P5Q96PW8 444 aa15.84■□□□□ 0.13
RABGGTA-219ENST00000560871 SPON2Q9BUD6 331 aa15.84■□□□□ 0.13
RABGGTA-219ENST00000560871 RSPH9Q9H1X1 276 aaPredicted RBP15.84■□□□□ 0.13
RABGGTA-219ENST00000560871 PRDM16Q9HAZ2 1276 aa15.84■□□□□ 0.13
RABGGTA-219ENST00000560871 LUC7LQ9NQ29 371 aaKnown RBP15.84■□□□□ 0.13
RABGGTA-219ENST00000560871 VPS45Q9NRW7 570 aa15.84■□□□□ 0.13
RABGGTA-219ENST00000560871 RCOR3Q9P2K3 495 aaPredicted RBP15.84■□□□□ 0.13
RABGGTA-219ENST00000560871 SALL4Q9UJQ4 1053 aa15.84■□□□□ 0.13
RABGGTA-219ENST00000560871 IGHV1OR15-9A0A0B4J2B8 117 aa15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 TMEM110-MUSTN1A8MSY1 372 aa15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 RASA4BC9J798 803 aa15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 H3BRJ5 948 aa15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 K7ERQ8 282 aa15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 CBX4O00257 560 aa15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 PJA2O43164 708 aa15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 RASA4O43374 803 aa15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 IPO7O95373 1038 aaKnown RBP15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 IGLV3-19P01714 112 aa15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 IL4RP24394 825 aa15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 GJC1P36383 396 aa15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 SERPINH1P50454 418 aaKnown RBP15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 VAV2P52735 878 aa15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 NDST2P52849 883 aa15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 RPS14P62263 151 aaKnown RBP15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 CREB5Q02930 508 aa15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 BYSLQ13895 437 aaKnown RBP15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 DLG2Q15700 870 aa15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 PARP15Q460N3 678 aa15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 ATP13A4Q4VNC1 1196 aa15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 RETSATQ6NUM9 610 aa15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 C22orf39Q6P5X5 142 aa15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 KIAA1324Q6UXG2 1013 aaKnown RBP15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 Q6ZVU0 165 aa15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 CACUL1Q86Y37 369 aa15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 FRMD1Q8N878 549 aa15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 C12orf50Q8NA57 414 aaPredicted RBP15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 ATP11CQ8NB49 1132 aa15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 PRCCQ92733 491 aaPredicted RBP15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 SIPA1Q96FS4 1042 aa15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 HMCESQ96FZ2 354 aa15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 SPACA7Q96KW9 195 aa15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 DONSONQ9NYP3 566 aa15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 MBD1Q9UIS9 605 aaPredicted RBP15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 MFHAS1Q9Y4C4 1052 aa15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 ACTL7AQ9Y615 435 aa15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 SDK1Q7Z5N4 2213 aa15.83■□□□□ 0.12
RABGGTA-219ENST00000560871 CEP250Q9BV73 2442 aa15.82■□□□□ 0.12
RABGGTA-219ENST00000560871 BTNL10A8MVZ5 291 aa15.82■□□□□ 0.12
RABGGTA-219ENST00000560871 ZBTB24O43167 697 aaPredicted RBP15.82■□□□□ 0.12
RABGGTA-219ENST00000560871 SMAD6O43541 496 aaKnown RBP15.82■□□□□ 0.12
RABGGTA-219ENST00000560871 KDELR3O43731 214 aa15.82■□□□□ 0.12
RABGGTA-219ENST00000560871 BUB1BO60566 1050 aaPredicted RBP15.82■□□□□ 0.12
RABGGTA-219ENST00000560871 ZNF217O75362 1048 aa15.82■□□□□ 0.12
RABGGTA-219ENST00000560871 ZNF821O75541 412 aaPredicted RBP15.82■□□□□ 0.12
RABGGTA-219ENST00000560871 KRT7P08729 469 aa15.82■□□□□ 0.12
RABGGTA-219ENST00000560871 ARL4AP40617 200 aa15.82■□□□□ 0.12
RABGGTA-219ENST00000560871 SLC1A1P43005 524 aa15.82■□□□□ 0.12
RABGGTA-219ENST00000560871 SSR1P43307 286 aaKnown RBP15.82■□□□□ 0.12
RABGGTA-219ENST00000560871 LIMK1P53667 647 aa15.82■□□□□ 0.12
RABGGTA-219ENST00000560871 CDH6P55285 790 aa15.82■□□□□ 0.12
RABGGTA-219ENST00000560871 DPYSL3Q14195 570 aa15.82■□□□□ 0.12
RABGGTA-219ENST00000560871 ELAVL3Q14576 367 aaKnown RBP15.82■□□□□ 0.12
RABGGTA-219ENST00000560871 AASDHQ4L235 1098 aaPredicted RBP15.82■□□□□ 0.12
RABGGTA-219ENST00000560871 ZNF776Q68DI1 518 aaPredicted RBP15.82■□□□□ 0.12
RABGGTA-219ENST00000560871 FAF2Q96CS3 445 aa15.82■□□□□ 0.12
RABGGTA-219ENST00000560871 CELF6Q96J87 481 aaKnown RBP15.82■□□□□ 0.12
RABGGTA-219ENST00000560871 FAM129BQ96TA1 746 aa15.82■□□□□ 0.12
RABGGTA-219ENST00000560871 ZNF670Q9BS34 389 aa15.82■□□□□ 0.12
RABGGTA-219ENST00000560871 SLC39A8Q9C0K1 460 aa15.82■□□□□ 0.12
RABGGTA-219ENST00000560871 LACRTQ9GZZ8 138 aa15.82■□□□□ 0.12
RABGGTA-219ENST00000560871 SMOC1Q9H4F8 434 aa15.82■□□□□ 0.12
RABGGTA-219ENST00000560871 PDFQ9HBH1 243 aa15.82■□□□□ 0.12
RABGGTA-219ENST00000560871 ITM2CQ9NQX7 267 aa15.82■□□□□ 0.12
RABGGTA-219ENST00000560871 RXFP3Q9NSD7 469 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms