RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 SNAP91O60641 907 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 LRIG2O94898 1065 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 GJB6O95452 261 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 MT-CO1P00395 513 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 PRNPP04156 253 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 IGHV4-34P06331 123 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 VAV1P15498 845 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 RRM1P23921 792 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 NUDT1P36639 197 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 RECQLP46063 649 aaPredicted RBP13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 NUMBP49757 651 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 RPL7AP62424 266 aaKnown RBP13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 RACK1P63244 317 aaKnown RBP13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 KLHL30Q0D2K2 578 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 N4BP2L1Q5TBK1 243 aaPredicted RBP13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 PLEKHA7Q6IQ23 1121 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 NCEH1Q6PIU2 408 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 Q6ZVU0 165 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 PIP4P1Q86T03 277 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 CCDC185Q8N715 623 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 OR14C36Q8NHC7 312 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 PIP4K2CQ8TBX8 421 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 SYN2Q92777 582 aaPredicted RBP13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 TRIM11Q96F44 468 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 SPON2Q9BUD6 331 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 TM9SF3Q9HD45 589 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 FSCN3Q9NQT6 498 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 HPCAL4Q9UM19 191 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 CABIN1Q9Y6J0 2220 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 TBC1D3DA0A087WVF3 549 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 TBC1D3IA0A087WXS9 549 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 TBC1D3EA0A087X179 549 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 TBC1D3KA0A087X1G2 549 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 TBC1D3FA6NER0 549 aaPredicted RBP13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 FAM47DPA6NHR8 397 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 EIF3CLB5ME19 914 aaKnown RBP13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 C10orf142B7Z368 130 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 TBC1D3LB9A6J9 549 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 CCP110O43303 1012 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 RTN2O75298 545 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 GJB3O75712 270 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 ZMPSTE24O75844 475 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 TPM3P06753 285 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 TBC1D3HP0C7X1 549 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 MYBL1P10243 752 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 CHRNA3P32297 505 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 HTR7P34969 479 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 DRD3P35462 400 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 ADPRHP54922 357 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 MAMLD1Q13495 774 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 ZSCAN23Q3MJ62 389 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 RAB6CQ53S08 254 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 TBC1D3GQ6DHY5 549 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 TBC1D3CQ6IPX1 549 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 SCYL2Q6P3W7 929 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 ZNF571Q7Z3V5 609 aaPredicted RBP13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 VPS36Q86VN1 386 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 NLRP14Q86W24 1093 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 PLPP6Q8IY26 295 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 DRC7Q8IY82 874 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 TBC1D3Q8IZP1 549 aaPredicted RBP13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 PCDH20Q8N6Y1 951 aaKnown RBP13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 OR7D4Q8NG98 312 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 OR2A12Q8NGT7 310 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 ISG20Q96AZ6 181 aaKnown RBP13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 EIF3CQ99613 913 aaKnown RBP13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 EPAS1Q99814 870 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 NCAPGQ9BPX3 1015 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 ACE2Q9BYF1 805 aaPredicted RBP13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 RAB6CQ9H0N0 254 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 GAREM1Q9H706 876 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 MRPL47Q9HD33 250 aaKnown RBP13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 SARDHQ9UL12 918 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 SCINQ9Y6U3 715 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 ACACBO00763 2458 aa13.44□□□□□ -0.26
HNRNPC-205ENST00000553300 CHD5Q8TDI0 1954 aa13.44□□□□□ -0.26
HNRNPC-205ENST00000553300 TMCO5BA8MYB1 307 aa13.44□□□□□ -0.26
HNRNPC-205ENST00000553300 FAM72CH0Y354 149 aa13.44□□□□□ -0.26
HNRNPC-205ENST00000553300 BNIP3LO60238 219 aa13.44□□□□□ -0.26
HNRNPC-205ENST00000553300 DFNA5O60443 496 aa13.44□□□□□ -0.26
HNRNPC-205ENST00000553300 RAMP2O60895 175 aa13.44□□□□□ -0.26
HNRNPC-205ENST00000553300 FTLP02792 175 aaPredicted RBP13.44□□□□□ -0.26
HNRNPC-205ENST00000553300 CD59P13987 128 aa13.44□□□□□ -0.26
HNRNPC-205ENST00000553300 PBX1P40424 430 aa13.44□□□□□ -0.26
HNRNPC-205ENST00000553300 CSNK1EP49674 416 aaKnown RBP13.44□□□□□ -0.26
HNRNPC-205ENST00000553300 SERPINH1P50454 418 aaKnown RBP13.44□□□□□ -0.26
HNRNPC-205ENST00000553300 SUZ12Q15022 739 aaKnown RBP13.44□□□□□ -0.26
HNRNPC-205ENST00000553300 HLA-BQ31612 363 aa13.44□□□□□ -0.26
HNRNPC-205ENST00000553300 FAM72AQ5TYM5 149 aa13.44□□□□□ -0.26
HNRNPC-205ENST00000553300 FAM72DQ6L9T8 149 aa13.44□□□□□ -0.26
HNRNPC-205ENST00000553300 NEK5Q6P3R8 708 aa13.44□□□□□ -0.26
HNRNPC-205ENST00000553300 TMC6Q7Z403 805 aa13.44□□□□□ -0.26
HNRNPC-205ENST00000553300 ADAT2Q7Z6V5 191 aaKnown RBP13.44□□□□□ -0.26
HNRNPC-205ENST00000553300 FAM72BQ86X60 149 aa13.44□□□□□ -0.26
HNRNPC-205ENST00000553300 DEFB124Q8NES8 71 aa13.44□□□□□ -0.26
HNRNPC-205ENST00000553300 FNIP1Q8TF40 1166 aa13.44□□□□□ -0.26
HNRNPC-205ENST00000553300 PPP1R16AQ96I34 528 aa13.44□□□□□ -0.26
HNRNPC-205ENST00000553300 ORAI3Q9BRQ5 295 aa13.44□□□□□ -0.26
HNRNPC-205ENST00000553300 CATSPERBQ9H7T0 1116 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms