RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 MAST4O15021 2626 aa12.18□□□□□ -0.46
GABPB1-206ENST00000543881 CNTN5O94779 1100 aa12.18□□□□□ -0.46
GABPB1-206ENST00000543881 UCHL3P15374 230 aa12.18□□□□□ -0.46
GABPB1-206ENST00000543881 DRD3P35462 400 aa12.18□□□□□ -0.46
GABPB1-206ENST00000543881 GABRB2P47870 512 aa12.18□□□□□ -0.46
GABPB1-206ENST00000543881 RXRGP48443 463 aa12.18□□□□□ -0.46
GABPB1-206ENST00000543881 CXCR3P49682 368 aa12.18□□□□□ -0.46
GABPB1-206ENST00000543881 BPIFB4P59827 614 aa12.18□□□□□ -0.46
GABPB1-206ENST00000543881 ALFQ53S48 1182 aa12.18□□□□□ -0.46
GABPB1-206ENST00000543881 TCP11X2Q5H9J9 407 aa12.18□□□□□ -0.46
GABPB1-206ENST00000543881 TAF3Q5VWG9 929 aa12.18□□□□□ -0.46
GABPB1-206ENST00000543881 TRNP1Q6NT89 227 aa12.18□□□□□ -0.46
GABPB1-206ENST00000543881 KDM7AQ6ZMT4 941 aa12.18□□□□□ -0.46
GABPB1-206ENST00000543881 NOP9Q86U38 636 aaKnown RBP12.18□□□□□ -0.46
GABPB1-206ENST00000543881 XYLT1Q86Y38 959 aa12.18□□□□□ -0.46
GABPB1-206ENST00000543881 OXR1Q8N573 874 aa12.18□□□□□ -0.46
GABPB1-206ENST00000543881 TMEM35BQ8NCS4 154 aa12.18□□□□□ -0.46
GABPB1-206ENST00000543881 ZNF248Q8NDW4 579 aa12.18□□□□□ -0.46
GABPB1-206ENST00000543881 NAF1Q96HR8 494 aaKnown RBP12.18□□□□□ -0.46
GABPB1-206ENST00000543881 TKTL2Q9H0I9 626 aa12.18□□□□□ -0.46
GABPB1-206ENST00000543881 SIK2Q9H0K1 926 aa12.18□□□□□ -0.46
GABPB1-206ENST00000543881 ERVMER34-1Q9H9K5 563 aa12.18□□□□□ -0.46
GABPB1-206ENST00000543881 TMPRSS4Q9NRS4 437 aa12.18□□□□□ -0.46
GABPB1-206ENST00000543881 LMBRD1Q9NUN5 540 aa12.18□□□□□ -0.46
GABPB1-206ENST00000543881 ARHGEF38Q9NXL2 777 aa12.18□□□□□ -0.46
GABPB1-206ENST00000543881 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.18□□□□□ -0.46
GABPB1-206ENST00000543881 DACH1Q9UI36 760 aa12.18□□□□□ -0.46
GABPB1-206ENST00000543881 FZD4Q9ULV1 537 aa12.18□□□□□ -0.46
GABPB1-206ENST00000543881 COL6A6A6NMZ7 2263 aa12.17□□□□□ -0.46
GABPB1-206ENST00000543881 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.17□□□□□ -0.46
GABPB1-206ENST00000543881 PES1O00541 588 aaKnown RBP12.17□□□□□ -0.46
GABPB1-206ENST00000543881 MMEP08473 750 aa12.17□□□□□ -0.46
GABPB1-206ENST00000543881 GOT1P17174 413 aa12.17□□□□□ -0.46
GABPB1-206ENST00000543881 C5AR1P21730 350 aa12.17□□□□□ -0.46
GABPB1-206ENST00000543881 ACP1P24666 158 aa12.17□□□□□ -0.46
GABPB1-206ENST00000543881 KLK7P49862 253 aa12.17□□□□□ -0.46
GABPB1-206ENST00000543881 VASPP50552 380 aaPredicted RBP12.17□□□□□ -0.46
GABPB1-206ENST00000543881 ADPRHP54922 357 aa12.17□□□□□ -0.46
GABPB1-206ENST00000543881 SNX16P57768 344 aa12.17□□□□□ -0.46
GABPB1-206ENST00000543881 RHDQ02161 417 aa12.17□□□□□ -0.46
GABPB1-206ENST00000543881 SULT2A1Q06520 285 aa12.17□□□□□ -0.46
GABPB1-206ENST00000543881 ZNF177Q13360 481 aaPredicted RBP12.17□□□□□ -0.46
GABPB1-206ENST00000543881 ELAVL3Q14576 367 aaKnown RBP12.17□□□□□ -0.46
GABPB1-206ENST00000543881 BROXQ5VW32 411 aa12.17□□□□□ -0.46
GABPB1-206ENST00000543881 CLEC17AQ6ZS10 378 aa12.17□□□□□ -0.46
GABPB1-206ENST00000543881 KANSL1Q7Z3B3 1105 aa12.17□□□□□ -0.46
GABPB1-206ENST00000543881 ZDHHC17Q8IUH5 632 aa12.17□□□□□ -0.46
GABPB1-206ENST00000543881 OR14C36Q8NHC7 312 aa12.17□□□□□ -0.46
GABPB1-206ENST00000543881 C18orf8Q96DM3 657 aa12.17□□□□□ -0.46
GABPB1-206ENST00000543881 PGAP3Q96FM1 320 aaPredicted RBP12.17□□□□□ -0.46
GABPB1-206ENST00000543881 WBP1Q96G27 269 aa12.17□□□□□ -0.46
GABPB1-206ENST00000543881 TBCBQ99426 244 aa12.17□□□□□ -0.46
GABPB1-206ENST00000543881 PSMB7Q99436 277 aa12.17□□□□□ -0.46
GABPB1-206ENST00000543881 GANQ9H2C0 597 aa12.17□□□□□ -0.46
GABPB1-206ENST00000543881 PDCL3Q9H2J4 239 aa12.17□□□□□ -0.46
GABPB1-206ENST00000543881 WDCPQ9H6R7 721 aa12.17□□□□□ -0.46
GABPB1-206ENST00000543881 TAB2Q9NYJ8 693 aa12.17□□□□□ -0.46
GABPB1-206ENST00000543881 SARDHQ9UL12 918 aa12.17□□□□□ -0.46
GABPB1-206ENST00000543881 TBC1D30Q9Y2I9 924 aa12.17□□□□□ -0.46
GABPB1-206ENST00000543881 F8VZ95 297 aa12.16□□□□□ -0.46
GABPB1-206ENST00000543881 ATP9BO43861 1147 aa12.16□□□□□ -0.46
GABPB1-206ENST00000543881 CLDN11O75508 207 aa12.16□□□□□ -0.46
GABPB1-206ENST00000543881 ADH1BP00325 375 aa12.16□□□□□ -0.46
GABPB1-206ENST00000543881 MT-CO3P00414 261 aa12.16□□□□□ -0.46
GABPB1-206ENST00000543881 IL1BP01584 269 aa12.16□□□□□ -0.46
GABPB1-206ENST00000543881 FLT3P36888 993 aa12.16□□□□□ -0.46
GABPB1-206ENST00000543881 SCNN1AP37088 669 aa12.16□□□□□ -0.46
GABPB1-206ENST00000543881 NNMTP40261 264 aa12.16□□□□□ -0.46
GABPB1-206ENST00000543881 SULT1E1P49888 294 aa12.16□□□□□ -0.46
GABPB1-206ENST00000543881 OXCT1P55809 520 aa12.16□□□□□ -0.46
GABPB1-206ENST00000543881 PCBP4P57723 403 aaKnown RBP12.16□□□□□ -0.46
GABPB1-206ENST00000543881 TMPRSS3P57727 454 aa12.16□□□□□ -0.46
GABPB1-206ENST00000543881 PPP2CBP62714 309 aa12.16□□□□□ -0.46
GABPB1-206ENST00000543881 PPP2CAP67775 309 aa12.16□□□□□ -0.46
GABPB1-206ENST00000543881 E2F1Q01094 437 aa12.16□□□□□ -0.46
GABPB1-206ENST00000543881 PROX2Q3B8N5 592 aa12.16□□□□□ -0.46
GABPB1-206ENST00000543881 BRMS1LQ5PSV4 323 aa12.16□□□□□ -0.46
GABPB1-206ENST00000543881 FAM102AQ5T9C2 384 aaPredicted RBP12.16□□□□□ -0.46
GABPB1-206ENST00000543881 ARHGAP40Q5TG30 622 aa12.16□□□□□ -0.46
GABPB1-206ENST00000543881 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.16□□□□□ -0.46
GABPB1-206ENST00000543881 SND1Q7KZF4 910 aaKnown RBP eCLIP12.16□□□□□ -0.46
GABPB1-206ENST00000543881 BNIPLQ7Z465 357 aa12.16□□□□□ -0.46
GABPB1-206ENST00000543881 SPATS2Q86XZ4 545 aaKnown RBP12.16□□□□□ -0.46
GABPB1-206ENST00000543881 MFSD2AQ8NA29 543 aa12.16□□□□□ -0.46
GABPB1-206ENST00000543881 EPS8L1Q8TE68 723 aa12.16□□□□□ -0.46
GABPB1-206ENST00000543881 FAM131CQ96AQ9 280 aa12.16□□□□□ -0.46
GABPB1-206ENST00000543881 SPAG5Q96R06 1193 aa12.16□□□□□ -0.46
GABPB1-206ENST00000543881 STK33Q9BYT3 514 aa12.16□□□□□ -0.46
GABPB1-206ENST00000543881 CPNE5Q9HCH3 593 aa12.16□□□□□ -0.46
GABPB1-206ENST00000543881 RRN3Q9NYV6 651 aa12.16□□□□□ -0.46
GABPB1-206ENST00000543881 TMEM59LQ9UK28 342 aa12.16□□□□□ -0.46
GABPB1-206ENST00000543881 TPX2Q9ULW0 747 aaKnown RBP12.16□□□□□ -0.46
GABPB1-206ENST00000543881 MYO18BQ8IUG5 2567 aa12.16□□□□□ -0.46
GABPB1-206ENST00000543881 TBC1D3DA0A087WVF3 549 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 TBC1D3IA0A087WXS9 549 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 TBC1D3EA0A087X179 549 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 TBC1D3KA0A087X1G2 549 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 TBC1D3FA6NER0 549 aaPredicted RBP12.15□□□□□ -0.46
GABPB1-206ENST00000543881 DRGXA6NNA5 263 aa12.15□□□□□ -0.46
GABPB1-206ENST00000543881 TBC1D3LB9A6J9 549 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms