RNA–Protein interactions for RNA: ENST00000539890.1

CYB561A3-213, Transcript of cytochrome b561 family member A3, humanhuman

TSL 4 BASIC

Gene CYB561A3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-213ENST00000539890 RSPH9Q9H1X1 276 aaPredicted RBP12.8□□□□□ -0.36
CYB561A3-213ENST00000539890 GRPEL1Q9HAV7 217 aa12.8□□□□□ -0.36
CYB561A3-213ENST00000539890 NDFIP2Q9NV92 336 aa12.8□□□□□ -0.36
CYB561A3-213ENST00000539890 CWC15Q9P013 229 aaKnown RBP12.8□□□□□ -0.36
CYB561A3-213ENST00000539890 HS3ST2Q9Y278 367 aa12.8□□□□□ -0.36
CYB561A3-213ENST00000539890 RNASEH2AO75792 299 aaKnown RBP12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 MT-CO1P00395 513 aa12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 GLDCP23378 1020 aa12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 SERPINH1P50454 418 aaKnown RBP12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 RAD51Q06609 339 aa12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 KIF5AQ12840 1032 aa12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 SEMA3BQ13214 749 aa12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 CST6Q15828 149 aa12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 IFI16Q16666 785 aaKnown RBP12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 SPDYCQ5MJ68 293 aa12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 LEKR1Q6ZMV7 388 aa12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 Q6ZVU0 165 aa12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 ARMCX6Q7L4S7 300 aa12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 POLNQ7Z5Q5 900 aa12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 RHOT1Q8IXI2 618 aa12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 RGL4Q8IZJ4 473 aa12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 DEFB119Q8N690 84 aa12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 PAF1Q8N7H5 531 aa12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 CASKIN2Q8WXE0 1202 aa12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 PTPRN2Q92932 1015 aa12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 FOXJ1Q92949 421 aa12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 HMCESQ96FZ2 354 aa12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 TOE1Q96GM8 510 aaKnown RBP12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 MYO19Q96H55 970 aa12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 CELF6Q96J87 481 aaKnown RBP12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 ACE2Q9BYF1 805 aaPredicted RBP12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 CEP44Q9C0F1 390 aa12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 BTBD1Q9H0C5 482 aa12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 DUSP15Q9H1R2 295 aaPredicted RBP12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 ARRDC1-AS1Q9H2J1 176 aa12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 TNKS2Q9H2K2 1166 aa12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 SP110Q9HB58 689 aa12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 FBXL12Q9NXK8 326 aa12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 ZNF212Q9UDV6 495 aa12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 WDFY4Q6ZS81 3184 aa12.79□□□□□ -0.36
CYB561A3-213ENST00000539890 IGHV1OR15-9A0A0B4J2B8 117 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 CXorf51AA0A1B0GTR3 108 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 FAM47DPA6NHR8 397 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 MEI4A8MW99 385 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 K7ERQ8 282 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 MCF2LO15068 1137 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 ALOX15BO15296 676 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 MTA2O94776 668 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 PRNPP04156 253 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 TCF4P15884 667 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 C5AR1P21730 350 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 BCKDHBP21953 392 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 AMPD1P23109 780 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 DPP6P42658 865 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 PAPOLAP51003 745 aaKnown RBP12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 SNRPD1P62314 119 aaKnown RBP12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 SLC25A11Q02978 314 aaKnown RBP12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 SERINC3Q13530 473 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 CARD16Q5EG05 197 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 WDR45BQ5MNZ6 344 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 LYSMD4Q5XG99 296 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 PMS2CLQ68D20 193 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 C22orf39Q6P5X5 142 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 CYP2U1Q7Z449 544 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 DAAM2Q86T65 1068 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 BBS5Q8N3I7 341 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 HDDC3Q8N4P3 179 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 PCDH20Q8N6Y1 951 aaKnown RBP12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 FRMD1Q8N878 549 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 FRS2Q8WU20 508 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 PIGKQ92643 395 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 PPP1R16AQ96I34 528 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 CSPG4P5Q96PW8 444 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 GPR174Q9BXC1 333 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 PABPC3Q9H361 631 aaKnown RBP12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 SGK2Q9HBY8 427 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 PCDH18Q9HCL0 1135 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 CD248Q9HCU0 757 aa12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 DDX56Q9NY93 547 aaKnown RBP12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 RCOR3Q9P2K3 495 aaPredicted RBP12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 UBA2Q9UBT2 640 aaPredicted RBP12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 FCF1Q9Y324 198 aaKnown RBP12.78□□□□□ -0.36
CYB561A3-213ENST00000539890 A0A0A6YYK5 440 aaPredicted RBP12.77□□□□□ -0.37
CYB561A3-213ENST00000539890 A0A1W2PP55 124 aa12.77□□□□□ -0.37
CYB561A3-213ENST00000539890 LRRD1A4D1F6 860 aa12.77□□□□□ -0.37
CYB561A3-213ENST00000539890 LRRC72A6NJI9 287 aa12.77□□□□□ -0.37
CYB561A3-213ENST00000539890 KPNA3O00505 521 aaPredicted RBP12.77□□□□□ -0.37
CYB561A3-213ENST00000539890 MID1O15344 667 aa12.77□□□□□ -0.37
CYB561A3-213ENST00000539890 SMAD6O43541 496 aaKnown RBP12.77□□□□□ -0.37
CYB561A3-213ENST00000539890 FOXD2O60548 495 aaPredicted RBP12.77□□□□□ -0.37
CYB561A3-213ENST00000539890 PALMO75781 387 aa12.77□□□□□ -0.37
CYB561A3-213ENST00000539890 NEBLO76041 1014 aa12.77□□□□□ -0.37
CYB561A3-213ENST00000539890 VAV1P15498 845 aa12.77□□□□□ -0.37
CYB561A3-213ENST00000539890 COMTP21964 271 aa12.77□□□□□ -0.37
CYB561A3-213ENST00000539890 CHRNA3P32297 505 aa12.77□□□□□ -0.37
CYB561A3-213ENST00000539890 RHOAP61586 193 aa12.77□□□□□ -0.37
CYB561A3-213ENST00000539890 ARF5P84085 180 aa12.77□□□□□ -0.37
CYB561A3-213ENST00000539890 ZNF33AQ06730 810 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 171.8 ms