RNA–Protein interactions for RNA: ENST00000528235.5

CHKA-204, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-204ENST00000528235 USP8P40818 1118 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 ARRB1P49407 418 aaPredicted RBP5.71□□□□□ -1.5
CHKA-204ENST00000528235 BCAT1P54687 386 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 ERVPABLB-1P60509 514 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 GABREP78334 506 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 CBX1P83916 185 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 DAB2P98082 770 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 TFAMQ00059 246 aaKnown RBP5.71□□□□□ -1.5
CHKA-204ENST00000528235 E2F1Q01094 437 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 ID3Q02535 119 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 GOLGA8FQ08AF8 430 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 GOLGA8DPQ0D2H9 430 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 GNL2Q13823 731 aaKnown RBP5.71□□□□□ -1.5
CHKA-204ENST00000528235 CCDC142Q17RM4 750 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 TTC38Q5R3I4 469 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 ACBD5Q5T8D3 534 aaPredicted RBP5.71□□□□□ -1.5
CHKA-204ENST00000528235 SLFN12LQ6IEE8 588 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 LEKR1Q6ZMV7 388 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 CCDC80Q76M96 950 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 SND1Q7KZF4 910 aaKnown RBP eCLIP5.71□□□□□ -1.5
CHKA-204ENST00000528235 DPH6Q7L8W6 267 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 OSTM1Q86WC4 334 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 LRRC49Q8IUZ0 686 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 CCDC83Q8IWF9 413 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 ELOA2Q8IYF1 753 aaPredicted RBP5.71□□□□□ -1.5
CHKA-204ENST00000528235 MYO1HQ8N1T3 1032 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 MYCT1Q8N699 235 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 CSGALNACT2Q8N6G5 542 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 OVCA2Q8WZ82 227 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 FBXO32Q969P5 355 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 CCDC74AQ96AQ1 378 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 BIRC7Q96CA5 298 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 MMS19Q96T76 1030 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 PKMYT1Q99640 499 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 CRACR2AQ9BSW2 395 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.71□□□□□ -1.5
CHKA-204ENST00000528235 TRIM9Q9C026 710 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 BRINP2Q9C0B6 783 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 LHX5Q9H2C1 402 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 THSD1Q9NS62 852 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 EXOC1Q9NV70 894 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 KCND2Q9NZV8 630 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 THAP10Q9P2Z0 257 aaPredicted RBP5.71□□□□□ -1.5
CHKA-204ENST00000528235 CHORDC1Q9UHD1 332 aaPredicted RBP5.71□□□□□ -1.5
CHKA-204ENST00000528235 ITGB1BP2Q9UKP3 347 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 AGO2Q9UKV8 859 aaKnown RBP5.71□□□□□ -1.5
CHKA-204ENST00000528235 TMA7Q9Y2S6 64 aaKnown RBP5.71□□□□□ -1.5
CHKA-204ENST00000528235 SLCO1B1Q9Y6L6 691 aa5.71□□□□□ -1.5
CHKA-204ENST00000528235 RP1P56715 2156 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 K7ENP7 123 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 EIF1AYO14602 144 aaKnown RBP5.7□□□□□ -1.5
CHKA-204ENST00000528235 GABRDO14764 452 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 VILLO15195 856 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 USP12O75317 370 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 KRT38O76015 456 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 PIGRP01833 764 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 DNTTP04053 509 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 KRT18P05783 430 aaKnown RBP5.7□□□□□ -1.5
CHKA-204ENST00000528235 CISD3P0C7P0 127 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 FAM87AP0C7U9 286 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 FDPSP14324 419 aaKnown RBP5.7□□□□□ -1.5
CHKA-204ENST00000528235 PLCG1P19174 1290 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 CD53P19397 219 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 LMO2P25791 158 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 RBMS1P29558 406 aaKnown RBP5.7□□□□□ -1.5
CHKA-204ENST00000528235 SERPINB4P48594 390 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 CLK1P49759 484 aaKnown RBP5.7□□□□□ -1.5
CHKA-204ENST00000528235 COPAP53621 1224 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 RACK1P63244 317 aaKnown RBP5.7□□□□□ -1.5
CHKA-204ENST00000528235 RBP5P82980 135 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 NFKB2Q00653 900 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 DEUP1Q05D60 604 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 SERINC3Q13530 473 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 TERF2Q15554 542 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 ZSCAN23Q3MJ62 389 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 SLC45A4Q5BKX6 768 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 DNAJC21Q5F1R6 531 aaKnown RBP5.7□□□□□ -1.5
CHKA-204ENST00000528235 KCNT1Q5JUK3 1230 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 TTC19Q6DKK2 380 aaPredicted RBP5.7□□□□□ -1.5
CHKA-204ENST00000528235 INO80CQ6PI98 192 aaPredicted RBP5.7□□□□□ -1.5
CHKA-204ENST00000528235 SERPINA13PQ6UXR4 307 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 HTR3DQ70Z44 454 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 SDCCAG8Q86SQ7 713 aaPredicted RBP5.7□□□□□ -1.5
CHKA-204ENST00000528235 SMYD4Q8IYR2 804 aaPredicted RBP5.7□□□□□ -1.5
CHKA-204ENST00000528235 NUP93Q8N1F7 819 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 LRRC52Q8N7C0 313 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 DCBLD1Q8N8Z6 715 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 SYT2Q8N9I0 419 aaPredicted RBP5.7□□□□□ -1.5
CHKA-204ENST00000528235 NSUN7Q8NE18 718 aaKnown RBP5.7□□□□□ -1.5
CHKA-204ENST00000528235 OR2T3Q8NH03 318 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 FAM76AQ8TAV0 307 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 MYCBPAPQ8TBZ2 947 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 MIPOL1Q8TD10 442 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 SAP25Q8TEE9 199 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 GANCQ8TET4 914 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 NOC3LQ8WTT2 800 aaKnown RBP5.7□□□□□ -1.5
CHKA-204ENST00000528235 FRS2Q8WU20 508 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 RFFLQ8WZ73 363 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 POMGNT1Q8WZA1 660 aa5.7□□□□□ -1.5
CHKA-204ENST00000528235 PCED1BQ96HM7 432 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms