RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 SARDHQ9UL12 918 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 NCKAP1Q9Y2A7 1128 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 ACTL7AQ9Y615 435 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 SLCO1B1Q9Y6L6 691 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 PLXND1Q9Y4D7 1925 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 TNRC6BQ9UPQ9 1833 aaKnown RBP8.47□□□□□ -1.05
HDAC6-221ENST00000477561 CEP192Q8TEP8 1941 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 SSU72P8A0A1W2PR75 194 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 ILVBLA1L0T0 632 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 SOWAHDA6NJG2 315 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 HAX1O00165 279 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 CBX4O00257 560 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 TM4SF5O14894 197 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 ATP9BO43861 1147 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 RTN2O75298 545 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 LRIG2O94898 1065 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 SERPING1P05155 500 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 CCDC175P0C221 793 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 PYGBP11216 843 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 GNSP15586 552 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 PSMA2P25787 234 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 ACVRL1P37023 503 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 PRKCIP41743 596 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 DPP6P42658 865 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 MAMLD1Q13495 774 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 TDRD12Q587J7 1177 aaKnown RBP8.47□□□□□ -1.05
HDAC6-221ENST00000477561 ACBD5Q5T8D3 534 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-221ENST00000477561 MANEALQ5VSG8 457 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 DAB2IPQ5VWQ8 1189 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 HGSNATQ68CP4 663 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-221ENST00000477561 LEKR1Q6ZMV7 388 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 SLFN11Q7Z7L1 901 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 SETD3Q86TU7 594 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-221ENST00000477561 VPS36Q86VN1 386 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 AADATQ8N5Z0 425 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 DNASE2BQ8WZ79 361 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 OR8D1Q8WZ84 308 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 RNF25Q96BH1 459 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-221ENST00000477561 BIRC7Q96CA5 298 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 ZNF653Q96CK0 615 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 TBC1D31Q96DN5 1066 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 VCPIP1Q96JH7 1222 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 CCDC42Q96M95 316 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 CNPY3Q9BT09 278 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.47□□□□□ -1.05
HDAC6-221ENST00000477561 C2orf49Q9BVC5 232 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-221ENST00000477561 TRIM7Q9C029 511 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 TNKS2Q9H2K2 1166 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 NHEJ1Q9H9Q4 299 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-221ENST00000477561 SGK2Q9HBY8 427 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 CAPN10Q9HC96 672 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 ATP13A1Q9HD20 1204 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 LUC7LQ9NQ29 371 aaKnown RBP8.47□□□□□ -1.05
HDAC6-221ENST00000477561 SPTLC3Q9NUV7 552 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 PARVAQ9NVD7 372 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 GPATCH2LQ9NWQ4 482 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 PPARGC1AQ9UBK2 798 aaKnown RBP8.47□□□□□ -1.05
HDAC6-221ENST00000477561 ZNF212Q9UDV6 495 aa8.47□□□□□ -1.05
HDAC6-221ENST00000477561 CNOT8Q9UFF9 292 aaKnown RBP8.47□□□□□ -1.05
HDAC6-221ENST00000477561 GON4LQ3T8J9 2241 aa8.46□□□□□ -1.05
HDAC6-221ENST00000477561 A0A1B0GTW7 788 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 RNF103O00237 685 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 ARHGAP33O14559 1287 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 GIPC1O14908 333 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 BCAT2O15382 392 aaPredicted RBP8.46□□□□□ -1.06
HDAC6-221ENST00000477561 CREB3O43889 395 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 AKR1B10O60218 316 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 NDUFA10O95299 355 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 ADH1BP00325 375 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 TUBB4AP04350 444 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 C7P10643 843 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 GZMAP12544 262 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 RHOQP17081 205 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 GOT1P17174 413 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 C5AR1P21730 350 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 HOXD12P35452 270 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 CSNK1EP49674 416 aaKnown RBP8.46□□□□□ -1.06
HDAC6-221ENST00000477561 DNA2P51530 1060 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 GALCP54803 685 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 ARF5P84085 180 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 NRG1Q02297 640 aaPredicted RBP8.46□□□□□ -1.06
HDAC6-221ENST00000477561 GNA12Q03113 381 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 ELAVL3Q14576 367 aaKnown RBP8.46□□□□□ -1.06
HDAC6-221ENST00000477561 SPA17Q15506 151 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 EFHC2Q5JST6 749 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 PLEKHA7Q6IQ23 1121 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 PPP1R2P3Q6NXS1 205 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 NCEH1Q6PIU2 408 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 LAYNQ6UX15 382 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 RAD9BQ6WBX8 426 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 USP30Q70CQ3 517 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 RABEPKQ7Z6M1 372 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 NLRP14Q86W24 1093 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 ZNF354CQ86Y25 554 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 MINDY1Q8N5J2 469 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 DCAF4L2Q8NA75 395 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 NETO2Q8NC67 525 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 CHST14Q8NCH0 376 aa8.46□□□□□ -1.06
HDAC6-221ENST00000477561 OR14C36Q8NHC7 312 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms