RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 ATP11CQ8NB49 1132 aa21.44■■□□□ 1.02
SREBF1-210ENST00000471445 CCDC114Q96M63 670 aa21.44■■□□□ 1.02
SREBF1-210ENST00000471445 CAMK1GQ96NX5 476 aa21.44■■□□□ 1.02
SREBF1-210ENST00000471445 OR12D3Q9UGF7 316 aa21.44■■□□□ 1.02
SREBF1-210ENST00000471445 ANKRD6Q9Y2G4 727 aa21.44■■□□□ 1.02
SREBF1-210ENST00000471445 PCDHGB2Q9Y5G2 931 aa21.44■■□□□ 1.02
SREBF1-210ENST00000471445 PLK4O00444 970 aa21.43■■□□□ 1.02
SREBF1-210ENST00000471445 CCP110O43303 1012 aa21.43■■□□□ 1.02
SREBF1-210ENST00000471445 SMAD6O43541 496 aaKnown RBP21.43■■□□□ 1.02
SREBF1-210ENST00000471445 LATO43561 262 aa21.43■■□□□ 1.02
SREBF1-210ENST00000471445 CTSLP07711 333 aa21.43■■□□□ 1.02
SREBF1-210ENST00000471445 CTSKP43235 329 aa21.43■■□□□ 1.02
SREBF1-210ENST00000471445 MAPKAPK2P49137 400 aa21.43■■□□□ 1.02
SREBF1-210ENST00000471445 ARF5P84085 180 aa21.43■■□□□ 1.02
SREBF1-210ENST00000471445 GNA12Q03113 381 aa21.43■■□□□ 1.02
SREBF1-210ENST00000471445 SCAPQ12770 1279 aa21.43■■□□□ 1.02
SREBF1-210ENST00000471445 IQCB1Q15051 598 aa21.43■■□□□ 1.02
SREBF1-210ENST00000471445 PPP1R15BQ5SWA1 713 aa21.43■■□□□ 1.02
SREBF1-210ENST00000471445 DNAJC24Q6P3W2 148 aa21.43■■□□□ 1.02
SREBF1-210ENST00000471445 LINGO4Q6UY18 593 aa21.43■■□□□ 1.02
SREBF1-210ENST00000471445 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.43■■□□□ 1.02
SREBF1-210ENST00000471445 DRC7Q8IY82 874 aa21.43■■□□□ 1.02
SREBF1-210ENST00000471445 OR2A12Q8NGT7 310 aa21.43■■□□□ 1.02
SREBF1-210ENST00000471445 KDM4CQ9H3R0 1056 aa21.43■■□□□ 1.02
SREBF1-210ENST00000471445 RETREG1Q9H6L5 497 aa21.43■■□□□ 1.02
SREBF1-210ENST00000471445 ATP13A1Q9HD20 1204 aa21.43■■□□□ 1.02
SREBF1-210ENST00000471445 A0A1B0GTH6 734 aa21.42■■□□□ 1.02
SREBF1-210ENST00000471445 A0A1W2PQC6 194 aa21.42■■□□□ 1.02
SREBF1-210ENST00000471445 LRRC53A6NM62 1247 aa21.42■■□□□ 1.02
SREBF1-210ENST00000471445 FAM72CH0Y354 149 aa21.42■■□□□ 1.02
SREBF1-210ENST00000471445 VILLO15195 856 aa21.42■■□□□ 1.02
SREBF1-210ENST00000471445 BNIP3LO60238 219 aa21.42■■□□□ 1.02
SREBF1-210ENST00000471445 CBFA2T3O75081 653 aa21.42■■□□□ 1.02
SREBF1-210ENST00000471445 RTN2O75298 545 aa21.42■■□□□ 1.02
SREBF1-210ENST00000471445 LRIG2O94898 1065 aa21.42■■□□□ 1.02
SREBF1-210ENST00000471445 SERPINH1P50454 418 aaKnown RBP21.42■■□□□ 1.02
SREBF1-210ENST00000471445 CNTN1Q12860 1018 aa21.42■■□□□ 1.02
SREBF1-210ENST00000471445 FILIP1LQ4L180 1135 aa21.42■■□□□ 1.02
SREBF1-210ENST00000471445 KCNT1Q5JUK3 1230 aa21.42■■□□□ 1.02
SREBF1-210ENST00000471445 FAM72AQ5TYM5 149 aa21.42■■□□□ 1.02
SREBF1-210ENST00000471445 ACAD10Q6JQN1 1059 aa21.42■■□□□ 1.02
SREBF1-210ENST00000471445 FAM72DQ6L9T8 149 aa21.42■■□□□ 1.02
SREBF1-210ENST00000471445 RETSATQ6NUM9 610 aa21.42■■□□□ 1.02
SREBF1-210ENST00000471445 DBX2Q6ZNG2 339 aa21.42■■□□□ 1.02
SREBF1-210ENST00000471445 ADAT2Q7Z6V5 191 aaKnown RBP21.42■■□□□ 1.02
SREBF1-210ENST00000471445 FAM72BQ86X60 149 aa21.42■■□□□ 1.02
SREBF1-210ENST00000471445 MCOLN2Q8IZK6 566 aa21.42■■□□□ 1.02
SREBF1-210ENST00000471445 MCEEQ96PE7 176 aa21.42■■□□□ 1.02
SREBF1-210ENST00000471445 NDFIP2Q9NV92 336 aa21.42■■□□□ 1.02
SREBF1-210ENST00000471445 TMEM248Q9NWD8 314 aa21.42■■□□□ 1.02
SREBF1-210ENST00000471445 PCOLCE2Q9UKZ9 415 aa21.42■■□□□ 1.02
SREBF1-210ENST00000471445 CXorf51AA0A1B0GTR3 108 aa21.41■■□□□ 1.02
SREBF1-210ENST00000471445 CBX4O00257 560 aa21.41■■□□□ 1.02
SREBF1-210ENST00000471445 FLRT2O43155 660 aa21.41■■□□□ 1.02
SREBF1-210ENST00000471445 ZNF821O75541 412 aaPredicted RBP21.41■■□□□ 1.02
SREBF1-210ENST00000471445 TOP3BO95985 862 aaKnown RBP21.41■■□□□ 1.02
SREBF1-210ENST00000471445 WNT1P04628 370 aa21.41■■□□□ 1.02
SREBF1-210ENST00000471445 RHOQP17081 205 aa21.41■■□□□ 1.02
SREBF1-210ENST00000471445 CHRNA3P32297 505 aa21.41■■□□□ 1.02
SREBF1-210ENST00000471445 ZNF143P52747 638 aaPredicted RBP21.41■■□□□ 1.02
SREBF1-210ENST00000471445 ZNF423Q2M1K9 1284 aa21.41■■□□□ 1.02
SREBF1-210ENST00000471445 KLHL40Q2TBA0 621 aa21.41■■□□□ 1.02
SREBF1-210ENST00000471445 POM121L1PQ3SYA9 428 aa21.41■■□□□ 1.02
SREBF1-210ENST00000471445 BAHD1Q8TBE0 780 aaPredicted RBP21.41■■□□□ 1.02
SREBF1-210ENST00000471445 TBC1D31Q96DN5 1066 aa21.41■■□□□ 1.02
SREBF1-210ENST00000471445 ACE2Q9BYF1 805 aaPredicted RBP21.41■■□□□ 1.02
SREBF1-210ENST00000471445 MAGEB5Q9BZ81 275 aa21.41■■□□□ 1.02
SREBF1-210ENST00000471445 CEP44Q9C0F1 390 aa21.41■■□□□ 1.02
SREBF1-210ENST00000471445 TTYH3Q9C0H2 523 aa21.41■■□□□ 1.02
SREBF1-210ENST00000471445 TAS2R14Q9NYV8 317 aa21.41■■□□□ 1.02
SREBF1-210ENST00000471445 FARP1Q9Y4F1 1045 aaPredicted RBP21.41■■□□□ 1.02
SREBF1-210ENST00000471445 MAP1BP46821 2468 aaKnown RBP21.4■■□□□ 1.02
SREBF1-210ENST00000471445 TBC1D3DA0A087WVF3 549 aa21.4■■□□□ 1.02
SREBF1-210ENST00000471445 TBC1D3IA0A087WXS9 549 aa21.4■■□□□ 1.02
SREBF1-210ENST00000471445 TBC1D3EA0A087X179 549 aa21.4■■□□□ 1.02
SREBF1-210ENST00000471445 TBC1D3KA0A087X1G2 549 aa21.4■■□□□ 1.02
SREBF1-210ENST00000471445 A0A1W2PR77 199 aa21.4■■□□□ 1.02
SREBF1-210ENST00000471445 TBC1D3FA6NER0 549 aaPredicted RBP21.4■■□□□ 1.02
SREBF1-210ENST00000471445 TBC1D3LB9A6J9 549 aa21.4■■□□□ 1.02
SREBF1-210ENST00000471445 H0Y8X5 98 aa21.4■■□□□ 1.02
SREBF1-210ENST00000471445 TBC1D3HP0C7X1 549 aa21.4■■□□□ 1.02
SREBF1-210ENST00000471445 ETFBP38117 255 aa21.4■■□□□ 1.02
SREBF1-210ENST00000471445 CCT8P50990 548 aa21.4■■□□□ 1.02
SREBF1-210ENST00000471445 RPL7AP62424 266 aaKnown RBP21.4■■□□□ 1.02
SREBF1-210ENST00000471445 TRIP6Q15654 476 aaKnown RBP21.4■■□□□ 1.02
SREBF1-210ENST00000471445 PIP5KL1Q5T9C9 394 aa21.4■■□□□ 1.02
SREBF1-210ENST00000471445 E4F1Q66K89 784 aaPredicted RBP21.4■■□□□ 1.02
SREBF1-210ENST00000471445 TBC1D3GQ6DHY5 549 aa21.4■■□□□ 1.02
SREBF1-210ENST00000471445 TBC1D3CQ6IPX1 549 aa21.4■■□□□ 1.02
SREBF1-210ENST00000471445 RWDD4Q6NW29 188 aaKnown RBP21.4■■□□□ 1.02
SREBF1-210ENST00000471445 PPP1R2P3Q6NXS1 205 aa21.4■■□□□ 1.02
SREBF1-210ENST00000471445 GLRX5Q86SX6 157 aa21.4■■□□□ 1.02
SREBF1-210ENST00000471445 TRIM69Q86WT6 500 aa21.4■■□□□ 1.02
SREBF1-210ENST00000471445 TBC1D3Q8IZP1 549 aaPredicted RBP21.4■■□□□ 1.02
SREBF1-210ENST00000471445 CHST14Q8NCH0 376 aa21.4■■□□□ 1.02
SREBF1-210ENST00000471445 TMIEQ8NEW7 156 aa21.4■■□□□ 1.02
SREBF1-210ENST00000471445 SPON2Q9BUD6 331 aa21.4■■□□□ 1.02
SREBF1-210ENST00000471445 COL5A1P20908 1838 aaPredicted RBP21.4■■□□□ 1.02
SREBF1-210ENST00000471445 WNT9AO14904 365 aa21.39■■□□□ 1.01
SREBF1-210ENST00000471445 CD160O95971 181 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms