RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 UCHL3P15374 230 aa13.6□□□□□ -0.23
CPSF4-210ENST00000469897 GLDCP23378 1020 aa13.6□□□□□ -0.23
CPSF4-210ENST00000469897 EPHA8P29322 1005 aaPredicted RBP13.6□□□□□ -0.23
CPSF4-210ENST00000469897 RXRGP48443 463 aa13.6□□□□□ -0.23
CPSF4-210ENST00000469897 ARSIQ5FYB1 569 aa13.6□□□□□ -0.23
CPSF4-210ENST00000469897 ARTNQ5T4W7 220 aa13.6□□□□□ -0.23
CPSF4-210ENST00000469897 TRNP1Q6NT89 227 aa13.6□□□□□ -0.23
CPSF4-210ENST00000469897 PHLDB2Q86SQ0 1253 aa13.6□□□□□ -0.23
CPSF4-210ENST00000469897 SETD3Q86TU7 594 aaPredicted RBP13.6□□□□□ -0.23
CPSF4-210ENST00000469897 TRIM69Q86WT6 500 aa13.6□□□□□ -0.23
CPSF4-210ENST00000469897 ARRDC3Q96B67 414 aa13.6□□□□□ -0.23
CPSF4-210ENST00000469897 CFAP57Q96MR6 1250 aa13.6□□□□□ -0.23
CPSF4-210ENST00000469897 DACH1Q9UI36 760 aa13.6□□□□□ -0.23
CPSF4-210ENST00000469897 PAXBP1Q9Y5B6 917 aa13.6□□□□□ -0.23
CPSF4-210ENST00000469897 CKAP5Q14008 2032 aa13.59□□□□□ -0.23
CPSF4-210ENST00000469897 A0A1W2PQU0 124 aa13.59□□□□□ -0.23
CPSF4-210ENST00000469897 YKT6O15498 198 aa13.59□□□□□ -0.23
CPSF4-210ENST00000469897 ZZEF1O43149 2961 aa13.59□□□□□ -0.23
CPSF4-210ENST00000469897 MAGEC1O60732 1142 aa13.59□□□□□ -0.23
CPSF4-210ENST00000469897 SDC3O75056 442 aa13.59□□□□□ -0.23
CPSF4-210ENST00000469897 SCNN1AP37088 669 aa13.59□□□□□ -0.23
CPSF4-210ENST00000469897 PI4KAP42356 2102 aa13.59□□□□□ -0.23
CPSF4-210ENST00000469897 COL28A1Q2UY09 1125 aa13.59□□□□□ -0.23
CPSF4-210ENST00000469897 SETMARQ53H47 684 aaPredicted RBP13.59□□□□□ -0.23
CPSF4-210ENST00000469897 TCP11X2Q5H9J9 407 aa13.59□□□□□ -0.23
CPSF4-210ENST00000469897 C6orf118Q5T5N4 469 aa13.59□□□□□ -0.23
CPSF4-210ENST00000469897 PIP5KL1Q5T9C9 394 aa13.59□□□□□ -0.23
CPSF4-210ENST00000469897 IQCHQ86VS3 1027 aa13.59□□□□□ -0.23
CPSF4-210ENST00000469897 TMPRSS12Q86WS5 348 aa13.59□□□□□ -0.23
CPSF4-210ENST00000469897 FAM131BQ86XD5 332 aa13.59□□□□□ -0.23
CPSF4-210ENST00000469897 EMC1Q8N766 993 aa13.59□□□□□ -0.23
CPSF4-210ENST00000469897 PDCD7Q8N8D1 485 aaKnown RBP13.59□□□□□ -0.23
CPSF4-210ENST00000469897 TMIEQ8NEW7 156 aa13.59□□□□□ -0.23
CPSF4-210ENST00000469897 TSC1Q92574 1164 aa13.59□□□□□ -0.23
CPSF4-210ENST00000469897 KLHDC7BQ96G42 594 aa13.59□□□□□ -0.23
CPSF4-210ENST00000469897 CCDC114Q96M63 670 aa13.59□□□□□ -0.23
CPSF4-210ENST00000469897 HAPLN3Q96S86 360 aa13.59□□□□□ -0.23
CPSF4-210ENST00000469897 MYOCQ99972 504 aa13.59□□□□□ -0.23
CPSF4-210ENST00000469897 VPS16Q9H269 839 aa13.59□□□□□ -0.23
CPSF4-210ENST00000469897 PREBQ9HCU5 417 aa13.59□□□□□ -0.23
CPSF4-210ENST00000469897 TAB2Q9NYJ8 693 aa13.59□□□□□ -0.23
CPSF4-210ENST00000469897 PCDHGA1Q9Y5H4 931 aa13.59□□□□□ -0.23
CPSF4-210ENST00000469897 SPEGQ15772 3267 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 WDFY3Q8IZQ1 3526 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 IGLV3-10A0A075B6K4 115 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 ILVBLA1L0T0 632 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 ZNF821O75541 412 aaPredicted RBP13.58□□□□□ -0.24
CPSF4-210ENST00000469897 GFPT2O94808 682 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 PCDH8O95206 1070 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 LSM8O95777 96 aaKnown RBP13.58□□□□□ -0.24
CPSF4-210ENST00000469897 C1SP09871 688 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 PRLRP16471 622 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 NUDT1P36639 197 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 KLK7P49862 253 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 DNA2P51530 1060 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 ATP11AP98196 1134 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 OVGP1Q12889 678 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 RAB6CQ53S08 254 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 NAA35Q5VZE5 725 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 NEK5Q6P3R8 708 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 DPY19L3Q6ZPD9 716 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 KANSL1Q7Z3B3 1105 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 BNIPLQ7Z465 357 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 SLC25A45Q8N413 288 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 OXR1Q8N573 874 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 GRIN3AQ8TCU5 1115 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 SLC20A1Q8WUM9 679 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 MAGEB5Q9BZ81 275 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 ZYG11BQ9C0D3 744 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 RAB6CQ9H0N0 254 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 NUP62CLQ9H1M0 184 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 CAAP1Q9H8G2 361 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 FZD3Q9NPG1 666 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 DYRK4Q9NR20 520 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 TMEM51Q9NW97 253 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 IL36AQ9UHA7 158 aa13.58□□□□□ -0.24
CPSF4-210ENST00000469897 IGF2RP11717 2491 aa13.57□□□□□ -0.24
CPSF4-210ENST00000469897 F8VZ95 297 aa13.57□□□□□ -0.24
CPSF4-210ENST00000469897 LEFTY1O75610 366 aa13.57□□□□□ -0.24
CPSF4-210ENST00000469897 RFPL3O75679 317 aa13.57□□□□□ -0.24
CPSF4-210ENST00000469897 ZMPSTE24O75844 475 aa13.57□□□□□ -0.24
CPSF4-210ENST00000469897 PRNPP04156 253 aa13.57□□□□□ -0.24
CPSF4-210ENST00000469897 THEGLP0DJG4 465 aa13.57□□□□□ -0.24
CPSF4-210ENST00000469897 CKMT2P17540 419 aa13.57□□□□□ -0.24
CPSF4-210ENST00000469897 CHRNB2P17787 502 aa13.57□□□□□ -0.24
CPSF4-210ENST00000469897 EEF1GP26641 437 aaKnown RBP13.57□□□□□ -0.24
CPSF4-210ENST00000469897 RECQLP46063 649 aaPredicted RBP13.57□□□□□ -0.24
CPSF4-210ENST00000469897 ACADVLP49748 655 aa13.57□□□□□ -0.24
CPSF4-210ENST00000469897 CLCN6P51797 869 aa13.57□□□□□ -0.24
CPSF4-210ENST00000469897 CLDN2P57739 230 aa13.57□□□□□ -0.24
CPSF4-210ENST00000469897 NOMO3P69849 1222 aa13.57□□□□□ -0.24
CPSF4-210ENST00000469897 SLC20A2Q08357 652 aa13.57□□□□□ -0.24
CPSF4-210ENST00000469897 CCDC15Q0P6D6 951 aa13.57□□□□□ -0.24
CPSF4-210ENST00000469897 TARDBPQ13148 414 aaKnown RBP eCLIP13.57□□□□□ -0.24
CPSF4-210ENST00000469897 ZNF284Q2VY69 593 aa13.57□□□□□ -0.24
CPSF4-210ENST00000469897 ACBD5Q5T8D3 534 aaPredicted RBP13.57□□□□□ -0.24
CPSF4-210ENST00000469897 SFMBT2Q5VUG0 894 aa13.57□□□□□ -0.24
CPSF4-210ENST00000469897 ERN2Q76MJ5 926 aaKnown RBP13.57□□□□□ -0.24
CPSF4-210ENST00000469897 HORMAD1Q86X24 394 aa13.57□□□□□ -0.24
CPSF4-210ENST00000469897 DRC7Q8IY82 874 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms