RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 ITGA8P53708 1063 aa13.01□□□□□ -0.33
TRAF4-208ENST00000469529 PLTPP55058 493 aa13.01□□□□□ -0.33
TRAF4-208ENST00000469529 KCNJ11Q14654 390 aa13.01□□□□□ -0.33
TRAF4-208ENST00000469529 TRIP13Q15645 432 aaPredicted RBP13.01□□□□□ -0.33
TRAF4-208ENST00000469529 TPSAB1Q15661 275 aa13.01□□□□□ -0.33
TRAF4-208ENST00000469529 SLC14A2Q15849 920 aa13.01□□□□□ -0.33
TRAF4-208ENST00000469529 PUS10Q3MIT2 529 aaKnown RBP13.01□□□□□ -0.33
TRAF4-208ENST00000469529 ALG1LQ6GMV1 187 aa13.01□□□□□ -0.33
TRAF4-208ENST00000469529 PTCRAQ6ISU1 281 aaPredicted RBP13.01□□□□□ -0.33
TRAF4-208ENST00000469529 ARHGEF18Q6ZSZ5 1173 aa13.01□□□□□ -0.33
TRAF4-208ENST00000469529 OTOP3Q7RTS5 596 aa13.01□□□□□ -0.33
TRAF4-208ENST00000469529 PID1Q7Z2X4 250 aa13.01□□□□□ -0.33
TRAF4-208ENST00000469529 METTL3Q86U44 580 aaKnown RBP13.01□□□□□ -0.33
TRAF4-208ENST00000469529 MREGQ8N565 214 aa13.01□□□□□ -0.33
TRAF4-208ENST00000469529 OR52K2Q8NGK3 314 aa13.01□□□□□ -0.33
TRAF4-208ENST00000469529 CCDC110Q8TBZ0 833 aa13.01□□□□□ -0.33
TRAF4-208ENST00000469529 FBXO25Q8TCJ0 367 aa13.01□□□□□ -0.33
TRAF4-208ENST00000469529 DEPDC1BQ8WUY9 529 aa13.01□□□□□ -0.33
TRAF4-208ENST00000469529 NSMCE1Q8WV22 266 aa13.01□□□□□ -0.33
TRAF4-208ENST00000469529 FCRL5Q96RD9 977 aa13.01□□□□□ -0.33
TRAF4-208ENST00000469529 MYADMQ96S97 322 aa13.01□□□□□ -0.33
TRAF4-208ENST00000469529 DPH5Q9H2P9 285 aa13.01□□□□□ -0.33
TRAF4-208ENST00000469529 ETNK1Q9HBU6 452 aa13.01□□□□□ -0.33
TRAF4-208ENST00000469529 DUS2Q9NX74 493 aaKnown RBP13.01□□□□□ -0.33
TRAF4-208ENST00000469529 MTRF1LQ9UGC7 380 aaKnown RBP13.01□□□□□ -0.33
TRAF4-208ENST00000469529 CD207Q9UJ71 328 aa13.01□□□□□ -0.33
TRAF4-208ENST00000469529 HPCAL4Q9UM19 191 aa13.01□□□□□ -0.33
TRAF4-208ENST00000469529 NFU1Q9UMS0 254 aa13.01□□□□□ -0.33
TRAF4-208ENST00000469529 ANHXE9PGG2 379 aa13□□□□□ -0.33
TRAF4-208ENST00000469529 J3KR12 359 aa13□□□□□ -0.33
TRAF4-208ENST00000469529 KCNK1O00180 336 aa13□□□□□ -0.33
TRAF4-208ENST00000469529 EIF3HO15372 352 aaKnown RBP eCLIP13□□□□□ -0.33
TRAF4-208ENST00000469529 ATP8B1O43520 1251 aa13□□□□□ -0.33
TRAF4-208ENST00000469529 PPFIA2O75334 1257 aa13□□□□□ -0.33
TRAF4-208ENST00000469529 SUN1O94901 812 aa13□□□□□ -0.33
TRAF4-208ENST00000469529 METTL18O95568 372 aa13□□□□□ -0.33
TRAF4-208ENST00000469529 MLNP12872 115 aa13□□□□□ -0.33
TRAF4-208ENST00000469529 IL9P15248 144 aa13□□□□□ -0.33
TRAF4-208ENST00000469529 CD68P34810 354 aaPredicted RBP13□□□□□ -0.33
TRAF4-208ENST00000469529 GEMIN4P57678 1058 aaKnown RBP13□□□□□ -0.33
TRAF4-208ENST00000469529 GAD2Q05329 585 aa13□□□□□ -0.33
TRAF4-208ENST00000469529 NSUN2Q08J23 767 aaKnown RBP eCLIP13□□□□□ -0.33
TRAF4-208ENST00000469529 DHCR24Q15392 516 aa13□□□□□ -0.33
TRAF4-208ENST00000469529 FSCBQ5H9T9 825 aa13□□□□□ -0.33
TRAF4-208ENST00000469529 MARC1Q5VT66 337 aa13□□□□□ -0.33
TRAF4-208ENST00000469529 IZUMO3Q5VZ72 239 aa13□□□□□ -0.33
TRAF4-208ENST00000469529 ARMC3Q5W041 872 aa13□□□□□ -0.33
TRAF4-208ENST00000469529 TANGO2Q6ICL3 276 aa13□□□□□ -0.33
TRAF4-208ENST00000469529 ARHGAP36Q6ZRI8 547 aa13□□□□□ -0.33
TRAF4-208ENST00000469529 B4GALNT4Q76KP1 1039 aa13□□□□□ -0.33
TRAF4-208ENST00000469529 GET4Q7L5D6 327 aaPredicted RBP13□□□□□ -0.33
TRAF4-208ENST00000469529 PRUNE1Q86TP1 453 aa13□□□□□ -0.33
TRAF4-208ENST00000469529 CIR1Q86X95 450 aaPredicted RBP13□□□□□ -0.33
TRAF4-208ENST00000469529 MFN1Q8IWA4 741 aa13□□□□□ -0.33
TRAF4-208ENST00000469529 ZCCHC9Q8N567 271 aaKnown RBP13□□□□□ -0.33
TRAF4-208ENST00000469529 DCAF4L2Q8NA75 395 aa13□□□□□ -0.33
TRAF4-208ENST00000469529 PRCCQ92733 491 aaPredicted RBP13□□□□□ -0.33
TRAF4-208ENST00000469529 TADA1Q96BN2 335 aa13□□□□□ -0.33
TRAF4-208ENST00000469529 PSKH2Q96QS6 385 aa13□□□□□ -0.33
TRAF4-208ENST00000469529 HINFPQ9BQA5 517 aa13□□□□□ -0.33
TRAF4-208ENST00000469529 TXLNGYQ9BZA5 131 aa13□□□□□ -0.33
TRAF4-208ENST00000469529 TRIM31Q9BZY9 425 aa13□□□□□ -0.33
TRAF4-208ENST00000469529 GBA3Q9H227 469 aa13□□□□□ -0.33
TRAF4-208ENST00000469529 ARFGAP3Q9NP61 516 aa13□□□□□ -0.33
TRAF4-208ENST00000469529 RAB6BQ9NRW1 208 aa13□□□□□ -0.33
TRAF4-208ENST00000469529 HAUS2Q9NVX0 235 aa13□□□□□ -0.33
TRAF4-208ENST00000469529 RBM22Q9NW64 420 aaKnown RBP eCLIP13□□□□□ -0.335e-9■■■■□ 21.3
TRAF4-208ENST00000469529 SLC27A6Q9Y2P4 619 aa13□□□□□ -0.33
TRAF4-208ENST00000469529 OBSL1O75147 1896 aa12.99□□□□□ -0.33
TRAF4-208ENST00000469529 GRXCR2A6NFK2 248 aa12.99□□□□□ -0.33
TRAF4-208ENST00000469529 E7ESA3 106 aa12.99□□□□□ -0.33
TRAF4-208ENST00000469529 AP3B1O00203 1094 aa12.99□□□□□ -0.33
TRAF4-208ENST00000469529 ZBTB24O43167 697 aaPredicted RBP12.99□□□□□ -0.33
TRAF4-208ENST00000469529 NFATC1O95644 943 aa12.99□□□□□ -0.33
TRAF4-208ENST00000469529 CD160O95971 181 aa12.99□□□□□ -0.33
TRAF4-208ENST00000469529 ADH1CP00326 375 aa12.99□□□□□ -0.33
TRAF4-208ENST00000469529 PSMC3P17980 439 aa12.99□□□□□ -0.33
TRAF4-208ENST00000469529 ACVRL1P37023 503 aa12.99□□□□□ -0.33
TRAF4-208ENST00000469529 HSPA9P38646 679 aaKnown RBP12.99□□□□□ -0.33
TRAF4-208ENST00000469529 SULT2A1Q06520 285 aa12.99□□□□□ -0.33
TRAF4-208ENST00000469529 ZBTB17Q13105 803 aa12.99□□□□□ -0.33
TRAF4-208ENST00000469529 CDH18Q13634 790 aa12.99□□□□□ -0.33
TRAF4-208ENST00000469529 HLTFQ14527 1009 aaKnown RBP eCLIP12.99□□□□□ -0.33
TRAF4-208ENST00000469529 SLMAPQ14BN4 828 aa12.99□□□□□ -0.33
TRAF4-208ENST00000469529 PLEKHG6Q3KR16 790 aa12.99□□□□□ -0.33
TRAF4-208ENST00000469529 RALGPS1Q5JS13 557 aa12.99□□□□□ -0.33
TRAF4-208ENST00000469529 LY6G5CQ5SRR4 150 aa12.99□□□□□ -0.33
TRAF4-208ENST00000469529 RNF219Q5W0B1 726 aaPredicted RBP12.99□□□□□ -0.33
TRAF4-208ENST00000469529 KCTD11Q693B1 232 aa12.99□□□□□ -0.33
TRAF4-208ENST00000469529 RETSATQ6NUM9 610 aa12.99□□□□□ -0.33
TRAF4-208ENST00000469529 FBXO38Q6PIJ6 1188 aa12.99□□□□□ -0.33
TRAF4-208ENST00000469529 PPP1R21Q6ZMI0 780 aa12.99□□□□□ -0.33
TRAF4-208ENST00000469529 MTSS1LQ765P7 747 aa12.99□□□□□ -0.33
TRAF4-208ENST00000469529 CARNMT1Q8N4J0 409 aa12.99□□□□□ -0.33
TRAF4-208ENST00000469529 CCDC33Q8N5R6 958 aa12.99□□□□□ -0.33
TRAF4-208ENST00000469529 NETO2Q8NC67 525 aa12.99□□□□□ -0.33
TRAF4-208ENST00000469529 ATP2A3Q93084 1043 aa12.99□□□□□ -0.33
TRAF4-208ENST00000469529 NXPE3Q969Y0 559 aa12.99□□□□□ -0.33
TRAF4-208ENST00000469529 TTC17Q96AE7 1141 aa12.99□□□□□ -0.33
TRAF4-208ENST00000469529 FMO2Q99518 471 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms