RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 PIAS1O75925 651 aa13.99□□□□□ -0.17
BRAT1-203ENST00000467558 CD48P09326 243 aa13.99□□□□□ -0.17
BRAT1-203ENST00000467558 FGFR1P11362 822 aa13.99□□□□□ -0.17
BRAT1-203ENST00000467558 CDH2P19022 906 aaPredicted RBP13.99□□□□□ -0.17
BRAT1-203ENST00000467558 L1CAMP32004 1257 aa13.99□□□□□ -0.17
BRAT1-203ENST00000467558 DAOAP59103 153 aa13.99□□□□□ -0.17
BRAT1-203ENST00000467558 FSTL1Q12841 308 aa13.99□□□□□ -0.17
BRAT1-203ENST00000467558 KCTD19Q17RG1 926 aaPredicted RBP13.99□□□□□ -0.17
BRAT1-203ENST00000467558 AGKQ53H12 422 aa13.99□□□□□ -0.17
BRAT1-203ENST00000467558 TSC22D3Q99576 134 aa13.99□□□□□ -0.17
BRAT1-203ENST00000467558 ZCCHC2Q9C0B9 1178 aaKnown RBP13.99□□□□□ -0.17
BRAT1-203ENST00000467558 ELOVL6Q9H5J4 265 aa13.99□□□□□ -0.17
BRAT1-203ENST00000467558 GGA2Q9UJY4 613 aa13.99□□□□□ -0.17
BRAT1-203ENST00000467558 FAM32AQ9Y421 112 aaKnown RBP13.99□□□□□ -0.17
BRAT1-203ENST00000467558 USP54Q70EL1 1684 aa13.99□□□□□ -0.17
BRAT1-203ENST00000467558 PRR23AA6NEV1 266 aa13.99□□□□□ -0.17
BRAT1-203ENST00000467558 MSI1O43347 362 aaKnown RBP13.99□□□□□ -0.17
BRAT1-203ENST00000467558 MFSD11O43934 449 aa13.99□□□□□ -0.17
BRAT1-203ENST00000467558 SYNCRIPO60506 623 aaKnown RBP13.99□□□□□ -0.17
BRAT1-203ENST00000467558 KRT6AP02538 564 aa13.99□□□□□ -0.17
BRAT1-203ENST00000467558 KRT6BP04259 564 aa13.99□□□□□ -0.17
BRAT1-203ENST00000467558 MSH3P20585 1137 aa13.99□□□□□ -0.17
BRAT1-203ENST00000467558 KCNA3P22001 575 aa13.99□□□□□ -0.17
BRAT1-203ENST00000467558 CES1P23141 567 aa13.99□□□□□ -0.17
BRAT1-203ENST00000467558 KRT6CP48668 564 aa13.99□□□□□ -0.17
BRAT1-203ENST00000467558 NAGLUP54802 743 aa13.99□□□□□ -0.17
BRAT1-203ENST00000467558 CDK18Q07002 472 aa13.99□□□□□ -0.17
BRAT1-203ENST00000467558 KRT72Q14CN4 511 aa13.99□□□□□ -0.17
BRAT1-203ENST00000467558 OLFML2BQ68BL8 750 aa13.99□□□□□ -0.17
BRAT1-203ENST00000467558 LRRC8BQ6P9F7 803 aa13.99□□□□□ -0.17
BRAT1-203ENST00000467558 ARCQ7LC44 396 aa13.99□□□□□ -0.17
BRAT1-203ENST00000467558 NEUROG2Q9H2A3 272 aa13.99□□□□□ -0.17
BRAT1-203ENST00000467558 SPG21Q9NZD8 308 aa13.99□□□□□ -0.17
BRAT1-203ENST00000467558 FBXO5Q9UKT4 447 aa13.99□□□□□ -0.17
BRAT1-203ENST00000467558 STRCP1A6NGW2 1772 aa13.99□□□□□ -0.17
BRAT1-203ENST00000467558 FKBP9O95302 570 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 PTGIRP43119 386 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 GLUD2P49448 558 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 ACLYP53396 1101 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 IL2P60568 153 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 SNRPD1P62314 119 aaKnown RBP13.98□□□□□ -0.17
BRAT1-203ENST00000467558 FKBP9P1Q75LS8 142 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 CRYBG2Q8N1P7 616 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 KYQ8NBH2 561 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 NETO2Q8NC67 525 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 QKIQ96PU8 341 aaKnown RBP eCLIP13.98□□□□□ -0.17
BRAT1-203ENST00000467558 BATF3Q9NR55 127 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 SPATS2LQ9NUQ6 558 aaKnown RBP13.98□□□□□ -0.17
BRAT1-203ENST00000467558 POLG2Q9UHN1 485 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 H3BMM5 538 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 LTA4HP09960 611 aaKnown RBP13.98□□□□□ -0.17
BRAT1-203ENST00000467558 OR56A5P0C7T3 313 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 CYP2A6P11509 494 aaPredicted RBP13.98□□□□□ -0.17
BRAT1-203ENST00000467558 POLR2EP19388 210 aaKnown RBP13.98□□□□□ -0.17
BRAT1-203ENST00000467558 FMO4P31512 558 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 SKIV2L2P42285 1042 aaKnown RBP13.98□□□□□ -0.17
BRAT1-203ENST00000467558 CCNG1P51959 295 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 MAXP61244 160 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 NR6A1Q15406 480 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 TRMT5Q32P41 509 aaKnown RBP13.98□□□□□ -0.17
BRAT1-203ENST00000467558 USP45Q70EL2 814 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 TAGAPQ8N103 731 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 CLEC4FQ8N1N0 589 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 LZICQ8WZA0 190 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 BORCS6Q96GS4 357 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 CCDC90BQ9GZT6 254 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 SYBUQ9NX95 663 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 LNPEPQ9UIQ6 1025 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 BTN3A1O00481 513 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 RGS20O76081 388 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 PIGNO95427 931 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 MT-CO1P00395 513 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 FAM163BP0C2L3 166 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 VCLP18206 1134 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 LAG3P18627 525 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 HLA-DPA1P20036 260 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 EDNRBP24530 442 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 SOX11P35716 441 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 ZNF398Q8TD17 642 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 FAM162AQ96A26 154 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 TMEM159Q96B96 161 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 CORO1BQ9BR76 489 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 TMEM109Q9BVC6 243 aa13.98□□□□□ -0.17
BRAT1-203ENST00000467558 TRMT13Q9NUP7 481 aaKnown RBP13.98□□□□□ -0.17
BRAT1-203ENST00000467558 MARF1Q9Y4F3 1742 aaKnown RBP13.98□□□□□ -0.17
BRAT1-203ENST00000467558 C5orf60A6NFR6 353 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 FGF1P05230 155 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 ITGB6P18564 788 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 PLK1P53350 603 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 YBEYP58557 167 aaPredicted RBP13.97□□□□□ -0.17
BRAT1-203ENST00000467558 CRYMQ14894 314 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 RNASEH2BQ5TBB1 312 aaKnown RBP13.97□□□□□ -0.17
BRAT1-203ENST00000467558 FUT10Q6P4F1 479 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 YTHDF3Q7Z739 585 aaKnown RBP13.97□□□□□ -0.17
BRAT1-203ENST00000467558 DSG4Q86SJ6 1040 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 OR56A4Q8NGH8 313 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 STAG3L4Q8TBR4 150 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 MID1IP1Q9NPA3 183 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 GMIPQ9P107 970 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 FAM50BQ9Y247 325 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms