RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 C1orf131Q8NDD1 294 aaKnown RBP14.14□□□□□ -0.15
CXCL12-202ENST00000374426 OR2A12Q8NGT7 310 aa14.14□□□□□ -0.15
CXCL12-202ENST00000374426 SLC39A7Q92504 469 aa14.14□□□□□ -0.15
CXCL12-202ENST00000374426 SHC3Q92529 594 aa14.14□□□□□ -0.15
CXCL12-202ENST00000374426 BAP1Q92560 729 aa14.14□□□□□ -0.15
CXCL12-202ENST00000374426 KLK6Q92876 244 aa14.14□□□□□ -0.15
CXCL12-202ENST00000374426 FCRL3Q96P31 734 aaPredicted RBP14.14□□□□□ -0.15
CXCL12-202ENST00000374426 PSMB7Q99436 277 aa14.14□□□□□ -0.15
CXCL12-202ENST00000374426 MUC3BQ9H195 1237 aa14.14□□□□□ -0.15
CXCL12-202ENST00000374426 ANLNQ9NQW6 1124 aa14.14□□□□□ -0.15
CXCL12-202ENST00000374426 KLHL11Q9NVR0 708 aa14.14□□□□□ -0.15
CXCL12-202ENST00000374426 PCDHGC3Q9UN70 934 aa14.14□□□□□ -0.15
CXCL12-202ENST00000374426 TENM4Q6N022 2769 aa14.14□□□□□ -0.15
CXCL12-202ENST00000374426 M0QYT0 321 aa14.13□□□□□ -0.15
CXCL12-202ENST00000374426 TK2O00142 265 aa14.13□□□□□ -0.15
CXCL12-202ENST00000374426 KPNA3O00505 521 aaPredicted RBP14.13□□□□□ -0.15
CXCL12-202ENST00000374426 ATXN7O15265 892 aaPredicted RBP14.13□□□□□ -0.15
CXCL12-202ENST00000374426 DAB1O75553 588 aa14.13□□□□□ -0.15
CXCL12-202ENST00000374426 MT-CO3P00414 261 aa14.13□□□□□ -0.15
CXCL12-202ENST00000374426 GIMD1P0DJR0 217 aa14.13□□□□□ -0.15
CXCL12-202ENST00000374426 TFE3P19532 575 aaPredicted RBP14.13□□□□□ -0.15
CXCL12-202ENST00000374426 CHRNA3P32297 505 aa14.13□□□□□ -0.15
CXCL12-202ENST00000374426 CDH4P55283 916 aa14.13□□□□□ -0.15
CXCL12-202ENST00000374426 E2F1Q01094 437 aa14.13□□□□□ -0.15
CXCL12-202ENST00000374426 TBC1D25Q3MII6 688 aa14.13□□□□□ -0.15
CXCL12-202ENST00000374426 PTPN20Q4JDL3 420 aa14.13□□□□□ -0.15
CXCL12-202ENST00000374426 ALFQ53S48 1182 aa14.13□□□□□ -0.15
CXCL12-202ENST00000374426 OR6B2Q6IFH4 312 aa14.13□□□□□ -0.15
CXCL12-202ENST00000374426 NEK5Q6P3R8 708 aa14.13□□□□□ -0.15
CXCL12-202ENST00000374426 KDM7AQ6ZMT4 941 aa14.13□□□□□ -0.15
CXCL12-202ENST00000374426 SLC26A9Q7LBE3 791 aa14.13□□□□□ -0.15
CXCL12-202ENST00000374426 HORMAD1Q86X24 394 aa14.13□□□□□ -0.15
CXCL12-202ENST00000374426 ERICH1Q86X53 443 aa14.13□□□□□ -0.15
CXCL12-202ENST00000374426 ZNF683Q8IZ20 524 aa14.13□□□□□ -0.15
CXCL12-202ENST00000374426 ATP11CQ8NB49 1132 aa14.13□□□□□ -0.15
CXCL12-202ENST00000374426 OR13H1Q8NG92 308 aa14.13□□□□□ -0.15
CXCL12-202ENST00000374426 OR4C6Q8NH72 309 aa14.13□□□□□ -0.15
CXCL12-202ENST00000374426 ARRDC3Q96B67 414 aa14.13□□□□□ -0.15
CXCL12-202ENST00000374426 FAM81BQ96LP2 452 aa14.13□□□□□ -0.15
CXCL12-202ENST00000374426 SIK2Q9H0K1 926 aa14.13□□□□□ -0.15
CXCL12-202ENST00000374426 FZD3Q9NPG1 666 aa14.13□□□□□ -0.15
CXCL12-202ENST00000374426 PIGVQ9NUD9 493 aa14.13□□□□□ -0.15
CXCL12-202ENST00000374426 APEX2Q9UBZ4 518 aa14.13□□□□□ -0.15
CXCL12-202ENST00000374426 VPS51Q9UID3 782 aa14.13□□□□□ -0.15
CXCL12-202ENST00000374426 PCDHB1Q9Y5F3 818 aa14.13□□□□□ -0.15
CXCL12-202ENST00000374426 FFAR2O15552 330 aa14.12□□□□□ -0.15
CXCL12-202ENST00000374426 SMAD6O43541 496 aaKnown RBP14.12□□□□□ -0.15
CXCL12-202ENST00000374426 ADCY5O95622 1261 aa14.12□□□□□ -0.15
CXCL12-202ENST00000374426 RRM1P23921 792 aa14.12□□□□□ -0.15
CXCL12-202ENST00000374426 NOS2P35228 1153 aa14.12□□□□□ -0.15
CXCL12-202ENST00000374426 CLDN2P57739 230 aa14.12□□□□□ -0.15
CXCL12-202ENST00000374426 KRT83P78385 493 aa14.12□□□□□ -0.15
CXCL12-202ENST00000374426 DAB2P98082 770 aa14.12□□□□□ -0.15
CXCL12-202ENST00000374426 SLC6A3Q01959 620 aa14.12□□□□□ -0.15
CXCL12-202ENST00000374426 TLE3Q04726 772 aa14.12□□□□□ -0.15
CXCL12-202ENST00000374426 C19orf57Q0VDD7 668 aa14.12□□□□□ -0.15
CXCL12-202ENST00000374426 SLC22A18ASQ8N1D0 253 aa14.12□□□□□ -0.15
CXCL12-202ENST00000374426 CHST14Q8NCH0 376 aa14.12□□□□□ -0.15
CXCL12-202ENST00000374426 TMIEQ8NEW7 156 aa14.12□□□□□ -0.15
CXCL12-202ENST00000374426 NOX5Q96PH1 765 aa14.12□□□□□ -0.15
CXCL12-202ENST00000374426 NPY6RQ99463 290 aa14.12□□□□□ -0.15
CXCL12-202ENST00000374426 C2orf49Q9BVC5 232 aaPredicted RBP14.12□□□□□ -0.15
CXCL12-202ENST00000374426 TKTL2Q9H0I9 626 aa14.12□□□□□ -0.15
CXCL12-202ENST00000374426 ARHGEF38Q9NXL2 777 aa14.12□□□□□ -0.15
CXCL12-202ENST00000374426 AJAP1Q9UKB5 411 aaPredicted RBP14.12□□□□□ -0.15
CXCL12-202ENST00000374426 ZFR2Q9UPR6 939 aaKnown RBP14.12□□□□□ -0.15
CXCL12-202ENST00000374426 FARP1Q9Y4F1 1045 aaPredicted RBP14.12□□□□□ -0.15
CXCL12-202ENST00000374426 SNX10Q9Y5X0 201 aa14.12□□□□□ -0.15
CXCL12-202ENST00000374426 TDRD6O60522 2096 aaKnown RBP14.11□□□□□ -0.15
CXCL12-202ENST00000374426 A0A0D9SEW6 157 aa14.11□□□□□ -0.15
CXCL12-202ENST00000374426 PIAS2O75928 621 aa14.11□□□□□ -0.15
CXCL12-202ENST00000374426 ZIC2O95409 532 aaPredicted RBP14.11□□□□□ -0.15
CXCL12-202ENST00000374426 RHOCP08134 193 aa14.11□□□□□ -0.15
CXCL12-202ENST00000374426 CKMT1AP12532 417 aa14.11□□□□□ -0.15
CXCL12-202ENST00000374426 HNRNPA2B1P22626 353 aaKnown RBP14.11□□□□□ -0.15
CXCL12-202ENST00000374426 AKT2P31751 481 aa14.11□□□□□ -0.15
CXCL12-202ENST00000374426 ACTN2P35609 894 aa14.11□□□□□ -0.15
CXCL12-202ENST00000374426 CXCR3P49682 368 aa14.11□□□□□ -0.15
CXCL12-202ENST00000374426 CCDC173Q0VFZ6 552 aa14.11□□□□□ -0.15
CXCL12-202ENST00000374426 TMEM259Q4ZIN3 620 aa14.11□□□□□ -0.15
CXCL12-202ENST00000374426 ARTNQ5T4W7 220 aa14.11□□□□□ -0.15
CXCL12-202ENST00000374426 CDCP2Q5VXM1 449 aa14.11□□□□□ -0.15
CXCL12-202ENST00000374426 SEL1L3Q68CR1 1132 aa14.11□□□□□ -0.15
CXCL12-202ENST00000374426 LINGO4Q6UY18 593 aa14.11□□□□□ -0.15
CXCL12-202ENST00000374426 GBP6Q6ZN66 633 aa14.11□□□□□ -0.15
CXCL12-202ENST00000374426 GCNT7Q6ZNI0 430 aa14.11□□□□□ -0.15
CXCL12-202ENST00000374426 ERN2Q76MJ5 926 aaKnown RBP14.11□□□□□ -0.15
CXCL12-202ENST00000374426 TMC6Q7Z403 805 aa14.11□□□□□ -0.15
CXCL12-202ENST00000374426 ABI3BPQ7Z7G0 1075 aa14.11□□□□□ -0.15
CXCL12-202ENST00000374426 SPACA3Q8IXA5 215 aa14.11□□□□□ -0.15
CXCL12-202ENST00000374426 DCAF4L2Q8NA75 395 aa14.11□□□□□ -0.15
CXCL12-202ENST00000374426 ZNF397Q8NF99 534 aaPredicted RBP14.11□□□□□ -0.15
CXCL12-202ENST00000374426 GRIN3AQ8TCU5 1115 aa14.11□□□□□ -0.15
CXCL12-202ENST00000374426 NT5C3BQ969T7 300 aa14.11□□□□□ -0.15
CXCL12-202ENST00000374426 CCDC114Q96M63 670 aa14.11□□□□□ -0.15
CXCL12-202ENST00000374426 CALN1Q9BXU9 219 aa14.11□□□□□ -0.15
CXCL12-202ENST00000374426 HDAC8Q9BY41 377 aa14.11□□□□□ -0.15
CXCL12-202ENST00000374426 WDCPQ9H6R7 721 aa14.11□□□□□ -0.15
CXCL12-202ENST00000374426 LY6G6EA0A0G2JKS1 128 aa14.1□□□□□ -0.15
CXCL12-202ENST00000374426 DRGXA6NNA5 263 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms