RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 AGTR2P50052 363 aa6.16□□□□□ -1.42
RNU4-39P-201ENST00000362455 WDR5P61964 334 aaKnown RBP6.16□□□□□ -1.42
RNU4-39P-201ENST00000362455 GAB1Q13480 694 aa6.16□□□□□ -1.42
RNU4-39P-201ENST00000362455 ZNF169Q14929 603 aaPredicted RBP6.16□□□□□ -1.42
RNU4-39P-201ENST00000362455 HYIQ5T013 277 aa6.16□□□□□ -1.42
RNU4-39P-201ENST00000362455 BCDIN3DQ7Z5W3 292 aaKnown RBP6.16□□□□□ -1.42
RNU4-39P-201ENST00000362455 TERB1Q8NA31 727 aa6.16□□□□□ -1.42
RNU4-39P-201ENST00000362455 TBC1D5Q92609 795 aa6.16□□□□□ -1.42
RNU4-39P-201ENST00000362455 AKAP1Q92667 903 aaKnown RBP eCLIP6.16□□□□□ -1.42
RNU4-39P-201ENST00000362455 ZNF622Q969S3 477 aaKnown RBP eCLIP6.16□□□□□ -1.42
RNU4-39P-201ENST00000362455 PPP1R10Q96QC0 940 aaKnown RBP6.16□□□□□ -1.42
RNU4-39P-201ENST00000362455 NPAS1Q99742 590 aa6.16□□□□□ -1.42
RNU4-39P-201ENST00000362455 PAIP1Q9H074 479 aaKnown RBP6.16□□□□□ -1.42
RNU4-39P-201ENST00000362455 PREBQ9HCU5 417 aa6.16□□□□□ -1.42
RNU4-39P-201ENST00000362455 ZNF831Q5JPB2 1677 aa6.16□□□□□ -1.42
RNU4-39P-201ENST00000362455 CNTNAP1P78357 1384 aa6.16□□□□□ -1.42
RNU4-39P-201ENST00000362455 COL5A3P25940 1745 aaPredicted RBP6.16□□□□□ -1.42
RNU4-39P-201ENST00000362455 PEX12O00623 359 aa6.15□□□□□ -1.42
RNU4-39P-201ENST00000362455 PRRG2O14669 202 aa6.15□□□□□ -1.42
RNU4-39P-201ENST00000362455 ZNF213O14771 459 aa6.15□□□□□ -1.42
RNU4-39P-201ENST00000362455 EXOC3O60645 756 aa6.15□□□□□ -1.42
RNU4-39P-201ENST00000362455 IFIT1P09914 478 aaKnown RBP6.15□□□□□ -1.42
RNU4-39P-201ENST00000362455 IGFBP2P18065 325 aa6.15□□□□□ -1.42
RNU4-39P-201ENST00000362455 SLC8A1P32418 973 aa6.15□□□□□ -1.42
RNU4-39P-201ENST00000362455 PLA2G5P39877 138 aa6.15□□□□□ -1.42
RNU4-39P-201ENST00000362455 PIP4K2AP48426 406 aaPredicted RBP6.15□□□□□ -1.42
RNU4-39P-201ENST00000362455 RXRGP48443 463 aa6.15□□□□□ -1.42
RNU4-39P-201ENST00000362455 CDK18Q07002 472 aa6.15□□□□□ -1.42
RNU4-39P-201ENST00000362455 THOC5Q13769 683 aaKnown RBP6.15□□□□□ -1.42
RNU4-39P-201ENST00000362455 MFSD13AQ14CX5 517 aa6.15□□□□□ -1.42
RNU4-39P-201ENST00000362455 DENND1BQ6P3S1 775 aa6.15□□□□□ -1.42
RNU4-39P-201ENST00000362455 ZNF804AQ7Z570 1209 aa6.15□□□□□ -1.42
RNU4-39P-201ENST00000362455 PCGF5Q86SE9 256 aa6.15□□□□□ -1.42
RNU4-39P-201ENST00000362455 RASAL3Q86YV0 1011 aa6.15□□□□□ -1.42
RNU4-39P-201ENST00000362455 LAS2Q8IYD9 372 aa6.15□□□□□ -1.42
RNU4-39P-201ENST00000362455 HDAC2Q92769 488 aaKnown RBP6.15□□□□□ -1.42
RNU4-39P-201ENST00000362455 ZUFSPQ96AP4 578 aa6.15□□□□□ -1.42
RNU4-39P-201ENST00000362455 HS6ST2Q96MM7 605 aa6.15□□□□□ -1.42
RNU4-39P-201ENST00000362455 ZNF747Q9BV97 191 aa6.15□□□□□ -1.42
RNU4-39P-201ENST00000362455 ADGRE3Q9BY15 652 aa6.15□□□□□ -1.42
RNU4-39P-201ENST00000362455 RNF26Q9BY78 433 aaPredicted RBP6.15□□□□□ -1.42
RNU4-39P-201ENST00000362455 ACAD9Q9H845 621 aa6.15□□□□□ -1.42
RNU4-39P-201ENST00000362455 ASIC5Q9NY37 505 aa6.15□□□□□ -1.42
RNU4-39P-201ENST00000362455 B3GNT3Q9Y2A9 372 aa6.15□□□□□ -1.42
RNU4-39P-201ENST00000362455 GDAQ9Y2T3 454 aa6.15□□□□□ -1.42
RNU4-39P-201ENST00000362455 ZNF541Q9H0D2 1346 aa6.15□□□□□ -1.43
RNU4-39P-201ENST00000362455 BRCA1P38398 1863 aaKnown RBP6.15□□□□□ -1.43
RNU4-39P-201ENST00000362455 MRC1P22897 1456 aa6.15□□□□□ -1.43
RNU4-39P-201ENST00000362455 TJP1Q07157 1748 aa6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 ANP32CO43423 234 aa6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 MT-CO3P00414 261 aa6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 SLC3A2P08195 630 aaKnown RBP6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 ADH4P08319 380 aa6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 LYL1P12980 280 aa6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 NDUFS1P28331 727 aa6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 PSMC2P35998 433 aaKnown RBP6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 PGM1P36871 562 aa6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 STAT6P42226 847 aa6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 LBX1P52954 281 aa6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 SIM1P81133 766 aaPredicted RBP6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 GALNT2Q10471 571 aa6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 CNGA3Q16281 694 aa6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 LCE4AQ5TA78 99 aa6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 HECTD2Q5U5R9 776 aa6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 LIPMQ5VYY2 423 aa6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 ZNF790Q6PG37 636 aa6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 SLC39A5Q6ZMH5 540 aa6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 SLC29A4Q7RTT9 530 aa6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 TBC1D1Q86TI0 1168 aaPredicted RBP6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 SRFBP1Q8NEF9 429 aaKnown RBP6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 SLC9A6Q92581 669 aa6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 HTATIP2Q9BUP3 242 aa6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 KRTAP9-9Q9BYP9 154 aa6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 KRTAP9-4Q9BYQ2 154 aa6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 TAOK3Q9H2K8 898 aa6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 STN1Q9H668 368 aaKnown RBP6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 IL21RQ9HBE5 538 aa6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 TLR8Q9NR97 1041 aaKnown RBP6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 IRAK4Q9NWZ3 460 aa6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 MTMR4Q9NYA4 1195 aa6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 SEMA5BQ9P283 1151 aa6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 FBXO9Q9UK97 447 aaPredicted RBP6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 USP16Q9Y5T5 823 aa6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 NCANO14594 1321 aa6.14□□□□□ -1.43
RNU4-39P-201ENST00000362455 KIF20BQ96Q89 1820 aa6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 TTC34A8MYJ7 566 aa6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 CLIC1O00299 241 aa6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 PRYO14603 147 aa6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 MGST3O14880 152 aa6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 DHX16O60231 1041 aaKnown RBP6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 STARD3NLO95772 234 aa6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 WEE2P0C1S8 567 aa6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 HSPA8P11142 646 aaKnown RBP6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 TNNT1P13805 278 aa6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 ATF7P17544 494 aaPredicted RBP6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 CAPN3P20807 821 aa6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 SFPQP23246 707 aaKnown RBP eCLIP6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 CASP2P42575 452 aa6.13□□□□□ -1.43
RNU4-39P-201ENST00000362455 SLC37A1P57057 533 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms