RNA–Protein interactions for RNA: ENST00000641321.1

CASC19-222, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,173 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-222	ENST00000641321	TCEAL9	Q9UHQ7	104 aa		5.89	□□□□□ -1.47
CASC19-222	ENST00000641321	SPO11	Q9Y5K1	396 aa		5.89	□□□□□ -1.47
CASC19-222	ENST00000641321	COMMD10	Q9Y6G5	202 aa		5.89	□□□□□ -1.47
CASC19-222	ENST00000641321	SF3B1	O75533	1304 aa	Known RBP eCLIP	5.89	□□□□□ -1.47
CASC19-222	ENST00000641321	TTC41P	Q6P2S7	1318 aa		5.89	□□□□□ -1.47
CASC19-222	ENST00000641321	DENND4C	Q5VZ89	1909 aa		5.89	□□□□□ -1.47
CASC19-222	ENST00000641321	PCDH15	Q96QU1	1955 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	hCG_2014768	A0A024R1R8	64 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	MYBPHL	A2RUH7	354 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	SPECC1L-ADORA2A	F8WAN1	911 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	MEIS2	O14770	477 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	CHAD	O15335	359 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	OPHN1	O60890	802 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	POMC	P01189	267 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	HSP90AA1	P07900	732 aa	Known RBP	5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	RHO	P08100	348 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	PTPN2	P17706	415 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	FCAR	P24071	287 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	MGAT1	P26572	445 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	GZMK	P49863	264 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	SEC24C	P53992	1094 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	HAND2	P61296	217 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	IRX4	P78413	519 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	MAPK6	Q16659	721 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	VPS53	Q5VIR6	699 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	ABHD17B	Q5VST6	288 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	PAPD7	Q5XG87	772 aa	Known RBP	5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	PMS2CL	Q68D20	193 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	SP5	Q6BEB4	398 aa	Predicted RBP	5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	FUT10	Q6P4F1	479 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	USP17L6P	Q6QN14	398 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	VIT	Q6UXI7	678 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	HAUS6	Q7Z4H7	955 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	MFSD6L	Q8IWD5	586 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	ZZZ3	Q8IYH5	903 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	COLGALT2	Q8IYK4	626 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	NXPE1	Q8N323	547 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	LILRA3	Q8N6C8	439 aa	Predicted RBP	5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	SMARCD2	Q92925	531 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	CPEB1	Q9BZB8	566 aa	Known RBP	5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	GPR88	Q9GZN0	384 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	ZMAT4	Q9H898	229 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	HELLS	Q9NRZ9	838 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	INTS7	Q9NVH2	962 aa	Known RBP	5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	HCFC1R1	Q9NWW0	138 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	KLHL42	Q9P2K6	505 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	MAD2L2	Q9UI95	211 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	ADAM28	Q9UKQ2	775 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	APOBEC2	Q9Y235	224 aa	Known RBP	5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	PCDHB2	Q9Y5E7	798 aa		5.88	□□□□□ -1.47
CASC19-222	ENST00000641321	SLC38A8	A6NNN8	435 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	ENO4	A6NNW6	628 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321		E9PAM4	449 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	ZNF213	O14771	459 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	EXTL3	O43909	919 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	PRPF6	O94906	941 aa	Known RBP	5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	APBB3	O95704	486 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	GAA	P10253	952 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	CEBPB	P17676	345 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	ENG	P17813	658 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	RPL17	P18621	184 aa	Known RBP	5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	FGFR4	P22455	802 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	XPA	P23025	273 aa	Predicted RBP	5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	HOXD12	P35452	270 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	CASR	P41180	1078 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	PXN	P49023	591 aa	Predicted RBP	5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	DSC1	Q08554	894 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	ELAVL2	Q12926	359 aa	Known RBP	5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	TCEA2	Q15560	299 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	PSMD5	Q16401	504 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	BEAN1	Q3B7T3	259 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	FAM78A	Q5JUQ0	283 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	LMBRD2	Q68DH5	695 aa	Predicted RBP	5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	ABHD15	Q6UXT9	468 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	PDZD4	Q76G19	769 aa	Predicted RBP	5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	CATSPER4	Q7RTX7	472 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	KANSL1	Q7Z3B3	1105 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	MRPL10	Q7Z7H8	261 aa	Known RBP	5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	ZNF410	Q86VK4	478 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	CCDC60	Q8IWA6	550 aa	Predicted RBP	5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	HACE1	Q8IYU2	909 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	LINC01465	Q8N7H1	131 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	LEMD2	Q8NC56	503 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	CPEB3	Q8NE35	698 aa	Known RBP	5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	CHTF18	Q8WVB6	975 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	LINC00476	Q8WZB0	136 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	EXOC4	Q96A65	974 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	MXRA8	Q9BRK3	442 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	ORAI3	Q9BRQ5	295 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	PI4K2A	Q9BTU6	479 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	KRT23	Q9C075	422 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	ENKD1	Q9H0I2	346 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	TRPV4	Q9HBA0	871 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	SYBU	Q9NX95	663 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	USP36	Q9P275	1121 aa	Known RBP	5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	SEC63	Q9UGP8	760 aa	Known RBP	5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	TLK1	Q9UKI8	766 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	EPN1	Q9Y6I3	576 aa	Predicted RBP	5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	NEDD4	P46934	1319 aa		5.87	□□□□□ -1.47
CASC19-222	ENST00000641321	TRIP11	Q15643	1979 aa		5.87	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms