RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 TBC1D3KA0A087X1G2 549 aa16.62■□□□□ 0.25
CACNA1A-238ENST00000637276 TBC1D3FA6NER0 549 aaPredicted RBP16.62■□□□□ 0.25
CACNA1A-238ENST00000637276 TBC1D3LB9A6J9 549 aa16.62■□□□□ 0.25
CACNA1A-238ENST00000637276 TBC1D3HP0C7X1 549 aa16.62■□□□□ 0.25
CACNA1A-238ENST00000637276 UBA1P22314 1058 aaKnown RBP16.62■□□□□ 0.25
CACNA1A-238ENST00000637276 SERPINB8P50452 374 aa16.62■□□□□ 0.25
CACNA1A-238ENST00000637276 PREPLQ4J6C6 727 aaPredicted RBP16.62■□□□□ 0.25
CACNA1A-238ENST00000637276 ATP13A4Q4VNC1 1196 aa16.62■□□□□ 0.25
CACNA1A-238ENST00000637276 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.62■□□□□ 0.25
CACNA1A-238ENST00000637276 MAP1SQ66K74 1059 aaPredicted RBP16.62■□□□□ 0.25
CACNA1A-238ENST00000637276 TBC1D3GQ6DHY5 549 aa16.62■□□□□ 0.25
CACNA1A-238ENST00000637276 TBC1D3CQ6IPX1 549 aa16.62■□□□□ 0.25
CACNA1A-238ENST00000637276 CLEC4GQ6UXB4 293 aa16.62■□□□□ 0.25
CACNA1A-238ENST00000637276 SLC47A2Q86VL8 602 aa16.62■□□□□ 0.25
CACNA1A-238ENST00000637276 TBC1D3Q8IZP1 549 aaPredicted RBP16.62■□□□□ 0.25
CACNA1A-238ENST00000637276 TTC39CQ8N584 583 aa16.62■□□□□ 0.25
CACNA1A-238ENST00000637276 TMEM237Q96Q45 408 aa16.62■□□□□ 0.25
CACNA1A-238ENST00000637276 ABCB9Q9NP78 766 aa16.62■□□□□ 0.25
CACNA1A-238ENST00000637276 TRMT13Q9NUP7 481 aaKnown RBP16.62■□□□□ 0.25
CACNA1A-238ENST00000637276 TAF6LQ9Y6J9 622 aa16.62■□□□□ 0.25
CACNA1A-238ENST00000637276 A8MU76 341 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 KCNA5P22460 613 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 ZNHIT3Q15649 155 aaPredicted RBP16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 TRIM40Q6P9F5 258 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 ZZZ3Q8IYH5 903 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 KLK6Q92876 244 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 ARMC5Q96C12 935 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 HGH1Q9BTY7 390 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 RASSF1Q9NS23 344 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 KLQ9UEF7 1012 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 SLC16A3O15427 465 aaKnown RBP16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 IL18RAPO95256 599 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 GJB6O95452 261 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 RPS6KA3P51812 740 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 LPCAT2Q7L5N7 544 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 LINC00523Q86TU6 105 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 DEFB129Q9H1M3 183 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 LYNP07948 512 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 KLRC1P26715 233 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 DNASE1L1P49184 302 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 ZDHHC20Q5W0Z9 365 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 RUSC1Q9BVN2 902 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 CEP44Q9C0F1 390 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 FCHO1O14526 889 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 NQO1P15559 274 aaKnown RBP16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 CBX5P45973 191 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 PKNOX1P55347 436 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 PERM1Q5SV97 790 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 SLC30A10Q6XR72 485 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 ZNF433Q8N7K0 673 aaPredicted RBP16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 RSAD1Q9HA92 442 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 ARL15Q9NXU5 204 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 CCNOP22674 350 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 AMZ1Q400G9 498 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 PSRC1Q6PGN9 363 aaPredicted RBP16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 IZUMO2Q6UXV1 221 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 ZBTB49Q6ZSB9 765 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 MAGEE2Q8TD90 523 aaPredicted RBP16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 CENPIQ92674 756 aaPredicted RBP16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 TMEM8AQ9HCN3 771 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 BTRCQ9Y297 605 aa16.61■□□□□ 0.25
CACNA1A-238ENST00000637276 SCGB1D2O95969 90 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 SEMA3AQ14563 771 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 BEND4Q6ZU67 534 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 ENGASEQ8NFI3 743 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 IQCF5A8MTL0 148 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 CCL16O15467 120 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 MGAT1P26572 445 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 FCRL4Q96PJ5 515 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 CNOT6Q9ULM6 557 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 PSMD13Q9UNM6 376 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 ZNF232Q9UNY5 417 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 SAMD9Q5K651 1589 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 AMHP03971 560 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 CHRNGP07510 517 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 ACAD10Q6JQN1 1059 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 NDNQ99608 321 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 KIF2CQ99661 725 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 BMP10O95393 424 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 PRKAR2AP13861 404 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 STX5Q13190 355 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 KCNA10Q16322 511 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 KCNV1Q6PIU1 500 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 DEFB107AQ8IZN7 70 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 DAGLAQ9Y4D2 1042 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 ZNF16P17020 682 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 GNALP38405 381 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 PDX1P52945 283 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 ZNF543Q08ER8 600 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 TSEN15Q8WW01 171 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 C5orf34Q96MH7 638 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 TCOF1Q13428 1488 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 A0A087WZ62 844 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 MAGEB3O15480 346 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 RPA3P35244 121 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 HPCAL1P37235 193 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 SQLEQ14534 574 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 SCUBE3Q8IX30 993 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 TBC1D16Q8TBP0 767 aa16.6■□□□□ 0.25
CACNA1A-238ENST00000637276 FDXACB1Q9BRP7 624 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms