RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 VAPBO95292 243 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 HLA-DQA1Q5Y7H0 255 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 MILR1Q7Z6M3 343 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 QKIQ96PU8 341 aaKnown RBP eCLIP9.25□□□□□ -0.937e-33■■■■■ 356
CSMD1-218ENST00000635120 NUDT5Q9UKK9 219 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 TBKBP1A7MCY6 615 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 TNNI3P19429 210 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 DNAJB2P25686 324 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 MZT2BQ6NZ67 158 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-218ENST00000635120 A0A087WZ62 844 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 PSMG1O95456 288 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 GTF2A2P52657 109 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 S100A13Q99584 98 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 ALG9Q9H6U8 611 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 GAKO14976 1311 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 KHDRBS3O75525 346 aaKnown RBP9.25□□□□□ -0.93
CSMD1-218ENST00000635120 HNMTP50135 292 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 RPL14P50914 215 aaKnown RBP9.25□□□□□ -0.93
CSMD1-218ENST00000635120 LGALS3BPQ08380 585 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 SREBF2Q12772 1141 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 NAB1Q13506 487 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 FAM43BQ6ZT52 329 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-218ENST00000635120 SAMD7Q7Z3H4 446 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 CAMKK1Q8N5S9 505 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 ATXN3LQ9H3M9 355 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 ANAPC2Q9UJX6 822 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 KCNK1O00180 336 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 STAT5AP42229 794 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 CYP4F2P78329 520 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 CYP4F3Q08477 520 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 PYDC2Q56P42 97 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 MFSD7Q6UXD7 560 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 ITIH5Q86UX2 942 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 MCOLN3Q8TDD5 553 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 TATDN2Q93075 761 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 MCUBQ9NWR8 336 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 ZNF112Q9UJU3 913 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 RGS14O43566 566 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 ECDO95905 644 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-218ENST00000635120 FGRP09769 529 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 NDST1P52848 882 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 SGCGQ13326 291 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 TTC7BQ86TV6 843 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 TMC2Q8TDI7 906 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 HGH1Q9BTY7 390 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 KCNK4Q9NYG8 393 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 MTA2O94776 668 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 TAL1P17542 331 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-218ENST00000635120 GRIA3P42263 894 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 PTDSS1P48651 473 aaKnown RBP9.25□□□□□ -0.93
CSMD1-218ENST00000635120 FIGNQ5HY92 759 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 MAGEE2Q8TD90 523 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-218ENST00000635120 ACTRT2Q8TDY3 377 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 ABCB10Q9NRK6 738 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 ARL15Q9NXU5 204 aa9.25□□□□□ -0.93
CSMD1-218ENST00000635120 RPN2P04844 631 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 ERVK-9P63128 1117 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 UTS2BQ765I0 119 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 BTN2A1Q7KYR7 527 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 PCDHA3Q9Y5H8 950 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 PSMD11O00231 422 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 TFRCP02786 760 aaKnown RBP9.24□□□□□ -0.93
CSMD1-218ENST00000635120 ATP5BP06576 529 aaKnown RBP9.24□□□□□ -0.93
CSMD1-218ENST00000635120 ADRA1DP25100 572 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 TCEA2Q15560 299 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 SYT15Q9BQS2 421 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 TMEM138Q9NPI0 162 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 SMPD4Q9NXE4 827 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 PSIP1O75475 530 aaKnown RBP9.24□□□□□ -0.93
CSMD1-218ENST00000635120 ACAT1P24752 427 aaKnown RBP9.24□□□□□ -0.93
CSMD1-218ENST00000635120 ABCG1P45844 678 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 MOXD1Q6UVY6 613 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 PPP1R14BQ96C90 147 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 OPTCQ9UBM4 332 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 ZNF222Q9UK12 451 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 PCP4L1A6NKN8 68 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 AP3D1O14617 1153 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 AHCYL1O43865 530 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 RARAP10276 462 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 FBXO30Q8TB52 745 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 HDAC7Q8WUI4 952 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 SAR1AQ9NR31 198 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 LRRC4BQ9NT99 713 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 H3BMM5 538 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 SEC24AO95486 1093 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 MMP13P45452 471 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 NFE2Q16621 373 aaPredicted RBP9.24□□□□□ -0.93
CSMD1-218ENST00000635120 TEKT5Q96M29 485 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 MMADHCQ9H3L0 296 aaPredicted RBP9.24□□□□□ -0.93
CSMD1-218ENST00000635120 ZFYVE1Q9HBF4 777 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 NDOR1Q9UHB4 597 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 SMIM22K7EJ46 135 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 HOXA2O43364 376 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 FCGRTP55899 365 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 PLD1Q13393 1074 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 FAM187BQ17R55 369 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 ZIK1Q3SY52 487 aaPredicted RBP9.24□□□□□ -0.93
CSMD1-218ENST00000635120 EPB41L1Q9H4G0 881 aa9.24□□□□□ -0.93
CSMD1-218ENST00000635120 NTSR2O95665 410 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms