RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 IRGQQ8WZA9 623 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 AZIN2Q96A70 460 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 FAM149B1Q96BN6 582 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 NAF1Q96HR8 494 aaKnown RBP8.08□□□□□ -1.12
CLK1-215ENST00000621181 SERPINB11Q96P15 392 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 MED15Q96RN5 788 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 TJP2Q9UDY2 1190 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 KIAA1257Q9ULG3 409 aa8.08□□□□□ -1.12
CLK1-215ENST00000621181 DOCK9Q9BZ29 2069 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 CAPN8A6NHC0 703 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 J3QKU1 62 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 M0QYV0 167 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 ERVH48-1M5A8F1 160 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 FBXO21O94952 628 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 ZNF18P17022 549 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 TBXAS1P24557 533 aaPredicted RBP8.07□□□□□ -1.12
CLK1-215ENST00000621181 ACP1P24666 158 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 DRD3P35462 400 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 STK19P49842 368 aaPredicted RBP8.07□□□□□ -1.12
CLK1-215ENST00000621181 DAB2P98082 770 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 E2F1Q01094 437 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 MYL5Q02045 173 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 DPYDQ12882 1025 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 TBX2Q13207 712 aaPredicted RBP8.07□□□□□ -1.12
CLK1-215ENST00000621181 PKDCCQ504Y2 493 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 ZCWPW2Q504Y3 356 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 DCAF6Q58WW2 860 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 MS4A13Q5J8X5 152 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 BROXQ5VW32 411 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 TMEM270Q6UE05 265 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 LCLAT1Q6UWP7 414 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 TMC6Q7Z403 805 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 DSG4Q86SJ6 1040 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 IQCHQ86VS3 1027 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 SPATS2Q86XZ4 545 aaKnown RBP8.07□□□□□ -1.12
CLK1-215ENST00000621181 VSTM4Q8IW00 320 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 APCDD1Q8J025 514 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 LGI2Q8N0V4 545 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 DCBLD1Q8N8Z6 715 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 ZNF248Q8NDW4 579 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 SLC35F5Q8WV83 523 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 RFFLQ8WZ73 363 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 PTPRN2Q92932 1015 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 MYEOVQ96EZ4 313 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 PPP1R13BQ96KQ4 1090 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 SPAG5Q96R06 1193 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 FAM129BQ96TA1 746 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 MIS12Q9H081 205 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 FAM53CQ9NYF3 392 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 PRDM4Q9UKN5 801 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 TLR6Q9Y2C9 796 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 ITIH6Q6UXX5 1313 aa8.07□□□□□ -1.12
CLK1-215ENST00000621181 TDRD6O60522 2096 aaKnown RBP8.07□□□□□ -1.12
CLK1-215ENST00000621181 TENM4Q6N022 2769 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 KIF2AO00139 706 aaPredicted RBP8.06□□□□□ -1.12
CLK1-215ENST00000621181 SIGLEC6O43699 453 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 RTN2O75298 545 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 MT-CO3P00414 261 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 APOEP02649 317 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 MPOP05164 745 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 PAEPP09466 180 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 VAV1P15498 845 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 NUDT1P36639 197 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 METAP1P53582 386 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 PCBP4P57723 403 aaKnown RBP8.06□□□□□ -1.12
CLK1-215ENST00000621181 ZNF211Q13398 564 aaPredicted RBP8.06□□□□□ -1.12
CLK1-215ENST00000621181 NNTQ13423 1086 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 MORC3Q14149 939 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 POM121L1PQ3SYA9 428 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 CHSY1Q86X52 802 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 TMEM139Q8IV31 216 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 SMYD4Q8IYR2 804 aaPredicted RBP8.06□□□□□ -1.12
CLK1-215ENST00000621181 CACTIN-AS1Q8N1I8 211 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 DQX1Q8TE96 717 aaKnown RBP8.06□□□□□ -1.12
CLK1-215ENST00000621181 TFAP2BQ92481 460 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 FCRL2Q96LA5 508 aaPredicted RBP8.06□□□□□ -1.12
CLK1-215ENST00000621181 KDM4CQ9H3R0 1056 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 ARHGAP20Q9P2F6 1191 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 XPO7Q9UIA9 1087 aaKnown RBP8.06□□□□□ -1.12
CLK1-215ENST00000621181 MAN1B1Q9UKM7 699 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 DMTF1Q9Y222 760 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 COQ4Q9Y3A0 265 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 NYNRINQ9P2P1 1898 aaKnown RBP8.06□□□□□ -1.12
CLK1-215ENST00000621181 C10orf142B7Z368 130 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 TRIM38O00635 465 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 FANCGO15287 622 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 FFAR2O15552 330 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 SLC7A4O43246 635 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 PLRG1O43660 514 aaKnown RBP8.06□□□□□ -1.12
CLK1-215ENST00000621181 SMC2O95347 1197 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 UCNP55089 124 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 TMPRSS3P57727 454 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 MCCD1P59942 119 aaPredicted RBP8.06□□□□□ -1.12
CLK1-215ENST00000621181 SULT2A1Q06520 285 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 STILQ15468 1287 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 PROX2Q3B8N5 592 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 ACCSLQ4AC99 568 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 SETMARQ53H47 684 aaPredicted RBP8.06□□□□□ -1.12
CLK1-215ENST00000621181 ARHGAP40Q5TG30 622 aa8.06□□□□□ -1.12
CLK1-215ENST00000621181 FAM46CQ5VWP2 391 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms