RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 NRDE2Q9H7Z3 1164 aa5.91□□□□□ -1.46
SDF2-206ENST00000587788 USP29Q9HBJ7 922 aa5.91□□□□□ -1.46
SDF2-206ENST00000587788 RXFP1Q9HBX9 757 aa5.91□□□□□ -1.46
SDF2-206ENST00000587788 NGRNQ9NPE2 291 aaKnown RBP5.91□□□□□ -1.46
SDF2-206ENST00000587788 PRDM6Q9NQX0 595 aa5.91□□□□□ -1.46
SDF2-206ENST00000587788 DNAJB12Q9NXW2 375 aaKnown RBP5.91□□□□□ -1.46
SDF2-206ENST00000587788 RRN3Q9NYV6 651 aa5.91□□□□□ -1.46
SDF2-206ENST00000587788 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.91□□□□□ -1.46
SDF2-206ENST00000587788 TJP2Q9UDY2 1190 aa5.91□□□□□ -1.46
SDF2-206ENST00000587788 PRKAG3Q9UGI9 489 aa5.91□□□□□ -1.46
SDF2-206ENST00000587788 TUBGCP4Q9UGJ1 667 aa5.91□□□□□ -1.46
SDF2-206ENST00000587788 TBK1Q9UHD2 729 aa5.91□□□□□ -1.46
SDF2-206ENST00000587788 CDH9Q9ULB4 789 aa5.91□□□□□ -1.46
SDF2-206ENST00000587788 STAP1Q9ULZ2 295 aa5.91□□□□□ -1.46
SDF2-206ENST00000587788 SLC12A4Q9UP95 1085 aa5.91□□□□□ -1.46
SDF2-206ENST00000587788 MRPL42Q9Y6G3 142 aaKnown RBP5.91□□□□□ -1.46
SDF2-206ENST00000587788 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.91□□□□□ -1.46
SDF2-206ENST00000587788 SF3B1O75533 1304 aaKnown RBP eCLIP5.91□□□□□ -1.46
SDF2-206ENST00000587788 C2orf16Q68DN1 1984 aa5.91□□□□□ -1.46
SDF2-206ENST00000587788 MYO7AQ13402 2215 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 ANKRD65E5RJM6 399 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 H3BRJ5 948 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 SYN3O14994 580 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 NCAM2O15394 837 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 KCNN4O15554 427 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 PAPSS1O43252 624 aaPredicted RBP5.9□□□□□ -1.46
SDF2-206ENST00000587788 MTSS1O43312 755 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 TYROBPO43914 113 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 B4GALT3O60512 393 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 DAB1O75553 588 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 RASSF9O75901 435 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 DCTN3O75935 186 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 KRT38O76015 456 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 OAZ2O95190 189 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 IL1BP01584 269 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 CD48P09326 243 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 MLNP12872 115 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 CA4P22748 312 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 ITPKAP23677 461 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 IL4RP24394 825 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 CYP2F1P24903 491 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 CNTFP26441 200 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 GSTT1P30711 240 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 L1CAMP32004 1257 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 FDFT1P37268 417 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 PBX3P40426 434 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 MAP2K3P46734 347 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 HCAR3P49019 387 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 RGS7P49802 495 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 SERPINB9P50453 376 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 RASSF2P50749 326 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 AFF1P51825 1210 aaKnown RBP5.9□□□□□ -1.46
SDF2-206ENST00000587788 HDAC4P56524 1084 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 ATP11AP98196 1134 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 SOX4Q06945 474 aaPredicted RBP5.9□□□□□ -1.46
SDF2-206ENST00000587788 DSC1Q08554 894 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 DNAJC3Q13217 504 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 NAB1Q13506 487 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 RIPK1Q13546 671 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 MPP2Q14168 576 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 BTG3Q14201 252 aaPredicted RBP5.9□□□□□ -1.46
SDF2-206ENST00000587788 LRRC14Q15048 493 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 CCDC85BQ15834 202 aaPredicted RBP5.9□□□□□ -1.46
SDF2-206ENST00000587788 PCSK7Q16549 785 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 C15orf59Q2T9L4 293 aaPredicted RBP5.9□□□□□ -1.46
SDF2-206ENST00000587788 BBS9Q3SYG4 887 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 GALNTL6Q49A17 601 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 TIGD5Q53EQ6 642 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 FNBP1LQ5T0N5 605 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 UBAP2Q5T6F2 1119 aaKnown RBP5.9□□□□□ -1.46
SDF2-206ENST00000587788 ZNF449Q6P9G9 518 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 PRUNE1Q86TP1 453 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 SLC26A11Q86WA9 606 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 COLGALT2Q8IYK4 626 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 GPR65Q8IYL9 337 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 DCP1BQ8IZD4 617 aaKnown RBP5.9□□□□□ -1.46
SDF2-206ENST00000587788 ADGRF2Q8IZF7 708 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 FIBCD1Q8N539 461 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 PQLC3Q8N755 202 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 C12orf29Q8N999 325 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 MAFAQ8NHW3 353 aaPredicted RBP5.9□□□□□ -1.46
SDF2-206ENST00000587788 PCDH19Q8TAB3 1148 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 DCAKDQ8WVC6 231 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 SLC44A1Q8WWI5 657 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 CASD1Q96PB1 797 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 QKIQ96PU8 341 aaKnown RBP eCLIP5.9□□□□□ -1.46
SDF2-206ENST00000587788 HHIPQ96QV1 700 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 PEBP4Q96S96 227 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 PAFAH2Q99487 392 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 TUBB6Q9BUF5 446 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 SNRNP25Q9BV90 132 aaKnown RBP5.9□□□□□ -1.46
SDF2-206ENST00000587788 TRIM62Q9BVG3 475 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 LIN7BQ9HAP6 207 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 EIF2B3Q9NR50 452 aaKnown RBP5.9□□□□□ -1.46
SDF2-206ENST00000587788 KLC4Q9NSK0 619 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 TXLNGQ9NUQ3 528 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 TBC1D13Q9NVG8 400 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 FGFR1OP2Q9NVK5 253 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 MKS1Q9NXB0 559 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 DDX43Q9NXZ2 648 aaKnown RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms