RNA–Protein interactions for RNA: ENST00000575671.5

TRAP1-212, Transcript of TNF receptor associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAP1, Length 2,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-212ENST00000575671 CSH2P0DML3 217 aa12.96□□□□□ -0.33
TRAP1-212ENST00000575671 HMGA1P17096 107 aaKnown RBP12.96□□□□□ -0.33
TRAP1-212ENST00000575671 PGAM1P18669 254 aa12.96□□□□□ -0.33
TRAP1-212ENST00000575671 RPA3P35244 121 aaPredicted RBP12.96□□□□□ -0.33
TRAP1-212ENST00000575671 KPNA1P52294 538 aaPredicted RBP12.96□□□□□ -0.33
TRAP1-212ENST00000575671 HECTD3Q5T447 861 aa12.96□□□□□ -0.33
TRAP1-212ENST00000575671 AFMIDQ63HM1 303 aa12.96□□□□□ -0.33
TRAP1-212ENST00000575671 NUGGCQ68CJ6 796 aa12.96□□□□□ -0.33
TRAP1-212ENST00000575671 KCTD11Q693B1 232 aa12.96□□□□□ -0.33
TRAP1-212ENST00000575671 TIGD7Q6NT04 549 aaPredicted RBP12.96□□□□□ -0.33
TRAP1-212ENST00000575671 CES3Q6UWW8 571 aa12.96□□□□□ -0.33
TRAP1-212ENST00000575671 DDX53Q86TM3 631 aaKnown RBP12.96□□□□□ -0.33
TRAP1-212ENST00000575671 PARP9Q8IXQ6 854 aa12.96□□□□□ -0.33
TRAP1-212ENST00000575671 PDZD8Q8NEN9 1154 aa12.96□□□□□ -0.33
TRAP1-212ENST00000575671 MZB1Q8WU39 189 aa12.96□□□□□ -0.33
TRAP1-212ENST00000575671 HMCESQ96FZ2 354 aa12.96□□□□□ -0.33
TRAP1-212ENST00000575671 OXNAD1Q96HP4 312 aaPredicted RBP12.96□□□□□ -0.33
TRAP1-212ENST00000575671 CDK5RAP1Q96SZ6 601 aaKnown RBP12.96□□□□□ -0.33
TRAP1-212ENST00000575671 TMEM248Q9NWD8 314 aa12.96□□□□□ -0.33
TRAP1-212ENST00000575671 NYNRINQ9P2P1 1898 aaKnown RBP12.96□□□□□ -0.33
TRAP1-212ENST00000575671 IGLV3-10A0A075B6K4 115 aa12.96□□□□□ -0.34
TRAP1-212ENST00000575671 ERI2A8K979 691 aaKnown RBP12.96□□□□□ -0.34
TRAP1-212ENST00000575671 PRPF4O43172 522 aaKnown RBP eCLIP12.96□□□□□ -0.34
TRAP1-212ENST00000575671 COCHO43405 550 aa12.96□□□□□ -0.34
TRAP1-212ENST00000575671 SUN1O94901 812 aa12.96□□□□□ -0.34
TRAP1-212ENST00000575671 MT-CYBP00156 380 aaPredicted RBP12.96□□□□□ -0.34
TRAP1-212ENST00000575671 MT-ND3P03897 115 aa12.96□□□□□ -0.34
TRAP1-212ENST00000575671 ELF1P32519 619 aa12.96□□□□□ -0.34
TRAP1-212ENST00000575671 TWF1Q12792 350 aa12.96□□□□□ -0.34
TRAP1-212ENST00000575671 SF3A3Q12874 501 aaKnown RBP eCLIP12.96□□□□□ -0.346e-8■■■■□ 20.8
TRAP1-212ENST00000575671 CRYMQ14894 314 aa12.96□□□□□ -0.34
TRAP1-212ENST00000575671 VEPH1Q14D04 833 aa12.96□□□□□ -0.34
TRAP1-212ENST00000575671 SNCBQ16143 134 aa12.96□□□□□ -0.34
TRAP1-212ENST00000575671 NADSYN1Q6IA69 706 aa12.96□□□□□ -0.34
TRAP1-212ENST00000575671 UMODL1-AS1Q8N2C9 162 aa12.96□□□□□ -0.34
TRAP1-212ENST00000575671 MYEOVQ96EZ4 313 aa12.96□□□□□ -0.34
TRAP1-212ENST00000575671 SGSM3Q96HU1 749 aa12.96□□□□□ -0.34
TRAP1-212ENST00000575671 CEP295NLQ96MC4 621 aa12.96□□□□□ -0.34
TRAP1-212ENST00000575671 ZNF317Q96PQ6 595 aaPredicted RBP12.96□□□□□ -0.34
TRAP1-212ENST00000575671 LRRC40Q9H9A6 602 aa12.96□□□□□ -0.34
TRAP1-212ENST00000575671 MRPL17Q9NRX2 175 aaKnown RBP12.96□□□□□ -0.34
TRAP1-212ENST00000575671 RBM22Q9NW64 420 aaKnown RBP eCLIP12.96□□□□□ -0.34
TRAP1-212ENST00000575671 IL1RAPL1Q9NZN1 696 aa12.96□□□□□ -0.34
TRAP1-212ENST00000575671 TRPM5Q9NZQ8 1165 aa12.96□□□□□ -0.34
TRAP1-212ENST00000575671 SMG5Q9UPR3 1016 aaKnown RBP12.96□□□□□ -0.34
TRAP1-212ENST00000575671 FAM159BA6NKW6 160 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 CSPG5O95196 566 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 HLA-DQB2P05538 268 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 SPATA31D3P0C874 917 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 TPH1P17752 444 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 HARS2P49590 506 aaKnown RBP12.95□□□□□ -0.34
TRAP1-212ENST00000575671 NDST2P52849 883 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 STEAP4Q687X5 459 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 RFWD3Q6PCD5 774 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 SPATA31D4Q6ZUB0 917 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 LRRC34Q8IZ02 419 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 CFAP52Q8N1V2 620 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 IL12RB2Q99665 862 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 KDM4CQ9H3R0 1056 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 CCDC134Q9H6E4 229 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 DONSONQ9NYP3 566 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 BFARQ9NZS9 450 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 SLC17A6Q9P2U8 582 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 HBS1LQ9Y450 684 aaKnown RBP12.95□□□□□ -0.34
TRAP1-212ENST00000575671 RPS6KL1Q9Y6S9 549 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 TCP11X1B4DZS4 312 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 F5H5T6 163 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 J3KR12 359 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 ATP9BO43861 1147 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 BAIAP3O94812 1187 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 POLBP06746 335 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 TACR2P21452 398 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 OR1E1P30953 314 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 WDR4P57081 412 aaKnown RBP12.95□□□□□ -0.34
TRAP1-212ENST00000575671 BMPR2Q13873 1038 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 RAB33AQ14088 237 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 CERCAMQ5T4B2 595 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 TTC39BQ5VTQ0 682 aaPredicted RBP12.95□□□□□ -0.34
TRAP1-212ENST00000575671 LRRC49Q8IUZ0 686 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 CCNJLQ8IV13 435 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 DENND1CQ8IV53 801 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 LGI2Q8N0V4 545 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 CCDC197Q8NCU1 140 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 IPMKQ8NFU5 416 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 OVCA2Q8WZ82 227 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 PABPC5Q96DU9 382 aaKnown RBP12.95□□□□□ -0.34
TRAP1-212ENST00000575671 SERAC1Q96JX3 654 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 NAT9Q9BTE0 207 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 CXorf56Q9H5V9 222 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 GLOD4Q9HC38 313 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 IL23AQ9NPF7 189 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 CASS4Q9NQ75 786 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 MOCS1Q9NZB8 636 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 PCDHB12Q9Y5F1 795 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 DOCK4Q8N1I0 1966 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 BPTFQ12830 3046 aa12.95□□□□□ -0.34
TRAP1-212ENST00000575671 C2orf78A6NCI8 922 aa12.94□□□□□ -0.34
TRAP1-212ENST00000575671 TRIM49D1C9J1S8 452 aa12.94□□□□□ -0.34
TRAP1-212ENST00000575671 TEX28O15482 410 aa12.94□□□□□ -0.34
TRAP1-212ENST00000575671 TYROBPO43914 113 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms