RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 OPHN1O60890 802 aa16.12■□□□□ 0.17
USB1-208ENST00000563207 NDUFA10O95299 355 aa16.12■□□□□ 0.17
USB1-208ENST00000563207 ACADMP11310 421 aa16.12■□□□□ 0.17
USB1-208ENST00000563207 DPP6P42658 865 aa16.12■□□□□ 0.17
USB1-208ENST00000563207 MAGEA1P43355 309 aa16.12■□□□□ 0.17
USB1-208ENST00000563207 RPS14P62263 151 aaKnown RBP16.12■□□□□ 0.17
USB1-208ENST00000563207 SIM1P81133 766 aaPredicted RBP16.12■□□□□ 0.17
USB1-208ENST00000563207 ATP11AP98196 1134 aa16.12■□□□□ 0.17
USB1-208ENST00000563207 MS4A13Q5J8X5 152 aa16.12■□□□□ 0.17
USB1-208ENST00000563207 SYCP2LQ5T4T6 812 aa16.12■□□□□ 0.17
USB1-208ENST00000563207 OTUD1Q5VV17 481 aaPredicted RBP16.12■□□□□ 0.17
USB1-208ENST00000563207 RAP1GAP2Q684P5 730 aa16.12■□□□□ 0.17
USB1-208ENST00000563207 CIR1Q86X95 450 aaPredicted RBP16.12■□□□□ 0.17
USB1-208ENST00000563207 DNAAF5Q86Y56 855 aa16.12■□□□□ 0.17
USB1-208ENST00000563207 TMEM139Q8IV31 216 aa16.12■□□□□ 0.17
USB1-208ENST00000563207 MFN1Q8IWA4 741 aa16.12■□□□□ 0.17
USB1-208ENST00000563207 RHOT2Q8IXI1 618 aa16.12■□□□□ 0.17
USB1-208ENST00000563207 AHI1Q8N157 1196 aa16.12■□□□□ 0.17
USB1-208ENST00000563207 TXLNBQ8N3L3 684 aa16.12■□□□□ 0.17
USB1-208ENST00000563207 C1orf216Q8TAB5 229 aa16.12■□□□□ 0.17
USB1-208ENST00000563207 WFIKKN2Q8TEU8 576 aa16.12■□□□□ 0.17
USB1-208ENST00000563207 MRGPRX3Q96LB0 322 aa16.12■□□□□ 0.17
USB1-208ENST00000563207 TMEM121BQ9BXQ6 578 aaPredicted RBP16.12■□□□□ 0.17
USB1-208ENST00000563207 PIGVQ9NUD9 493 aa16.12■□□□□ 0.17
USB1-208ENST00000563207 ARHGEF38Q9NXL2 777 aa16.12■□□□□ 0.17
USB1-208ENST00000563207 PLA2G4CQ9UP65 541 aa16.12■□□□□ 0.17
USB1-208ENST00000563207 SYNJ2BP-COX16A0A087WUM0 186 aa16.11■□□□□ 0.17
USB1-208ENST00000563207 SOWAHDA6NJG2 315 aa16.11■□□□□ 0.17
USB1-208ENST00000563207 MYO1FO00160 1098 aa16.11■□□□□ 0.17
USB1-208ENST00000563207 RNF8O76064 485 aa16.11■□□□□ 0.17
USB1-208ENST00000563207 GJB6O95452 261 aa16.11■□□□□ 0.17
USB1-208ENST00000563207 DLDP09622 509 aaKnown RBP16.11■□□□□ 0.17
USB1-208ENST00000563207 CSKP41240 450 aa16.11■□□□□ 0.17
USB1-208ENST00000563207 AIF1P55008 147 aa16.11■□□□□ 0.17
USB1-208ENST00000563207 KRT83P78385 493 aa16.11■□□□□ 0.17
USB1-208ENST00000563207 PIGHQ14442 188 aaPredicted RBP16.11■□□□□ 0.17
USB1-208ENST00000563207 TCEAL1Q15170 157 aa16.11■□□□□ 0.17
USB1-208ENST00000563207 ARL13BQ3SXY8 428 aa16.11■□□□□ 0.17
USB1-208ENST00000563207 WDR45BQ5MNZ6 344 aa16.11■□□□□ 0.17
USB1-208ENST00000563207 LAYNQ6UX15 382 aa16.11■□□□□ 0.17
USB1-208ENST00000563207 LGI2Q8N0V4 545 aa16.11■□□□□ 0.17
USB1-208ENST00000563207 HDDC3Q8N4P3 179 aa16.11■□□□□ 0.17
USB1-208ENST00000563207 FIBINQ8TAL6 211 aa16.11■□□□□ 0.17
USB1-208ENST00000563207 FAM172AQ8WUF8 416 aa16.11■□□□□ 0.17
USB1-208ENST00000563207 FOXJ1Q92949 421 aa16.11■□□□□ 0.17
USB1-208ENST00000563207 CALR3Q96L12 384 aaKnown RBP16.11■□□□□ 0.17
USB1-208ENST00000563207 C1orf74Q96LT6 269 aa16.11■□□□□ 0.17
USB1-208ENST00000563207 HAPLN3Q96S86 360 aa16.11■□□□□ 0.17
USB1-208ENST00000563207 NUP85Q9BW27 656 aa16.11■□□□□ 0.17
USB1-208ENST00000563207 ADAM33Q9BZ11 813 aa16.11■□□□□ 0.17
USB1-208ENST00000563207 DNAAF2Q9NVR5 837 aaKnown RBP16.11■□□□□ 0.17
USB1-208ENST00000563207 COX16Q9P0S2 106 aa16.11■□□□□ 0.17
USB1-208ENST00000563207 SERGEFQ9UGK8 458 aa16.11■□□□□ 0.17
USB1-208ENST00000563207 IP6K2Q9UHH9 426 aa16.11■□□□□ 0.17
USB1-208ENST00000563207 KLK13Q9UKR3 277 aa16.11■□□□□ 0.17
USB1-208ENST00000563207 PLXNA2O75051 1894 aa16.1■□□□□ 0.17
USB1-208ENST00000563207 NYNRINQ9P2P1 1898 aaKnown RBP16.1■□□□□ 0.17
USB1-208ENST00000563207 A0A1B0GTW7 788 aa16.1■□□□□ 0.17
USB1-208ENST00000563207 POLR2EP19388 210 aaKnown RBP16.1■□□□□ 0.17
USB1-208ENST00000563207 TFE3P19532 575 aaPredicted RBP16.1■□□□□ 0.17
USB1-208ENST00000563207 PSMA2P25787 234 aa16.1■□□□□ 0.17
USB1-208ENST00000563207 CSNK1EP49674 416 aaKnown RBP16.1■□□□□ 0.17
USB1-208ENST00000563207 IRAK1P51617 712 aa16.1■□□□□ 0.17
USB1-208ENST00000563207 CDO1Q16878 200 aa16.1■□□□□ 0.17
USB1-208ENST00000563207 C15orf59Q2T9L4 293 aaPredicted RBP16.1■□□□□ 0.17
USB1-208ENST00000563207 KCNT1Q5JUK3 1230 aa16.1■□□□□ 0.17
USB1-208ENST00000563207 MPP7Q5T2T1 576 aa16.1■□□□□ 0.17
USB1-208ENST00000563207 LRRC8AQ8IWT6 810 aa16.1■□□□□ 0.17
USB1-208ENST00000563207 APCDD1Q8J025 514 aa16.1■□□□□ 0.17
USB1-208ENST00000563207 NIPA2Q8N8Q9 360 aa16.1■□□□□ 0.17
USB1-208ENST00000563207 ZNF557Q8N988 423 aaPredicted RBP16.1■□□□□ 0.17
USB1-208ENST00000563207 HJURPQ8NCD3 748 aaPredicted RBP16.1■□□□□ 0.17
USB1-208ENST00000563207 CADM4Q8NFZ8 388 aa16.1■□□□□ 0.17
USB1-208ENST00000563207 ZNF564Q8TBZ8 553 aaPredicted RBP16.1■□□□□ 0.17
USB1-208ENST00000563207 SNX19Q92543 992 aa16.1■□□□□ 0.17
USB1-208ENST00000563207 NTAN1Q96AB6 310 aa16.1■□□□□ 0.17
USB1-208ENST00000563207 ARHGEF26Q96DR7 871 aa16.1■□□□□ 0.17
USB1-208ENST00000563207 PACSIN1Q9BY11 444 aa16.1■□□□□ 0.17
USB1-208ENST00000563207 TKTL2Q9H0I9 626 aa16.1■□□□□ 0.17
USB1-208ENST00000563207 CTTNBP2NLQ9P2B4 639 aa16.1■□□□□ 0.17
USB1-208ENST00000563207 SLCO3A1Q9UIG8 710 aa16.1■□□□□ 0.17
USB1-208ENST00000563207 PCDHA13Q9Y5I0 950 aa16.1■□□□□ 0.17
USB1-208ENST00000563207 A0A1B0GVT2 93 aa16.09■□□□□ 0.17
USB1-208ENST00000563207 TYW5A2RUC4 315 aaKnown RBP16.09■□□□□ 0.17
USB1-208ENST00000563207 TTC34A8MYJ7 566 aa16.09■□□□□ 0.17
USB1-208ENST00000563207 UPK3BL1B0FP48 263 aa16.09■□□□□ 0.17
USB1-208ENST00000563207 UPK3BL2E5RIL1 263 aa16.09■□□□□ 0.17
USB1-208ENST00000563207 KCNK3O14649 394 aa16.09■□□□□ 0.17
USB1-208ENST00000563207 BCAT2O15382 392 aaPredicted RBP16.09■□□□□ 0.17
USB1-208ENST00000563207 ARHGAP6O43182 974 aa16.09■□□□□ 0.17
USB1-208ENST00000563207 CCP110O43303 1012 aa16.09■□□□□ 0.17
USB1-208ENST00000563207 SIN3BO75182 1162 aa16.09■□□□□ 0.17
USB1-208ENST00000563207 MTA2O94776 668 aa16.09■□□□□ 0.17
USB1-208ENST00000563207 SYPP08247 313 aa16.09■□□□□ 0.17
USB1-208ENST00000563207 GNSP15586 552 aa16.09■□□□□ 0.17
USB1-208ENST00000563207 OXTRP30559 389 aa16.09■□□□□ 0.17
USB1-208ENST00000563207 PCK1P35558 622 aa16.09■□□□□ 0.17
USB1-208ENST00000563207 ARHGAP25P42331 645 aa16.09■□□□□ 0.17
USB1-208ENST00000563207 HDAC4P56524 1084 aa16.09■□□□□ 0.17
USB1-208ENST00000563207 PITRM1Q5JRX3 1037 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms